Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02665

Experiment: UV exposure at 150J/m2 for 20 seconds

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_02664 and MPMX26_02665 are separated by 201 nucleotidesMPMX26_02665 and MPMX26_02666 are separated by 47 nucleotides MPMX26_02664: MPMX26_02664 - Malate dehydrogenase, at 2,759,551 to 2,760,537 _02664 MPMX26_02665: MPMX26_02665 - hypothetical protein, at 2,760,739 to 2,761,395 _02665 MPMX26_02666: MPMX26_02666 - Soluble lytic murein transglycosylase, at 2,761,443 to 2,763,428 _02666 Position (kb) 2760 2761 2762Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2760.589 kb on - strandat 2760.634 kb on + strandat 2760.706 kb on - strandat 2760.758 kb on - strandat 2760.766 kb on + strandat 2760.799 kb on + strandat 2760.799 kb on + strandat 2760.799 kb on + strandat 2760.799 kb on + strandat 2760.799 kb on - strandat 2760.808 kb on - strand, within MPMX26_02665at 2760.808 kb on - strand, within MPMX26_02665at 2760.808 kb on - strand, within MPMX26_02665at 2760.808 kb on - strand, within MPMX26_02665at 2760.829 kb on + strand, within MPMX26_02665at 2760.837 kb on - strand, within MPMX26_02665at 2760.838 kb on - strand, within MPMX26_02665at 2760.850 kb on - strand, within MPMX26_02665at 2760.880 kb on - strand, within MPMX26_02665at 2760.972 kb on + strand, within MPMX26_02665at 2760.975 kb on - strand, within MPMX26_02665at 2760.988 kb on - strand, within MPMX26_02665at 2760.998 kb on + strand, within MPMX26_02665at 2761.034 kb on - strand, within MPMX26_02665at 2761.058 kb on - strand, within MPMX26_02665at 2761.058 kb on - strand, within MPMX26_02665at 2761.058 kb on - strand, within MPMX26_02665at 2761.074 kb on - strand, within MPMX26_02665at 2761.117 kb on - strand, within MPMX26_02665at 2761.164 kb on - strand, within MPMX26_02665at 2761.177 kb on - strand, within MPMX26_02665at 2761.197 kb on + strand, within MPMX26_02665at 2761.212 kb on - strand, within MPMX26_02665at 2761.214 kb on - strand, within MPMX26_02665at 2761.214 kb on - strand, within MPMX26_02665at 2761.214 kb on - strand, within MPMX26_02665at 2761.216 kb on - strand, within MPMX26_02665at 2761.218 kb on + strand, within MPMX26_02665at 2761.230 kb on + strand, within MPMX26_02665at 2761.238 kb on - strand, within MPMX26_02665at 2761.238 kb on - strand, within MPMX26_02665at 2761.242 kb on - strand, within MPMX26_02665at 2761.243 kb on - strand, within MPMX26_02665at 2761.248 kb on - strand, within MPMX26_02665at 2761.248 kb on - strand, within MPMX26_02665at 2761.248 kb on - strand, within MPMX26_02665at 2761.248 kb on - strand, within MPMX26_02665at 2761.250 kb on - strand, within MPMX26_02665at 2761.254 kb on - strand, within MPMX26_02665at 2761.272 kb on - strand, within MPMX26_02665at 2761.272 kb on - strand, within MPMX26_02665at 2761.278 kb on + strand, within MPMX26_02665at 2761.286 kb on - strand, within MPMX26_02665at 2761.286 kb on - strand, within MPMX26_02665at 2761.296 kb