Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02853

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02851 and MPMX26_02852 are separated by 31 nucleotidesMPMX26_02852 and MPMX26_02853 are separated by 5 nucleotidesMPMX26_02853 and MPMX26_02854 are separated by 112 nucleotides MPMX26_02851: MPMX26_02851 - hypothetical protein, at 2,942,197 to 2,942,592 _02851 MPMX26_02852: MPMX26_02852 - hypothetical protein, at 2,942,624 to 2,943,244 _02852 MPMX26_02853: MPMX26_02853 - Homoserine kinase, at 2,943,250 to 2,944,200 _02853 MPMX26_02854: MPMX26_02854 - Imidazole glycerol phosphate synthase subunit HisF, at 2,944,313 to 2,945,071 _02854 Position (kb) 2943 2944 2945Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2942.256 kb on - strand, within MPMX26_02851at 2942.259 kb on - strand, within MPMX26_02851at 2942.259 kb on - strand, within MPMX26_02851at 2942.261 kb on - strand, within MPMX26_02851at 2942.266 kb on - strand, within MPMX26_02851at 2942.283 kb on - strand, within MPMX26_02851at 2942.286 kb on - strand, within MPMX26_02851at 2942.402 kb on - strand, within MPMX26_02851at 2942.416 kb on - strand, within MPMX26_02851at 2942.444 kb on - strand, within MPMX26_02851at 2942.460 kb on - strand, within MPMX26_02851at 2942.497 kb on - strand, within MPMX26_02851at 2942.577 kb on - strandat 2942.577 kb on - strandat 2942.577 kb on - strandat 2942.587 kb on - strandat 2942.760 kb on - strand, within MPMX26_02852at 2942.807 kb on - strand, within MPMX26_02852at 2942.819 kb on - strand, within MPMX26_02852at 2942.837 kb on - strand, within MPMX26_02852at 2942.837 kb on - strand, within MPMX26_02852at 2942.837 kb on - strand, within MPMX26_02852at 2942.837 kb on - strand, within MPMX26_02852at 2942.849 kb on - strand, within MPMX26_02852at 2942.930 kb on - strand, within MPMX26_02852at 2942.930 kb on - strand, within MPMX26_02852at 2942.930 kb on - strand, within MPMX26_02852at 2943.002 kb on - strand, within MPMX26_02852at 2943.028 kb on - strand, within MPMX26_02852at 2943.033 kb on - strand, within MPMX26_02852at 2943.038 kb on - strand, within MPMX26_02852at 2943.038 kb on - strand, within MPMX26_02852at 2943.044 kb on - strand, within MPMX26_02852at 2943.128 kb on - strand, within MPMX26_02852at 2943.128 kb on - strand, within MPMX26_02852at 2943.169 kb on - strand, within MPMX26_02852at 2943.198 kb on - strandat 2943.199 kb on - strandat 2943.272 kb on - strandat 2943.282 kb on - strandat 2943.352 kb on - strand, within MPMX26_02853at 2943.357 kb on - strand, within MPMX26_02853at 2943.357 kb on - strand, within MPMX26_02853at 2943.439 kb on - strand, within MPMX26_02853at 2943.447 kb on - strand, within MPMX26_02853at 2943.457 kb on - strand, within MPMX26_02853at 2943.477 kb on - strand, within MPMX26_02853at 2943.477 kb on - strand, within MPMX26_02853at 2943.477 kb on - strand, within MPMX26_02853at 2943.477 kb on - strand, within MPMX26_02853at 2943.477 kb on - strand, within MPMX26_02853at 2943.547 kb on - strand, within MPMX26_02853at 2943.604 kb on - strand, within MPMX26_02853at 2943.621 kb on - strand, within MPMX26_02853at 2943.622 kb on - strand, within MPMX26_02853at 2943.706 kb on - strand, within MPMX26_02853at 2943.720 kb on - strand, within MPMX26_02853at 2943.782 kb on - strand, within MPMX26_02853at 2943.844 kb on - strand, within MPMX26_02853at 2943.844 kb on - strand, within MPMX26_02853at 2943.847 kb on - strand, within MPMX26_02853at 2943.871 kb on - strand, within MPMX26_02853at 2943.871 kb on - strand, within