Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03143

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_03141 and MPMX26_03142 are separated by 102 nucleotidesMPMX26_03142 and MPMX26_03143 are separated by 528 nucleotidesMPMX26_03143 and MPMX26_03144 are separated by 140 nucleotidesMPMX26_03144 and MPMX26_03145 are separated by 163 nucleotides MPMX26_03141: MPMX26_03141 - hypothetical protein, at 1 to 948 _03141 MPMX26_03142: MPMX26_03142 - hypothetical protein, at 1,051 to 1,371 _03142 MPMX26_03143: MPMX26_03143 - DNA primase TraC, at 1,900 to 2,763 _03143 MPMX26_03144: MPMX26_03144 - hypothetical protein, at 2,904 to 3,188 _03144 MPMX26_03145: MPMX26_03145 - hypothetical protein, at 3,352 to 3,825 _03145 Position (kb) 1 2 3Strain fitness (log2 ratio) -2 -1 0 1 2 3at 0.916 kb on + strandat 0.926 kb on + strandat 0.957 kb on - strandat 1.039 kb on + strandat 1.049 kb on - strandat 1.258 kb on + strand, within MPMX26_03142at 1.258 kb on + strand, within MPMX26_03142at 1.258 kb on + strand, within MPMX26_03142at 1.258 kb on + strand, within MPMX26_03142at 1.258 kb on + strand, within MPMX26_03142at 1.258 kb on + strand, within MPMX26_03142at 1.266 kb on - strand, within MPMX26_03142at 1.268 kb on + strand, within MPMX26_03142at 1.297 kb on - strand, within MPMX26_03142at 1.319 kb on - strand, within MPMX26_03142at 1.403 kb on + strandat 1.408 kb on + strandat 1.408 kb on + strandat 1.408 kb on + strandat 1.526 kb on + strandat 1.526 kb on + strandat 1.526 kb on + strandat 1.526 kb on + strandat 1.526 kb on + strandat 1.526 kb on + strandat 1.526 kb on + strandat 1.527 kb on + strandat 1.527 kb on - strandat 1.527 kb on - strandat 1.527 kb on - strandat 1.527 kb on - strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.534 kb on - strandat 1.534 kb on - strandat 1.534 kb on - strandat 1.534 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.609 kb on - strandat 1.627 kb on + strandat 1.660 kb on + strandat 1.762 kb on + strandat 1.773 kb on + strandat 1.778 kb on + strandat 1.778 kb on + strandat 1.778 kb on + strandat 1.781 kb on - strandat 1.786 kb on - strandat 1.786 kb on - strandat 1.790 kb on - strandat 1.981 kb on - strandat 1.996 kb on - strand, within MPMX26_03143at 2.161 kb on + strand, within MPMX26_03143at 2.202 kb on + strand, within MPMX26_03143at 2.274 kb on + strand, within MPMX26_03143at 2.290 kb on + strand, within MPMX26_03143at 2.360 kb on + strand, within MPMX26_03143at 2.360 kb on + strand, within MPMX26_03143at 2.381 kb on + strand, within MPMX26_03143at 2.386 kb on + strand, within MPMX26_03143at 2.386 kb on + strand, within MPMX26_03143at 2.386 kb on + strand, within MPMX26_03143at 2.386 kb on + strand, within MPMX26_03143at 2.386 kb on + strand, within MPMX26_03143at 2.420 kb on + strand, within MPMX26_03143at 2.488 kb on + strand, within MPMX26_03143at 2.488 kb on + strand, within MPMX26_03143at 2.488 kb on + strand, within MPMX26_03143at 2.488 kb on + strand, within MPMX26_03143at 2.496 kb on - strand, within MPMX26_03143at 2.508 kb on + strand, within MPMX26_03143at 2.568 kb on + strand, within MPMX26_03143at 2.568 kb on + strand, within MPMX26_03143at 2.568 kb on + strand, within MPMX26_03143at 2.568 kb on + strand, within MPMX26_03143at 2.568 kb on + strand, within