Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02839

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02838 and MPMX26_02839 are separated by 210 nucleotidesMPMX26_02839 and MPMX26_02840 are separated by 202 nucleotides MPMX26_02838: MPMX26_02838 - Transcriptional regulatory protein OmpR, at 2,931,341 to 2,932,105 _02838 MPMX26_02839: MPMX26_02839 - Osmolarity sensor protein EnvZ, at 2,932,316 to 2,933,773 _02839 MPMX26_02840: MPMX26_02840 - Succinyl-CoA:coenzyme A transferase, at 2,933,976 to 2,935,490 _02840 Position (kb) 2932 2933 2934Strain fitness (log2 ratio) -3 -2 -1 0 1at 2931.324 kb on + strandat 2931.324 kb on + strandat 2931.324 kb on + strandat 2931.367 kb on + strandat 2931.377 kb on + strandat 2931.382 kb on + strandat 2931.401 kb on + strandat 2931.420 kb on + strand, within MPMX26_02838at 2931.464 kb on + strand, within MPMX26_02838at 2931.594 kb on + strand, within MPMX26_02838at 2931.604 kb on + strand, within MPMX26_02838at 2931.681 kb on + strand, within MPMX26_02838at 2931.738 kb on + strand, within MPMX26_02838at 2931.743 kb on + strand, within MPMX26_02838at 2931.743 kb on + strand, within MPMX26_02838at 2931.743 kb on + strand, within MPMX26_02838at 2931.743 kb on + strand, within MPMX26_02838at 2931.743 kb on + strand, within MPMX26_02838at 2931.777 kb on + strand, within MPMX26_02838at 2931.790 kb on + strand, within MPMX26_02838at 2931.796 kb on + strand, within MPMX26_02838at 2931.930 kb on + strand, within MPMX26_02838at 2931.960 kb on + strand, within MPMX26_02838at 2932.095 kb on + strandat 2932.095 kb on + strandat 2932.152 kb on + strandat 2932.202 kb on + strandat 2932.237 kb on + strandat 2932.238 kb on + strandat 2932.354 kb on + strandat 2932.360 kb on + strandat 2932.407 kb on + strandat 2932.407 kb on + strandat 2932.422 kb on + strandat 2932.422 kb on + strandat 2932.432 kb on + strandat 2932.437 kb on + strandat 2932.437 kb on + strandat 2932.437 kb on + strandat 2932.437 kb on + strandat 2932.437 kb on + strandat 2932.437 kb on + strandat 2932.437 kb on + strandat 2932.452 kb on + strandat 2932.460 kb on + strandat 2932.462 kb on + strand, within MPMX26_02839at 2932.465 kb on + strand, within MPMX26_02839at 2932.474 kb on + strand, within MPMX26_02839at 2932.474 kb on + strand, within MPMX26_02839at 2932.474 kb on + strand, within MPMX26_02839at 2932.474 kb on + strand, within MPMX26_02839at 2932.474 kb on + strand, within MPMX26_02839at 2932.533 kb on + strand, within MPMX26_02839at 2932.638 kb on + strand, within MPMX26_02839at 2932.656 kb on + strand, within MPMX26_02839at 2932.687 kb on + strand, within MPMX26_02839at 2932.754 kb on + strand, within MPMX26_02839at 2932.771 kb on + strand, within MPMX26_02839at 2932.771 kb on + strand, within MPMX26_02839at 2932.796 kb on + strand, within MPMX26_02839at 2932.855 kb on + strand, within MPMX26_02839at 2932.855 kb on + strand, within MPMX26_02839at 2932.855 kb on + strand, within