MPMX26_02853at 2943.871 kb on - strand, within MPMX26_02853at 2943.871 kb on - strand, within MPMX26_02853at 2943.871 kb on - strand, within MPMX26_02853at 2943.871 kb on - strand, within MPMX26_02853at 2943.871 kb on - strand, within MPMX26_02853at 2943.871 kb on - strand, within MPMX26_02853at 2943.871 kb on - strand, within MPMX26_02853at 2943.871 kb on - strand, within MPMX26_02853at 2943.871 kb on - strand, within MPMX26_02853at 2943.876 kb on - strand, within MPMX26_02853at 2943.881 kb on - strand, within MPMX26_02853at 2943.881 kb on - strand, within MPMX26_02853at 2943.895 kb on - strand, within MPMX26_02853at 2943.895 kb on - strand, within MPMX26_02853at 2943.912 kb on - strand, within MPMX26_02853at 2943.959 kb on - strand, within MPMX26_02853at 2943.993 kb on - strand, within MPMX26_02853at 2944.002 kb on - strand, within MPMX26_02853at 2944.017 kb on - strand, within MPMX26_02853at 2944.028 kb on - strand, within MPMX26_02853at 2944.031 kb on - strand, within MPMX26_02853at 2944.036 kb on - strand, within MPMX26_02853at 2944.036 kb on - strand, within MPMX26_02853at 2944.036 kb on - strand, within MPMX26_02853at 2944.104 kb on - strand, within MPMX26_02853at 2944.167 kb on - strandat 2944.326 kb on + strandat 2944.380 kb on + strandat 2944.400 kb on + strand, within MPMX26_02854at 2944.400 kb on + strand, within MPMX26_02854at 2944.408 kb on + strand, within MPMX26_02854at 2944.413 kb on + strand, within MPMX26_02854at 2944.448 kb on + strand, within MPMX26_02854at 2944.489 kb on + strand, within MPMX26_02854at 2944.489 kb on + strand, within MPMX26_02854at 2944.489 kb on + strand, within MPMX26_02854at 2944.489 kb on + strand, within MPMX26_02854at 2944.508 kb on + strand, within MPMX26_02854at 2944.508 kb on + strand, within MPMX26_02854at 2944.508 kb on + strand, within MPMX26_02854at 2944.515 kb on + strand, within MPMX26_02854at 2944.516 kb on - strand, within MPMX26_02854at 2944.539 kb on + strand, within MPMX26_02854at 2944.567 kb on + strand, within MPMX26_02854at 2944.658 kb on + strand, within MPMX26_02854at 2944.658 kb on + strand, within MPMX26_02854at 2944.683 kb on + strand, within MPMX26_02854at 2944.683 kb on + strand, within MPMX26_02854at 2944.755 kb on + strand, within MPMX26_02854at 2944.764 kb on + strand, within MPMX26_02854at 2944.801 kb on + strand, within MPMX26_02854at 2944.856 kb on + strand, within MPMX26_02854at 2944.863 kb on + strand, within MPMX26_02854at 2944.868 kb on + strand, within MPMX26_02854at 2944.868 kb on + strand, within MPMX26_02854at 2944.932 kb on + strand, within MPMX26_02854at 2944.974 kb on + strand, within MPMX26_02854at 2944.979 kb on + strand, within MPMX26_02854at 2945.030 kb on + strandat 2945.045 kb on + strandat 2945.052 kb on + strandat 2945.052 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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2,942,256 - MPMX26_02851 0.15 +0.2
2,942,259 - MPMX26_02851 0.16 -0.3
2,942,259 - MPMX26_02851 0.16 +0.2
2,942,261 - MPMX26_02851 0.16 -0.2
2,942,266 - MPMX26_02851 0.17 -0.5
2,942,283 - MPMX26_02851 0.22 +0.3
2,942,286 - MPMX26_02851 0.22 -0.3
2,942,402 - MPMX26_02851 0.52 +0.5
2,942,416 - MPMX26_02851 0.55 +0.2
2,942,444 - MPMX26_02851 0.62 -0.3
2,942,460 - MPMX26_02851 0.66 +0.5
2,942,497 - MPMX26_02851 0.76 +0.1
2,942,577 - -0.2
2,942,577 - -0.4
2,942,577 - +0.5
2,942,587 - +0.8
2,942,760 - MPMX26_02852 0.22 -0.4
2,942,807 - MPMX26_02852 0.29 +0.0
2,942,819 - MPMX26_02852 0.31 -0.6
2,942,837 - MPMX26_02852 0.34 +0.9
