Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03070

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_03069 and MPMX26_03070 are separated by 347 nucleotidesMPMX26_03070 and MPMX26_03071 are separated by 102 nucleotides MPMX26_03069: MPMX26_03069 - hypothetical protein, at 3,191,093 to 3,192,235 _03069 MPMX26_03070: MPMX26_03070 - tRNA modification GTPase MnmE, at 3,192,583 to 3,193,938 _03070 MPMX26_03071: MPMX26_03071 - Membrane protein insertase YidC, at 3,194,041 to 3,195,795 _03071 Position (kb) 3192 3193 3194Strain fitness (log2 ratio) -3 -2 -1 0 1at 3191.840 kb on - strand, within MPMX26_03069at 3191.864 kb on + strand, within MPMX26_03069at 3191.932 kb on + strand, within MPMX26_03069at 3191.990 kb on + strand, within MPMX26_03069at 3191.990 kb on + strand, within MPMX26_03069at 3191.990 kb on + strand, within MPMX26_03069at 3191.990 kb on + strand, within MPMX26_03069at 3192.002 kb on + strand, within MPMX26_03069at 3192.192 kb on + strandat 3192.632 kb on - strandat 3192.670 kb on - strandat 3192.683 kb on - strandat 3192.702 kb on - strandat 3192.702 kb on - strandat 3192.702 kb on - strandat 3192.702 kb on - strandat 3192.729 kb on - strand, within MPMX26_03070at 3192.734 kb on - strand, within MPMX26_03070at 3192.748 kb on - strand, within MPMX26_03070at 3192.758 kb on - strand, within MPMX26_03070at 3192.758 kb on - strand, within MPMX26_03070at 3192.851 kb on - strand, within MPMX26_03070at 3192.878 kb on - strand, within MPMX26_03070at 3192.922 kb on - strand, within MPMX26_03070at 3192.959 kb on - strand, within MPMX26_03070at 3193.017 kb on - strand, within MPMX26_03070at 3193.036 kb on - strand, within MPMX26_03070at 3193.042 kb on + strand, within MPMX26_03070at 3193.042 kb on - strand, within MPMX26_03070at 3193.042 kb on - strand, within MPMX26_03070at 3193.050 kb on - strand, within MPMX26_03070at 3193.050 kb on - strand, within MPMX26_03070at 3193.064 kb on - strand, within MPMX26_03070at 3193.086 kb on - strand, within MPMX26_03070at 3193.086 kb on - strand, within MPMX26_03070at 3193.086 kb on - strand, within MPMX26_03070at 3193.086 kb on - strand, within MPMX26_03070at 3193.127 kb on + strand, within MPMX26_03070at 3193.135 kb on - strand, within MPMX26_03070at 3193.149 kb on - strand, within MPMX26_03070at 3193.184 kb on - strand, within MPMX26_03070at 3193.184 kb on - strand, within MPMX26_03070at 3193.227 kb on - strand, within MPMX26_03070at 3193.227 kb on - strand, within MPMX26_03070at 3193.227 kb on - strand, within MPMX26_03070at 3193.227 kb on - strand, within MPMX26_03070at 3193.227 kb on - strand, within MPMX26_03070at 3193.243 kb on - strand, within MPMX26_03070at 3193.252 kb on - strand, within MPMX26_03070at 3193.252 kb on - strand, within MPMX26_03070at 3193.260 kb on - strand, within MPMX26_03070at 3193.284 kb on + strand, within