MPMX26_02839at 2932.892 kb on + strand, within MPMX26_02839at 2932.973 kb on + strand, within MPMX26_02839at 2933.075 kb on + strand, within MPMX26_02839at 2933.239 kb on + strand, within MPMX26_02839at 2933.239 kb on + strand, within MPMX26_02839at 2933.247 kb on + strand, within MPMX26_02839at 2933.323 kb on + strand, within MPMX26_02839at 2933.323 kb on + strand, within MPMX26_02839at 2933.330 kb on + strand, within MPMX26_02839at 2933.351 kb on + strand, within MPMX26_02839at 2933.360 kb on + strand, within MPMX26_02839at 2933.370 kb on + strand, within MPMX26_02839at 2933.431 kb on + strand, within MPMX26_02839at 2933.468 kb on + strand, within MPMX26_02839at 2933.566 kb on + strand, within MPMX26_02839at 2933.566 kb on + strand, within MPMX26_02839at 2933.576 kb on + strand, within MPMX26_02839at 2933.576 kb on + strand, within MPMX26_02839at 2933.576 kb on + strand, within MPMX26_02839at 2933.576 kb on + strand, within MPMX26_02839at 2933.576 kb on + strand, within MPMX26_02839at 2933.576 kb on + strand, within MPMX26_02839at 2933.576 kb on + strand, within MPMX26_02839at 2933.576 kb on + strand, within MPMX26_02839at 2933.588 kb on + strand, within MPMX26_02839at 2933.588 kb on + strand, within MPMX26_02839at 2933.588 kb on + strand, within MPMX26_02839at 2933.588 kb on + strand, within MPMX26_02839at 2933.588 kb on + strand, within MPMX26_02839at 2933.655 kb on + strandat 2933.702 kb on - strandat 2933.937 kb on + strandat 2933.937 kb on + strandat 2933.937 kb on + strandat 2934.006 kb on + strandat 2934.006 kb on + strandat 2934.020 kb on + strandat 2934.025 kb on + strandat 2934.025 kb on + strandat 2934.036 kb on + strandat 2934.056 kb on + strandat 2934.070 kb on + strandat 2934.078 kb on + strandat 2934.078 kb on + strandat 2934.079 kb on + strandat 2934.093 kb on + strandat 2934.093 kb on + strandat 2934.093 kb on + strandat 2934.093 kb on + strandat 2934.093 kb on + strandat 2934.093 kb on + strandat 2934.093 kb on + strandat 2934.111 kb on + strandat 2934.130 kb on + strand, within MPMX26_02840at 2934.130 kb on + strand, within MPMX26_02840at 2934.169 kb on + strand, within MPMX26_02840at 2934.169 kb on + strand, within MPMX26_02840at 2934.174 kb on + strand, within MPMX26_02840at 2934.186 kb on + strand, within MPMX26_02840at 2934.186 kb on + strand, within MPMX26_02840at 2934.204 kb on + strand, within MPMX26_02840at 2934.208 kb on + strand, within MPMX26_02840at 2934.245 kb on + strand, within MPMX26_02840at 2934.245 kb on + strand, within MPMX26_02840at 2934.245 kb on + strand, within MPMX26_02840at 2934.245 kb on + strand, within MPMX26_02840at 2934.245 kb on + strand, within MPMX26_02840at 2934.246 kb on + strand, within MPMX26_02840at 2934.246 kb on + strand, within MPMX26_02840at 2934.246 kb on + strand, within MPMX26_02840at 2934.252 kb on + strand, within MPMX26_02840at 2934.276 kb on + strand, within MPMX26_02840at 2934.280 kb on + strand, within