on - strand, within MPMX26_02665at 2761.296 kb on - strand, within MPMX26_02665at 2761.324 kb on - strand, within MPMX26_02665at 2761.324 kb on - strand, within MPMX26_02665at 2761.324 kb on - strand, within MPMX26_02665at 2761.329 kb on - strand, within MPMX26_02665at 2761.344 kb on - strandat 2761.346 kb on - strandat 2761.363 kb on - strandat 2761.433 kb on - strandat 2761.440 kb on + strandat 2761.448 kb on + strandat 2761.448 kb on + strandat 2761.448 kb on + strandat 2761.448 kb on + strandat 2761.448 kb on - strandat 2761.448 kb on - strandat 2761.456 kb on - strandat 2761.456 kb on - strandat 2761.456 kb on - strandat 2761.471 kb on - strandat 2761.471 kb on - strandat 2761.487 kb on - strandat 2761.487 kb on - strandat 2761.487 kb on - strandat 2761.492 kb on - strandat 2761.496 kb on - strandat 2761.499 kb on - strandat 2761.514 kb on - strandat 2761.531 kb on - strandat 2761.630 kb on - strandat 2761.636 kb on - strandat 2761.636 kb on - strandat 2761.636 kb on - strandat 2761.636 kb on - strandat 2761.636 kb on - strandat 2761.636 kb on - strandat 2761.636 kb on - strandat 2761.636 kb on - strandat 2761.636 kb on - strandat 2761.641 kb on - strandat 2761.641 kb on - strandat 2761.641 kb on - strandat 2761.646 kb on - strand, within MPMX26_02666at 2761.646 kb on - strand, within MPMX26_02666at 2761.673 kb on - strand, within MPMX26_02666at 2761.684 kb on - strand, within MPMX26_02666at 2761.707 kb on - strand, within MPMX26_02666at 2761.717 kb on - strand, within MPMX26_02666at 2761.754 kb on - strand, within MPMX26_02666at 2761.754 kb on - strand, within MPMX26_02666at 2761.754 kb on - strand, within MPMX26_02666at 2761.759 kb on - strand, within MPMX26_02666at 2761.768 kb on - strand, within MPMX26_02666at 2761.768 kb on - strand, within MPMX26_02666at 2761.768 kb on - strand, within MPMX26_02666at 2761.768 kb on - strand, within MPMX26_02666at 2761.793 kb on + strand, within MPMX26_02666at 2761.801 kb on - strand, within MPMX26_02666at 2761.801 kb on - strand, within MPMX26_02666at 2761.801 kb on - strand, within MPMX26_02666at 2761.801 kb on - strand, within MPMX26_02666at 2761.806 kb on - strand, within MPMX26_02666at 2761.809 kb on - strand, within MPMX26_02666at 2761.839 kb on - strand, within MPMX26_02666at 2761.847 kb on - strand, within MPMX26_02666at 2761.899 kb on - strand, within MPMX26_02666at 2761.927 kb on - strand, within MPMX26_02666at 2761.934 kb on - strand, within MPMX26_02666at 2761.936 kb on + strand, within MPMX26_02666at 2761.939 kb on - strand, within MPMX26_02666at 2761.939 kb on - strand, within MPMX26_02666at 2761.939 kb on - strand, within MPMX26_02666at 2761.939 kb on - strand, within MPMX26_02666at 2761.939 kb on - strand, within MPMX26_02666at 2761.939 kb on - strand, within MPMX26_02666at 2761.939 kb on - strand, within MPMX26_02666at 2761.941 kb on - strand, within MPMX26_02666at 2761.941 kb on - strand, within MPMX26_02666at 2761.941 kb on - strand, within MPMX26_02666at 