Experiment: UV exposure at 150J/m2 for 20 seconds
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02874 and MPMX26_02875 are separated by 20 nucleotides MPMX26_02875 and MPMX26_02876 are separated by 32 nucleotides MPMX26_02876 and MPMX26_02877 are separated by 436 nucleotides
MPMX26_02874: MPMX26_02874 - hypothetical protein, at 2,971,334 to 2,972,365
_02874
MPMX26_02875: MPMX26_02875 - hypothetical protein, at 2,972,386 to 2,972,736
_02875
MPMX26_02876: MPMX26_02876 - hypothetical protein, at 2,972,769 to 2,973,638
_02876
MPMX26_02877: MPMX26_02877 - hypothetical protein, at 2,974,075 to 2,976,522
_02877
Position (kb)
2972
2973
2974 Strain fitness (log2 ratio)
-1
0
1 at 2971.813 kb on - strand, within MPMX26_02874 at 2971.838 kb on - strand, within MPMX26_02874 at 2971.846 kb on - strand, within MPMX26_02874 at 2971.887 kb on + strand, within MPMX26_02874 at 2971.887 kb on - strand, within MPMX26_02874 at 2971.939 kb on - strand, within MPMX26_02874 at 2971.987 kb on - strand, within MPMX26_02874 at 2972.137 kb on - strand, within MPMX26_02874 at 2972.307 kb on - strand at 2972.555 kb on - strand, within MPMX26_02875 at 2972.583 kb on - strand, within MPMX26_02875 at 2972.698 kb on - strand, within MPMX26_02875 at 2972.715 kb on - strand at 2972.792 kb on - strand at 2972.842 kb on - strand at 2972.859 kb on - strand, within MPMX26_02876 at 2972.947 kb on - strand, within MPMX26_02876 at 2973.157 kb on - strand, within MPMX26_02876 at 2973.282 kb on + strand, within MPMX26_02876 at 2973.502 kb on - strand, within MPMX26_02876 at 2973.564 kb on - strand at 2974.083 kb on - strand at 2974.089 kb on - strand at 2974.089 kb on - strand at 2974.089 kb on - strand at 2974.122 kb on - strand at 2974.122 kb on - strand at 2974.122 kb on - strand at 2974.122 kb on - strand at 2974.201 kb on - strand at 2974.201 kb on - strand at 2974.209 kb on - strand at 2974.280 kb on + strand at 2974.307 kb on - strand at 2974.332 kb on + strand, within MPMX26_02877 at 2974.337 kb on + strand, within MPMX26_02877 at 2974.337 kb on + strand, within MPMX26_02877 at 2974.337 kb on + strand, within MPMX26_02877 at 2974.345 kb on - strand, within MPMX26_02877 at 2974.345 kb on - strand, within MPMX26_02877 at 2974.345 kb on - strand, within MPMX26_02877 at 2974.345 kb on - strand, within MPMX26_02877 at 2974.345 kb on - strand, within MPMX26_02877 at 2974.345 kb on - strand, within MPMX26_02877 at 2974.345 kb on - strand, within MPMX26_02877 at 2974.345 kb on - strand, within MPMX26_02877 at 2974.489 kb on - strand, within MPMX26_02877 at 2974.489 kb on - strand, within MPMX26_02877 at 2974.489 kb on - strand, within MPMX26_02877 at 2974.489 kb on - strand, within MPMX26_02877 at 2974.489 kb on - strand, within MPMX26_02877 