MPMX26_02840at 2934.313 kb on + strand, within MPMX26_02840at 2934.313 kb on + strand, within MPMX26_02840at 2934.313 kb on + strand, within MPMX26_02840at 2934.313 kb on + strand, within MPMX26_02840at 2934.313 kb on + strand, within MPMX26_02840at 2934.313 kb on + strand, within MPMX26_02840at 2934.372 kb on + strand, within MPMX26_02840at 2934.414 kb on + strand, within MPMX26_02840at 2934.416 kb on + strand, within MPMX26_02840at 2934.416 kb on + strand, within MPMX26_02840at 2934.488 kb on + strand, within MPMX26_02840at 2934.495 kb on + strand, within MPMX26_02840at 2934.532 kb on + strand, within MPMX26_02840at 2934.538 kb on + strand, within MPMX26_02840at 2934.538 kb on + strand, within MPMX26_02840at 2934.538 kb on + strand, within MPMX26_02840at 2934.538 kb on + strand, within MPMX26_02840at 2934.546 kb on - strand, within MPMX26_02840at 2934.547 kb on + strand, within MPMX26_02840at 2934.590 kb on + strand, within MPMX26_02840at 2934.590 kb on + strand, within MPMX26_02840at 2934.613 kb on + strand, within MPMX26_02840at 2934.613 kb on + strand, within MPMX26_02840

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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2,931,324 + -1.0
2,931,324 + +1.6
2,931,324 + +0.3
2,931,367 + +0.6
2,931,377 + +0.6
2,931,382 + -1.7
2,931,401 + -0.4
2,931,420 + MPMX26_02838 0.10 +0.0
2,931,464 + MPMX26_02838 0.16 -0.7
2,931,594 + MPMX26_02838 0.33 +0.6
2,931,604 + MPMX26_02838 0.34 +0.0
2,931,681 + MPMX26_02838 0.44 -1.2
2,931,738 + MPMX26_02838 0.52 +0.0
2,931,743 + MPMX26_02838 0.53 -1.0
2,931,743 + MPMX26_02838 0.53 +0.0
2,931,743 + MPMX26_02838 0.53 -1.0
2,931,743 + MPMX26_02838 0.53 -1.2
2,931,743 + MPMX26_02838 0.53 +0.6
2,931,777 + MPMX26_02838 0.57 -0.4
2,931,790 + MPMX26_02838 0.59 -1.4
2,931,796 + MPMX26_02838 0.59 +0.0
2,931,930 + MPMX26_02838 0.77 +0.6
2,931,960 + MPMX26_02838 0.81 -0.4
2,932,095 + -0.2
2,932,095 + +0.0
2,932,152 + +0.1
2,932,202 + -0.3
2,932,237 + +0.6
2,932,238 + -0.4
2,932,354 + +0.1
2,932,360 + -0.5
2,932,407 + -0.7
2,932,407 + -1.4
2,932,422 + +0.0
2,932,422 + -0.1
2,932,432 + -0.8
2,932,437 + -1.1
2,932,437 + -2.2
2,932,437 + -1.2
2,932,437 + -0.2
2,932,437 + -2.1
2,932,437 + -2.2
2,932,437 + +0.0
2,932,452 + +0.6
2,932,460 + +0.5
2,932,462 + MPMX26_02839 0.10 -0.4
2,932,465 + MPMX26_02839 0.10 -1.7
2,932,474 + MPMX26_02839 0.11 -1.2
2,932,474 + MPMX26_02839 0.11 -2.1
2,932,474 + MPMX26_02839 0.11 +0.3
2,932,474 + MPMX26_02839 0.11 -1.0
2,932,474 + MPMX26_02839 0.11 -0.5
2,932,533 + MPMX26_02839 0.15 -0.6
2,932,638 + MPMX26_02839 0.22 -1.7
2,932,656 + MPMX26_02839 0.23 -1.7
2,932,687 + MPMX26_02839 0.25 -1.4
2,932,754 + MPMX26_02839 0.30 -2.0
2,932,771 + MPMX26_02839 0.31 -1.0
2,932,771 + MPMX26_02839 0.31 +1.0
2,932,796 + MPMX26_02839 0.33 +0.0
2,932,855 + MPMX26_02839 0.37 +0.0
2,932,855 + MPMX26_02839 0.37 -1.0
2,932,855 + MPMX26_02839 0.37 -1.5
2,932,892 + MPMX26_02839 0.40 -2.9