2761.941 kb on - strand, within MPMX26_02666at 2761.941 kb on - strand, within MPMX26_02666at 2761.941 kb on - strand, within MPMX26_02666at 2761.941 kb on - strand, within MPMX26_02666at 2761.941 kb on - strand, within MPMX26_02666at 2761.941 kb on - strand, within MPMX26_02666at 2761.941 kb on - strand, within MPMX26_02666at 2761.941 kb on - strand, within MPMX26_02666at 2761.941 kb on - strand, within MPMX26_02666at 2761.944 kb on - strand, within MPMX26_02666at 2761.946 kb on - strand, within MPMX26_02666at 2761.946 kb on - strand, within MPMX26_02666at 2761.951 kb on - strand, within MPMX26_02666at 2761.951 kb on - strand, within MPMX26_02666at 2761.957 kb on - strand, within MPMX26_02666at 2761.957 kb on - strand, within MPMX26_02666at 2761.974 kb on - strand, within MPMX26_02666at 2761.974 kb on - strand, within MPMX26_02666at 2761.974 kb on - strand, within MPMX26_02666at 2761.987 kb on - strand, within MPMX26_02666at 2761.987 kb on - strand, within MPMX26_02666at 2761.992 kb on - strand, within MPMX26_02666at 2762.020 kb on - strand, within MPMX26_02666at 2762.021 kb on - strand, within MPMX26_02666at 2762.030 kb on - strand, within MPMX26_02666at 2762.046 kb on - strand, within MPMX26_02666at 2762.070 kb on - strand, within MPMX26_02666at 2762.085 kb on - strand, within MPMX26_02666at 2762.086 kb on - strand, within MPMX26_02666at 2762.095 kb on + strand, within MPMX26_02666at 2762.098 kb on - strand, within MPMX26_02666at 2762.098 kb on - strand, within MPMX26_02666at 2762.098 kb on - strand, within MPMX26_02666at 2762.103 kb on - strand, within MPMX26_02666at 2762.103 kb on - strand, within MPMX26_02666at 2762.103 kb on - strand, within MPMX26_02666at 2762.103 kb on - strand, within MPMX26_02666at 2762.129 kb on - strand, within MPMX26_02666at 2762.140 kb on - strand, within MPMX26_02666at 2762.150 kb on - strand, within MPMX26_02666at 2762.207 kb on - strand, within MPMX26_02666at 2762.207 kb on - strand, within MPMX26_02666at 2762.207 kb on - strand, within MPMX26_02666at 2762.223 kb on - strand, within MPMX26_02666at 2762.229 kb on + strand, within MPMX26_02666at 2762.235 kb on - strand, within MPMX26_02666at 2762.235 kb on - strand, within MPMX26_02666at 2762.237 kb on - strand, within MPMX26_02666at 2762.237 kb on - strand, within MPMX26_02666at 2762.237 kb on - strand, within MPMX26_02666at 2762.237 kb on - strand, within MPMX26_02666at 2762.243 kb on - strand, within MPMX26_02666at 2762.243 kb on - strand, within MPMX26_02666at 2762.252 kb on - strand, within MPMX26_02666at 2762.253 kb on - strand, within MPMX26_02666at 2762.297 kb on - strand, within MPMX26_02666at 2762.306 kb on - strand, within MPMX26_02666at 2762.315 kb on - strand, within MPMX26_02666at 2762.325 kb on - strand, within MPMX26_02666at 2762.329 kb on - strand, within MPMX26_02666at 2762.353 kb on + strand, within MPMX26_02666at 2762.387 kb on - strand, within MPMX26_02666

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
remove