at 2974.489 kb on - strand, within MPMX26_02877 at 2974.492 kb on - strand, within MPMX26_02877 at 2974.492 kb on - strand, within MPMX26_02877 at 2974.492 kb on - strand, within MPMX26_02877 at 2974.492 kb on - strand, within MPMX26_02877 at 2974.492 kb on - strand, within MPMX26_02877 at 2974.549 kb on - strand, within MPMX26_02877 at 2974.588 kb on - strand, within MPMX26_02877 at 2974.589 kb on - strand, within MPMX26_02877 at 2974.589 kb on - strand, within MPMX26_02877 at 2974.589 kb on - strand, within MPMX26_02877 at 2974.589 kb on - strand, within MPMX26_02877 at 2974.598 kb on - strand, within MPMX26_02877 at 2974.638 kb on - strand, within MPMX26_02877
Per-strain Table
Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds remove 2,971,813 - MPMX26_02874 0.46 +0.0 2,971,838 - MPMX26_02874 0.49 -1.0 2,971,846 - MPMX26_02874 0.50 -0.4 2,971,887 + MPMX26_02874 0.54 -0.4 2,971,887 - MPMX26_02874 0.54 +0.5 2,971,939 - MPMX26_02874 0.59 +1.4 2,971,987 - MPMX26_02874 0.63 +0.0 2,972,137 - MPMX26_02874 0.78 -0.2 2,972,307 - +1.0 2,972,555 - MPMX26_02875 0.48 -0.2 2,972,583 - MPMX26_02875 0.56 -0.7 2,972,698 - MPMX26_02875 0.89 -0.4 2,972,715 - -0.5 2,972,792 - +0.2 2,972,842 - +0.6 2,972,859 - MPMX26_02876 0.10 -0.5 2,972,947 - MPMX26_02876 0.20 -0.9 2,973,157 - MPMX26_02876 0.45 -0.6 2,973,282 + MPMX26_02876 0.59 -1.5 2,973,502 - MPMX26_02876 0.84 -0.5 2,973,564 - +0.2 2,974,083 - -0.8 2,974,089 - +0.0 2,974,089 - -0.3 2,974,089 - -0.4 2,974,122 - -0.5 2,974,122 - +0.1 2,974,122 - -0.4 2,974,122 - -0.3 2,974,201 - -0.3 2,974,201 - +0.0 2,974,209 - -0.2 2,974,280 + +0.2 2,974,307 - +1.4 2,974,332 + MPMX26_02877 0.10 +0.2 2,974,337 + MPMX26_02877 0.11 -0.1 2,974,337 + MPMX26_02877 0.11 +0.1 2,974,337 + MPMX26_02877 0.11 +0.0 2,974,345 - MPMX26_02877 0.11 +0.4 2,974,345 - MPMX26_02877 0.11 +0.5 2,974,345 - MPMX26_02877 0.11 +0.0 2,974,345 - MPMX26_02877 0.11 +0.1 2,974,345 - MPMX26_02877 0.11 -0.7 2,974,345 - MPMX26_02877 0.11 -0.1 2,974,345 - MPMX26_02877 0.11 +0.4 2,974,345 - MPMX26_02877 0.11 +0.2 2,974,489 - MPMX26_02877 0.17 -0.2 2,974,489 - MPMX26_02877 0.17 +0.5 2,974,489 - MPMX26_02877 0.17 +0.2 2,974,489 - MPMX26_02877 0.17 +0.3 2,974,489 - MPMX26_02877 0.17 -0.0 2,974,489 - MPMX26_02877 0.17 +0.2 2,974,492 - MPMX26_02877 0.17 +0.6 2,974,492 - MPMX26_02877 0.17 +0.1 2,974,492 - MPMX26_02877 0.17 +0.3 2,974,492 - MPMX26_02877 0.17 -0.7 2,974,492 - MPMX26_02877 0.17 +0.1 2,974,549 - MPMX26_02877 0.19 +0.3 2,974,588 - MPMX26_02877 0.21 -0.2 2,974,589 - MPMX26_02877 0.21 +0.7 2,974,589 - MPMX26_02877 0.21 -0.1 2,974,589 - MPMX26_02877 0.21 -1.2 2,974,589 - MPMX26_02877 0.21 +0.8 2,974,598 - MPMX26_02877 0.21 +0.4 2,974,638 - MPMX26_02877 0.23 -0.1
Or see this region's nucleotide sequence