2,932,973 + MPMX26_02839 0.45 -0.7
2,933,075 + MPMX26_02839 0.52 -0.7
2,933,239 + MPMX26_02839 0.63 -1.2
2,933,239 + MPMX26_02839 0.63 +0.6
2,933,247 + MPMX26_02839 0.64 -0.5
2,933,323 + MPMX26_02839 0.69 +0.3
2,933,323 + MPMX26_02839 0.69 -1.4
2,933,330 + MPMX26_02839 0.70 -1.5
2,933,351 + MPMX26_02839 0.71 -0.7
2,933,360 + MPMX26_02839 0.72 +0.4
2,933,370 + MPMX26_02839 0.72 -1.2
2,933,431 + MPMX26_02839 0.76 -1.5
2,933,468 + MPMX26_02839 0.79 -1.2
2,933,566 + MPMX26_02839 0.86 +0.2
2,933,566 + MPMX26_02839 0.86 -1.8
2,933,576 + MPMX26_02839 0.86 -0.1
2,933,576 + MPMX26_02839 0.86 -0.8
2,933,576 + MPMX26_02839 0.86 -1.8
2,933,576 + MPMX26_02839 0.86 -1.2
2,933,576 + MPMX26_02839 0.86 +0.6
2,933,576 + MPMX26_02839 0.86 -1.4
2,933,576 + MPMX26_02839 0.86 -0.5
2,933,576 + MPMX26_02839 0.86 -1.4
2,933,588 + MPMX26_02839 0.87 -2.0
2,933,588 + MPMX26_02839 0.87 +0.0
2,933,588 + MPMX26_02839 0.87 -2.4
2,933,588 + MPMX26_02839 0.87 -3.1
2,933,588 + MPMX26_02839 0.87 -2.1
2,933,655 + -0.4
2,933,702 - +0.8
2,933,937 + -1.5
2,933,937 + +0.4
2,933,937 + +0.3
2,934,006 + -0.6
2,934,006 + -0.6
2,934,020 + -0.7
2,934,025 + +0.4
2,934,025 + -1.4
2,934,036 + -0.4
2,934,056 + -1.0
2,934,070 + +0.1
2,934,078 + -0.8
2,934,078 + -1.3
2,934,079 + -0.9
2,934,093 + -1.1
2,934,093 + -1.0
2,934,093 + -0.8
2,934,093 + -1.1
2,934,093 + -0.6
2,934,093 + -0.0
2,934,093 + -0.9
2,934,111 + -0.6
2,934,130 + MPMX26_02840 0.10 -1.3
2,934,130 + MPMX26_02840 0.10 -0.5
2,934,169 + MPMX26_02840 0.13 -0.2
2,934,169 + MPMX26_02840 0.13 -0.8
2,934,174 + MPMX26_02840 0.13 -2.4
2,934,186 + MPMX26_02840 0.14 -0.8
2,934,186 + MPMX26_02840 0.14 -1.2
2,934,204 + MPMX26_02840 0.15 -0.6
2,934,208 + MPMX26_02840 0.15 +0.1
2,934,245 + MPMX26_02840 0.18 -0.4
2,934,245 + MPMX26_02840 0.18 -0.3
2,934,245 + MPMX26_02840 0.18 -0.1
2,934,245 + MPMX26_02840 0.18 -0.5
2,934,245 + MPMX26_02840 0.18 -0.5
2,934,246 + MPMX26_02840 0.18 -1.8
2,934,246 + MPMX26_02840 0.18 +1.6
2,934,246 + MPMX26_02840 0.18 -0.4
2,934,252 + MPMX26_02840 0.18 -1.1
2,934,276 + MPMX26_02840 0.20 -0.2
2,934,280 + MPMX26_02840 0.20 -1.0
2,934,313 + MPMX26_02840 0.22 -0.9
2,934,313 + MPMX26_02840 0.22 -0.5
2,934,313 + MPMX26_02840 0.22 -0.8
2,934,313 + MPMX26_02840 0.22 -0.6
2,934,313 + MPMX26_02840 0.22 -0.4
2,934,313 + MPMX26_02840 0.22 -0.3
2,934,372 + MPMX26_02840 0.26 -1.2
2,934,414 + MPMX26_02840 0.29 -0.7
2,934,416 + MPMX26_02840 0.29 -0.9
2,934,416 + MPMX26_02840 0.29 -0.6
2,934,488 + MPMX26_02840 0.34 -0.4
2,934,495 + MPMX26_02840 0.34 -0.8
2,934,532 + MPMX26_02840 0.37 -0.9
2,934,538 + MPMX26_02840 0.37 -0.8
2,934,538 + MPMX26_02840 0.37 +0.6
2,934,538 + MPMX26_02840 0.37 -0.5
2,934,538 + MPMX26_02840 0.37 -1.5
2,934,546 - MPMX26_02840 0.38 -2.2
2,934,547 + MPMX26_02840 0.38 -0.5
2,934,590 + MPMX26_02840 0.41 -0.4
2,934,590 + MPMX26_02840 0.41 -0.3
2,934,613 + MPMX26_02840 0.42 -0.9
2,934,613 + MPMX26_02840 0.42 -0.3

Or see this region's nucleotide sequence