2,942,837 - MPMX26_02852 0.34 -0.0
2,942,837 - MPMX26_02852 0.34 -0.9
2,942,837 - MPMX26_02852 0.34 +0.2
2,942,849 - MPMX26_02852 0.36 +0.4
2,942,930 - MPMX26_02852 0.49 +0.5
2,942,930 - MPMX26_02852 0.49 -0.4
2,942,930 - MPMX26_02852 0.49 -1.1
2,943,002 - MPMX26_02852 0.61 -0.9
2,943,028 - MPMX26_02852 0.65 -0.5
2,943,033 - MPMX26_02852 0.66 -0.3
2,943,038 - MPMX26_02852 0.67 +0.6
2,943,038 - MPMX26_02852 0.67 +0.2
2,943,044 - MPMX26_02852 0.68 -0.5
2,943,128 - MPMX26_02852 0.81 -1.0
2,943,128 - MPMX26_02852 0.81 +0.5
2,943,169 - MPMX26_02852 0.88 -1.0
2,943,198 - +0.2
2,943,199 - +1.2
2,943,272 - +0.0
2,943,282 - +0.0
2,943,352 - MPMX26_02853 0.11 -1.2
2,943,357 - MPMX26_02853 0.11 -1.2
2,943,357 - MPMX26_02853 0.11 -0.5
2,943,439 - MPMX26_02853 0.20 -1.7
2,943,447 - MPMX26_02853 0.21 +0.0
2,943,457 - MPMX26_02853 0.22 -2.5
2,943,477 - MPMX26_02853 0.24 -2.2
2,943,477 - MPMX26_02853 0.24 -1.5
2,943,477 - MPMX26_02853 0.24 -1.0
2,943,477 - MPMX26_02853 0.24 -0.4
2,943,477 - MPMX26_02853 0.24 -1.4
2,943,547 - MPMX26_02853 0.31 -1.0
2,943,604 - MPMX26_02853 0.37 -1.0
2,943,621 - MPMX26_02853 0.39 -0.2
2,943,622 - MPMX26_02853 0.39 +0.0
2,943,706 - MPMX26_02853 0.48 -2.0
2,943,720 - MPMX26_02853 0.49 -3.0
2,943,782 - MPMX26_02853 0.56 +1.0
2,943,844 - MPMX26_02853 0.62 -0.5
2,943,844 - MPMX26_02853 0.62 +0.1
2,943,847 - MPMX26_02853 0.63 -1.7
2,943,871 - MPMX26_02853 0.65 +0.6
2,943,871 - MPMX26_02853 0.65 -0.4
2,943,871 - MPMX26_02853 0.65 -0.2
2,943,871 - MPMX26_02853 0.65 -1.2
2,943,871 - MPMX26_02853 0.65 -2.7
2,943,871 - MPMX26_02853 0.65 +0.6
2,943,871 - MPMX26_02853 0.65 -1.2
2,943,871 - MPMX26_02853 0.65 -0.2
2,943,871 - MPMX26_02853 0.65 -0.6
2,943,871 - MPMX26_02853 0.65 +0.6
2,943,871 - MPMX26_02853 0.65 -0.2
2,943,876 - MPMX26_02853 0.66 -0.7
2,943,881 - MPMX26_02853 0.66 +0.6
2,943,881 - MPMX26_02853 0.66 -0.4
2,943,895 - MPMX26_02853 0.68 -0.5
2,943,895 - MPMX26_02853 0.68 -1.0
2,943,912 - MPMX26_02853 0.70 -0.1
2,943,959 - MPMX26_02853 0.75 -0.4
2,943,993 - MPMX26_02853 0.78 -1.0
2,944,002 - MPMX26_02853 0.79 -1.5
2,944,017 - MPMX26_02853 0.81 +1.2
2,944,028 - MPMX26_02853 0.82 +0.6
2,944,031 - MPMX26_02853 0.82 -1.8
2,944,036 - MPMX26_02853 0.83 +2.0
2,944,036 - MPMX26_02853 0.83 +0.6
2,944,036 - MPMX26_02853 0.83 -1.8
2,944,104 - MPMX26_02853 0.90 -2.5
2,944,167 - +0.3
2,944,326 + -1.0
2,944,380 + -0.4
2,944,400 + MPMX26_02854 0.11 +0.0
2,944,400 + MPMX26_02854 0.11 +1.0
2,944,408 + MPMX26_02854 0.13 -0.4
2,944,413 + MPMX26_02854 0.13 +0.5
2,944,448 + MPMX26_02854 0.18 +0.2
2,944,489 + MPMX26_02854 0.23 -1.4
2,944,489 + MPMX26_02854 0.23 +0.2
2,944,489 + MPMX26_02854 0.23 -1.7
2,944,489 + MPMX26_02854 0.23 -0.8
2,944,508 + MPMX26_02854 0.26 -0.8
2,944,508 + MPMX26_02854 0.26 -0.2
2,944,508 + MPMX26_02854 0.26 -0.8
2,944,515 + MPMX26_02854 0.27 -0.4
2,944,516 - MPMX26_02854 0.27 -1.0
2,944,539 + MPMX26_02854 0.30 -0.6
2,944,567 + MPMX26_02854 0.33 -0.3
2,944,658 + MPMX26_02854 0.45 -0.5
2,944,658 + MPMX26_02854 0.45 -1.3
2,944,683 + MPMX26_02854 0.49 -1.0
2,944,683 + MPMX26_02854 0.49 -1.1
2,944,755 + MPMX26_02854 0.58 -0.9
2,944,764 + MPMX26_02854 0.59 -1.9
2,944,801 + MPMX26_02854 0.64 -0.2
2,944,856 + MPMX26_02854 0.72 +0.1
2,944,863 + MPMX26_02854 0.72 -0.4
2,944,868 + MPMX26_02854 0.73 -1.9
2,944,868 + MPMX26_02854 0.73 -0.3
2,944,932 + MPMX26_02854 0.82 -1.0
2,944,974 + MPMX26_02854 0.87 -1.4
2,944,979 + MPMX26_02854 0.88 -0.2
2,945,030 + -1.1
2,945,045 + -0.8
2,945,052 + -0.5
2,945,052 + -0.2

Or see this region's nucleotide sequence