MPMX26_03070at 3193.292 kb on - strand, within MPMX26_03070at 3193.292 kb on - strand, within MPMX26_03070at 3193.292 kb on - strand, within MPMX26_03070at 3193.292 kb on - strand, within MPMX26_03070at 3193.292 kb on - strand, within MPMX26_03070at 3193.293 kb on - strand, within MPMX26_03070at 3193.293 kb on - strand, within MPMX26_03070at 3193.293 kb on - strand, within MPMX26_03070at 3193.293 kb on - strand, within MPMX26_03070at 3193.293 kb on - strand, within MPMX26_03070at 3193.293 kb on - strand, within MPMX26_03070at 3193.293 kb on - strand, within MPMX26_03070at 3193.293 kb on - strand, within MPMX26_03070at 3193.293 kb on - strand, within MPMX26_03070at 3193.293 kb on - strand, within MPMX26_03070at 3193.312 kb on - strand, within MPMX26_03070at 3193.312 kb on - strand, within MPMX26_03070at 3193.312 kb on - strand, within MPMX26_03070at 3193.312 kb on - strand, within MPMX26_03070at 3193.312 kb on - strand, within MPMX26_03070at 3193.317 kb on - strand, within MPMX26_03070at 3193.322 kb on - strand, within MPMX26_03070at 3193.333 kb on - strand, within MPMX26_03070at 3193.337 kb on - strand, within MPMX26_03070at 3193.337 kb on - strand, within MPMX26_03070at 3193.351 kb on - strand, within MPMX26_03070at 3193.464 kb on - strand, within MPMX26_03070at 3193.474 kb on - strand, within MPMX26_03070at 3193.503 kb on + strand, within MPMX26_03070at 3193.511 kb on - strand, within MPMX26_03070at 3193.511 kb on - strand, within MPMX26_03070at 3193.514 kb on - strand, within MPMX26_03070at 3193.521 kb on - strand, within MPMX26_03070at 3193.521 kb on - strand, within MPMX26_03070at 3193.521 kb on - strand, within MPMX26_03070at 3193.523 kb on - strand, within MPMX26_03070at 3193.528 kb on - strand, within MPMX26_03070at 3193.531 kb on - strand, within MPMX26_03070at 3193.531 kb on - strand, within MPMX26_03070at 3193.531 kb on - strand, within MPMX26_03070at 3193.543 kb on - strand, within MPMX26_03070at 3193.543 kb on - strand, within MPMX26_03070at 3193.548 kb on - strand, within MPMX26_03070at 3193.556 kb on + strand, within MPMX26_03070at 3193.564 kb on - strand, within MPMX26_03070at 3193.564 kb on - strand, within MPMX26_03070at 3193.564 kb on - strand, within MPMX26_03070at 3193.564 kb on - strand, within MPMX26_03070at 3193.624 kb on - strand, within MPMX26_03070at 3193.636 kb on - strand, within MPMX26_03070at 3193.636 kb on - strand, within MPMX26_03070at 3193.637 kb on + strand, within MPMX26_03070at 3193.645 kb on - strand, within MPMX26_03070at 3193.646 kb on + strand, within MPMX26_03070at 3193.646 kb on + strand, within MPMX26_03070at 3193.654 kb on + strand, within MPMX26_03070at 3193.662 kb on - strand, within MPMX26_03070at 3193.682 kb on + strand, within MPMX26_03070at 3193.690 kb on - strand, within MPMX26_03070at 3193.696 kb on - strand, within MPMX26_03070at 