MPMX26_03143at 2.568 kb on + strand, within MPMX26_03143at 2.568 kb on + strand, within MPMX26_03143at 2.568 kb on + strand, within MPMX26_03143at 2.568 kb on + strand, within MPMX26_03143at 2.568 kb on + strand, within MPMX26_03143at 2.568 kb on + strand, within MPMX26_03143at 2.568 kb on + strand, within MPMX26_03143at 2.596 kb on + strand, within MPMX26_03143at 2.608 kb on + strand, within MPMX26_03143at 2.608 kb on + strand, within MPMX26_03143at 2.608 kb on + strand, within MPMX26_03143at 2.608 kb on + strand, within MPMX26_03143at 2.608 kb on + strand, within MPMX26_03143at 2.610 kb on + strand, within MPMX26_03143at 2.747 kb on + strandat 2.752 kb on + strandat 2.981 kb on + strand, within MPMX26_03144at 2.981 kb on + strand, within MPMX26_03144at 2.981 kb on + strand, within MPMX26_03144at 2.982 kb on - strand, within MPMX26_03144at 3.030 kb on + strand, within MPMX26_03144at 3.036 kb on + strand, within MPMX26_03144at 3.041 kb on + strand, within MPMX26_03144at 3.118 kb on + strand, within MPMX26_03144at 3.118 kb on + strand, within MPMX26_03144at 3.217 kb on + strandat 3.217 kb on + strandat 3.217 kb on + strandat 3.217 kb on + strandat 3.217 kb on + strandat 3.217 kb on + strandat 3.217 kb on + strandat 3.217 kb on + strandat 3.217 kb on + strandat 3.227 kb on + strandat 3.397 kb on + strandat 3.397 kb on + strandat 3.397 kb on + strandat 3.472 kb on + strand, within MPMX26_03145at 3.486 kb on - strand, within MPMX26_03145at 3.490 kb on - strand, within MPMX26_03145at 3.490 kb on - strand, within MPMX26_03145at 3.585 kb on + strand, within MPMX26_03145at 3.602 kb on + strand, within MPMX26_03145at 3.624 kb on + strand, within MPMX26_03145at 3.624 kb on + strand, within MPMX26_03145at 3.624 kb on + strand, within MPMX26_03145at 3.624 kb on + strand, within MPMX26_03145at 3.632 kb on + strand, within MPMX26_03145at 3.632 kb on + strand, within MPMX26_03145at 3.634 kb on + strand, within MPMX26_03145at 3.682 kb on + strand, within MPMX26_03145at 3.682 kb on + strand, within MPMX26_03145at 3.711 kb on + strand, within MPMX26_03145at 3.711 kb on + strand, within MPMX26_03145at 3.729 kb on + strand, within MPMX26_03145

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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916 + +0.3
926 + -0.8
957 - +0.3
1,039 + -1.2
1,049 - +0.1
1,258 + MPMX26_03142 0.64 -0.0
1,258 + MPMX26_03142 0.64 -0.4
1,258 + MPMX26_03142 0.64 +1.5
1,258 + MPMX26_03142 0.64 +1.0
1,258 + MPMX26_03142 0.64 +1.5
1,258 + MPMX26_03142 0.64 -0.0
1,266 - MPMX26_03142 0.67 -0.7
1,268 + MPMX26_03142 0.68 +0.2
1,297 - MPMX26_03142 0.77 -0.2
1,319 - MPMX26_03142 0.83 +0.2
1,403 + -1.7
1,408 + +0.4
1,408 + -0.5
1,408 + +0.3
1,526 + -0.4
1,526 + +0.2
1,526 + +0.1
1,526 + +1.2
1,526 + -0.4
1,526 + +0.5
1,526 + -0.5
1,527 + +0.9
1,527 - +1.2
1,527 - +0.3
1,527 - +0.9
1,527 - -1.1
1,529 + -0.9
1,529 + -0.0
1,529 + +1.4
1,529 + -0.7
1,529 + +0.1
1,529 + -1.7
1,529 + -0.5
1,529 + +1.2
1,529 + -1.1
1,529 + -1.0
1,529 + +0.1
1,529 + -0.2
1,529 + +0.1
1,529 + +2.5
1,529 + -1.3
1,529 + -0.5
1,529 + -0.2
1,529 + -1.2
1,529 + -0.7
1,529 + +0.3
1,529 + +0.4
1,529 + -0.3
1,529 + +0.5
1,529 + +0.8
1,529 + -0.0
1,529 + -0.2
1,529 + -0.6
1,529 + +0.7
1,529 + +0.3
1,529 + -0.3
1,529 + -0.2
1,529 + -0.1
1,529 + +0.4
1,529 + +0.6