3193.705 kb on + strand, within MPMX26_03070at 3193.757 kb on + strand, within MPMX26_03070at 3193.765 kb on - strand, within MPMX26_03070at 3193.768 kb on - strand, within MPMX26_03070at 3193.773 kb on - strand, within MPMX26_03070at 3193.773 kb on - strand, within MPMX26_03070at 3193.778 kb on + strand, within MPMX26_03070at 3193.778 kb on - strand, within MPMX26_03070at 3193.786 kb on - strand, within MPMX26_03070at 3193.796 kb on + strand, within MPMX26_03070at 3193.835 kb on - strandat 3193.835 kb on - strandat 3193.836 kb on - strandat 3193.836 kb on - strandat 3193.842 kb on - strandat 3193.854 kb on - strandat 3193.854 kb on - strandat 3193.870 kb on - strandat 3193.870 kb on - strandat 3193.886 kb on - strandat 3193.886 kb on - strandat 3193.886 kb on - strandat 3193.902 kb on - strandat 3193.902 kb on - strandat 3193.902 kb on - strandat 3193.906 kb on - strandat 3194.011 kb on - strandat 3194.011 kb on - strandat 3194.011 kb on - strandat 3194.057 kb on - strandat 3194.096 kb on - strandat 3194.096 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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3,191,840 - MPMX26_03069 0.65 -0.7
3,191,864 + MPMX26_03069 0.67 -0.2
3,191,932 + MPMX26_03069 0.73 -0.7
3,191,990 + MPMX26_03069 0.78 +0.5
3,191,990 + MPMX26_03069 0.78 +0.7
3,191,990 + MPMX26_03069 0.78 -0.4
3,191,990 + MPMX26_03069 0.78 -0.3
3,192,002 + MPMX26_03069 0.80 +0.5
3,192,192 + -0.3
3,192,632 - -2.0
3,192,670 - -0.9
3,192,683 - -1.6
3,192,702 - -2.6
3,192,702 - -1.0
3,192,702 - -1.3
3,192,702 - -1.0
3,192,729 - MPMX26_03070 0.11 -1.6
3,192,734 - MPMX26_03070 0.11 -2.7
3,192,748 - MPMX26_03070 0.12 -1.6
3,192,758 - MPMX26_03070 0.13 -1.5
3,192,758 - MPMX26_03070 0.13 -2.1
3,192,851 - MPMX26_03070 0.20 -0.3
3,192,878 - MPMX26_03070 0.22 -2.2
3,192,922 - MPMX26_03070 0.25 -1.2
3,192,959 - MPMX26_03070 0.28 -0.7
3,193,017 - MPMX26_03070 0.32 -1.7
3,193,036 - MPMX26_03070 0.33 -1.7
3,193,042 + MPMX26_03070 0.34 +0.6
3,193,042 - MPMX26_03070 0.34 -0.1
3,193,042 - MPMX26_03070 0.34 +0.7
3,193,050 - MPMX26_03070 0.34 -0.7
3,193,050 - MPMX26_03070 0.34 -2.8
3,193,064 - MPMX26_03070 0.35 -1.7
3,193,086 - MPMX26_03070 0.37 -2.1
3,193,086 - MPMX26_03070 0.37 -0.6
3,193,086 - MPMX26_03070 0.37 -1.3
3,193,086 - MPMX26_03070 0.37 -1.7
3,193,127 + MPMX26_03070 0.40 +0.0
3,193,135 - MPMX26_03070 0.41 -2.0
3,193,149 - MPMX26_03070 0.42 -1.2
3,193,184 - MPMX26_03070 0.44 -1.3
3,193,184 - MPMX26_03070 0.44 -1.2
3,193,227 - MPMX26_03070 0.47 -1.9
3,193,227 - MPMX26_03070 0.47 -0.5
3,193,227 - MPMX26_03070 0.47 -0.6
3,193,227 - MPMX26_03070 0.47 -0.4
3,193,227 - MPMX26_03070 0.47 -3.7
3,193,243 - MPMX26_03070 0.49 -1.5
3,193,252 - MPMX26_03070 0.49 +0.3
3,193,252 - MPMX26_03070 0.49 -1.1
3,193,260 - MPMX26_03070 0.50 -0.6
3,193,284 + MPMX26_03070 0.52 +0.3
3,193,292 - MPMX26_03070 0.52 -1.5
3,193,292 - MPMX26_03070 0.52 -1.8
3,193,292 - MPMX26_03070 0.52 -1.5
3,193,292 - MPMX26_03070 0.52 -1.3
3,193,292 - MPMX26_03070 0.52 -3.0
3,193,293 - MPMX26_03070 0.52 -1.2
3,193,293 - MPMX26_03070 0.52 -1.1
3,193,293 - MPMX26_03070 0.52 -2.7
3,193,293 - MPMX26_03070 0.52 -1.7
3,193,293 - MPMX26_03070 0.52 -1.8
3,193,293 - MPMX26_03070 0.52 -0.7
3,193,293 - MPMX26_03070 0.52 -0.7
3,193,293 - MPMX26_03070 0.52 -2.4
3,193,293 - MPMX26_03070 0.52 -1.0
3,193,293 - MPMX26_03070 0.52 +0.2
3,193,312 - MPMX26_03070 0.54 -0.4
3,193,312 - MPMX26_03070 0.54 -1.7
3,193,312 - MPMX26_03070 0.54 -2.0
3,193,312 - MPMX26_03070 0.54 -2.1
3,193,312 - MPMX26_03070 0.54 -2.2
3,193,317 - MPMX26_03070 0.54 -1.1
3,193,322 - MPMX26_03070 0.54 -2.2
3,193,333 - MPMX26_03070 0.55 -1.8
3,193,337 - MPMX26_03070 0.56 -0.5
3,193,337 - MPMX26_03070 0.56 -1.9
3,193,351 - MPMX26_03070 0.57 -2.1
3,193,464 - MPMX26_03070 0.65 -1.6
3,193,474 - MPMX26_03070 0.66 -1.5
3,193,503 + MPMX26_03070 0.68 -0.4
3,193,511 - MPMX26_03070 0.68 -2.4
3,193,511 - MPMX26_03070 0.68 +0.2
3,193,514 - MPMX26_03070 0.69 -1.1
3,193,521 - MPMX26_03070 0.69 -2.5
3,193,521 - MPMX26_03070 0.69 -1.2
3,193,521 - MPMX26_03070 0.69 -1.9
3,193,523 - MPMX26_03070 0.69 -3.0
3,193,528 - MPMX26_03070 0.70 -0.8
3,193,531 - MPMX26_03070 0.70 -2.0
3,193,531 - MPMX26_03070 0.70 -1.7
3,193,531 - MPMX26_03070 0.70 -2.3
3,193,543 - MPMX26_03070 0.71 +1.6
3,193,543 - MPMX26_03070 0.71 -1.7
3,193,548 - MPMX26_03070 0.71 -1.3
3,193,556 + MPMX26_03070 0.72 +1.6
3,193,564 - MPMX26_03070 0.72 -0.4
3,193,564 - MPMX26_03070 0.72 -2.7
3,193,564 - MPMX26_03070 0.72 -1.0
3,193,564 - MPMX26_03070 0.72 -1.2
3,193,624 - MPMX26_03070 0.77 -0.7
3,193,636 - MPMX26_03070 0.78 -2.3
3,193,636 - MPMX26_03070 0.78 -1.7
3,193,637 + MPMX26_03070 0.78 -0.7
3,193,645 - MPMX26_03070 0.78 -1.2
3,193,646 + MPMX26_03070 0.78 -2.9
3,193,646 + MPMX26_03070 0.78 -2.0
3,193,654 + MPMX26_03070 0.79 -1.2
3,193,662 - MPMX26_03070 0.80 -1.5
3,193,682 + MPMX26_03070 0.81 -1.7
3,193,690 - MPMX26_03070 0.82 -1.4
3,193,696 - MPMX26_03070 0.82 -0.4
3,193,705 + MPMX26_03070 0.83 -1.5
3,193,757 + MPMX26_03070 0.87 +0.0
3,193,765 - MPMX26_03070 0.87 -0.2
3,193,768 - MPMX26_03070 0.87 -2.1
3,193,773 - MPMX26_03070 0.88 -1.6
3,193,773 - MPMX26_03070 0.88 -2.1
3,193,778 + MPMX26_03070 0.88 +0.3
3,193,778 - MPMX26_03070 0.88 -1.5
3,193,786 - MPMX26_03070 0.89 -1.0
3,193,796 + MPMX26_03070 0.89 +0.3
3,193,835 - +0.0
3,193,835 - -0.4
3,193,836 - -1.5
3,193,836 - -0.9
3,193,842 - -1.5
3,193,854 - -2.5
3,193,854 - +0.0
3,193,870 - -1.7
3,193,870 - -1.4
3,193,886 - -0.2
3,193,886 - +0.0
3,193,886 - -1.6
3,193,902 - -1.2
3,193,902 - -1.6
3,193,902 - -2.2
3,193,906 - -1.3
3,194,011 - -0.1
3,194,011 - -0.6
3,194,011 - -0.9
3,194,057 - +0.1
3,194,096 - -0.7
3,194,096 - -0.7

Or see this region's nucleotide sequence