1,529 + +0.1
1,529 + +0.8
1,529 + -1.3
1,529 + +0.9
1,529 + +1.9
1,529 + -0.5
1,529 + -0.7
1,529 + -0.8
1,529 + -0.6
1,529 + +2.4
1,534 - -0.0
1,534 - -0.4
1,534 - +0.3
1,534 - +2.5
1,537 - +0.4
1,537 - +0.2
1,537 - -0.8
1,537 - +0.3
1,537 - +1.1
1,537 - -1.2
1,537 - -0.3
1,537 - +0.2
1,537 - -0.1
1,537 - -0.2
1,537 - +0.2
1,537 - -0.3
1,537 - -0.5
1,537 - -0.2
1,537 - +0.5
1,537 - -0.1
1,537 - +2.9
1,537 - +0.5
1,537 - -1.8
1,537 - +1.1
1,537 - -0.2
1,537 - +0.7
1,537 - +0.9
1,537 - +0.7
1,537 - +0.7
1,537 - -0.1
1,537 - -0.2
1,537 - +1.0
1,537 - -0.1
1,537 - +0.1
1,537 - +0.4
1,537 - -0.7
1,537 - -1.7
1,537 - -0.8
1,537 - +1.5
1,537 - +0.0
1,537 - -0.8
1,537 - +0.0
1,537 - +0.5
1,537 - +1.5
1,537 - +1.2
1,537 - -1.9
1,537 - +1.1
1,537 - -1.7
1,537 - -0.7
1,537 - +1.3
1,537 - -0.3
1,537 - -1.3
1,537 - +0.3
1,609 - -0.2
1,627 + +0.6
1,660 + +0.1
1,762 + -1.5
1,773 + -0.6
1,778 + -0.4
1,778 + +0.5
1,778 + -0.0
1,781 - -1.7
1,786 - -0.1
1,786 - +0.2
1,790 - -0.9
1,981 - -1.3
1,996 - MPMX26_03143 0.11 -0.4
2,161 + MPMX26_03143 0.30 +0.6
2,202 + MPMX26_03143 0.35 -0.1
2,274 + MPMX26_03143 0.43 -0.1
2,290 + MPMX26_03143 0.45 -0.1
2,360 + MPMX26_03143 0.53 +0.1
2,360 + MPMX26_03143 0.53 -0.2
2,381 + MPMX26_03143 0.56 +1.1
2,386 + MPMX26_03143 0.56 +1.1
2,386 + MPMX26_03143 0.56 -0.3
2,386 + MPMX26_03143 0.56 +0.1
2,386 + MPMX26_03143 0.56 +0.2
2,386 + MPMX26_03143 0.56 +0.1
2,420 + MPMX26_03143 0.60 +0.1
2,488 + MPMX26_03143 0.68 +0.4
2,488 + MPMX26_03143 0.68 -0.5
2,488 + MPMX26_03143 0.68 -0.1
2,488 + MPMX26_03143 0.68 +0.7
2,496 - MPMX26_03143 0.69 +0.5
2,508 + MPMX26_03143 0.70 -0.9
2,568 + MPMX26_03143 0.77 +0.2
2,568 + MPMX26_03143 0.77 +0.2
2,568 + MPMX26_03143 0.77 +0.0
2,568 + MPMX26_03143 0.77 +0.6
2,568 + MPMX26_03143 0.77 +0.0
2,568 + MPMX26_03143 0.77 +1.6
2,568 + MPMX26_03143 0.77 +0.1
2,568 + MPMX26_03143 0.77 +0.3
2,568 + MPMX26_03143 0.77 -0.8
2,568 + MPMX26_03143 0.77 +1.0
2,568 + MPMX26_03143 0.77 -0.9
2,568 + MPMX26_03143 0.77 +0.7
2,596 + MPMX26_03143 0.81 +0.7
2,608 + MPMX26_03143 0.82 +0.1
2,608 + MPMX26_03143 0.82 -0.6
2,608 + MPMX26_03143 0.82 +1.1
2,608 + MPMX26_03143 0.82 +0.0
2,608 + MPMX26_03143 0.82 -0.8
2,610 + MPMX26_03143 0.82 -1.3
2,747 + -1.7
2,752 + +0.2
2,981 + MPMX26_03144 0.27 -0.1
2,981 + MPMX26_03144 0.27 -0.4
2,981 + MPMX26_03144 0.27 +0.9
2,982 - MPMX26_03144 0.27 -0.2
3,030 + MPMX26_03144 0.44 -0.5
3,036 + MPMX26_03144 0.46 -0.0
3,041 + MPMX26_03144 0.48 +0.5
3,118 + MPMX26_03144 0.75 +0.1
3,118 + MPMX26_03144 0.75 -0.1
3,217 + +0.0
3,217 + +0.2
3,217 + -0.0
3,217 + +0.3
3,217 + -0.2
3,217 + +0.2
3,217 + -0.1
3,217 + +0.3
3,217 + -0.3
3,227 + -1.5
3,397 + -1.0
3,397 + -0.2
3,397 + +0.0
3,472 + MPMX26_03145 0.25 +0.1
3,486 - MPMX26_03145 0.28 +0.7
3,490 - MPMX26_03145 0.29 -1.3
3,490 - MPMX26_03145 0.29 +0.5
3,585 + MPMX26_03145 0.49 +0.3
3,602 + MPMX26_03145 0.53 -0.1
3,624 + MPMX26_03145 0.57 -0.2
3,624 + MPMX26_03145 0.57 -1.0
3,624 + MPMX26_03145 0.57 +0.7
3,624 + MPMX26_03145 0.57 +1.2
3,632 + MPMX26_03145 0.59 +0.8
3,632 + MPMX26_03145 0.59 +1.7
3,634 + MPMX26_03145 0.59 -0.7
3,682 + MPMX26_03145 0.70 -0.0
3,682 + MPMX26_03145 0.70 -0.3
3,711 + MPMX26_03145 0.76 +0.5
3,711 + MPMX26_03145 0.76 -1.3
3,729 + MPMX26_03145 0.80 -0.0

Or see this region's nucleotide sequence