2,760,589 - -1.0
2,760,634 + -0.4
2,760,706 - +0.3
2,760,758 - +0.0
2,760,766 + +0.4
2,760,799 + +0.6
2,760,799 + +1.6
2,760,799 + -1.0
2,760,799 + +0.6
2,760,799 - -0.6
2,760,808 - MPMX26_02665 0.11 -0.4
2,760,808 - MPMX26_02665 0.11 -0.9
2,760,808 - MPMX26_02665 0.11 +0.9
2,760,808 - MPMX26_02665 0.11 -0.1
2,760,829 + MPMX26_02665 0.14 -1.0
2,760,837 - MPMX26_02665 0.15 -1.4
2,760,838 - MPMX26_02665 0.15 -1.2
2,760,850 - MPMX26_02665 0.17 +0.1
2,760,880 - MPMX26_02665 0.21 -1.0
2,760,972 + MPMX26_02665 0.35 -1.6
2,760,975 - MPMX26_02665 0.36 -1.8
2,760,988 - MPMX26_02665 0.38 -1.2
2,760,998 + MPMX26_02665 0.39 -1.7
2,761,034 - MPMX26_02665 0.45 -0.1
2,761,058 - MPMX26_02665 0.49 +0.2
2,761,058 - MPMX26_02665 0.49 +0.9
2,761,058 - MPMX26_02665 0.49 +1.0
2,761,074 - MPMX26_02665 0.51 +0.7
2,761,117 - MPMX26_02665 0.58 -0.4
2,761,164 - MPMX26_02665 0.65 -0.7
2,761,177 - MPMX26_02665 0.67 +1.0
2,761,197 + MPMX26_02665 0.70 -0.4
2,761,212 - MPMX26_02665 0.72 -3.1
2,761,214 - MPMX26_02665 0.72 -1.2
2,761,214 - MPMX26_02665 0.72 +0.3
2,761,214 - MPMX26_02665 0.72 -2.0
2,761,216 - MPMX26_02665 0.73 -0.7
2,761,218 + MPMX26_02665 0.73 -0.1
2,761,230 + MPMX26_02665 0.75 -1.0
2,761,238 - MPMX26_02665 0.76 -1.0
2,761,238 - MPMX26_02665 0.76 -0.8
2,761,242 - MPMX26_02665 0.77 -1.3
2,761,243 - MPMX26_02665 0.77 -2.6
2,761,248 - MPMX26_02665 0.77 -0.3
2,761,248 - MPMX26_02665 0.77 -2.2
2,761,248 - MPMX26_02665 0.77 -1.6
2,761,248 - MPMX26_02665 0.77 -0.7
2,761,250 - MPMX26_02665 0.78 -1.2
2,761,254 - MPMX26_02665 0.78 -1.5
2,761,272 - MPMX26_02665 0.81 +0.0
2,761,272 - MPMX26_02665 0.81 -0.5
2,761,278 + MPMX26_02665 0.82 +0.3
2,761,286 - MPMX26_02665 0.83 +0.6
2,761,286 - MPMX26_02665 0.83 -0.4
2,761,296 - MPMX26_02665 0.85 -0.4
2,761,296 - MPMX26_02665 0.85 -0.8
2,761,324 - MPMX26_02665 0.89 -0.4
2,761,324 - MPMX26_02665 0.89 -1.0
2,761,324 - MPMX26_02665 0.89 -0.3
2,761,329 - MPMX26_02665 0.90 -1.6
2,761,344 - -0.4
2,761,346 - -1.2
2,761,363 - -0.1
2,761,433 - +0.2
2,761,440 + +0.0
2,761,448 + +2.6
2,761,448 + -0.4
2,761,448 + -0.6
2,761,448 + +0.9
2,761,448 - -0.6
2,761,448 - -1.5
2,761,456 - +0.3
2,761,456 - +0.3
2,761,456 - -0.0
2,761,471 - +0.2
2,761,471 - +0.8
2,761,487 - -0.4
2,761,487 - -0.2
2,761,487 - -0.0
2,761,492 - -0.1
2,761,496 - +0.5
2,761,499 - -0.2
2,761,514 - -0.1
2,761,531 - -1.1
2,761,630 - -0.3
2,761,636 - -0.2
2,761,636 - -0.2
2,761,636 - +0.4
2,761,636 - +0.0
2,761,636 - -0.3
2,761,636 - -0.0
2,761,636 - -0.1
2,761,636 - +0.2
2,761,636 - -1.0
2,761,641 - +0.5
2,761,641 - -0.3
2,761,641 - -0.6
2,761,646 - MPMX26_02666 0.10 -0.2
2,761,646 - MPMX26_02666 0.10 +0.1
2,761,673 - MPMX26_02666 0.12 -0.1
2,761,684 - MPMX26_02666 0.12 -0.1
2,761,707 - MPMX26_02666 0.13 +0.2
2,761,717 - MPMX26_02666 0.14 +0.3
2,761,754 - MPMX26_02666 0.16 -0.3
2,761,754 - MPMX26_02666 0.16 -0.5
2,761,754 - MPMX26_02666 0.16 +0.0
2,761,759 - MPMX26_02666 0.16 -0.3
2,761,768 - MPMX26_02666 0.16 +1.3
2,761,768 - MPMX26_02666 0.16 -0.2
2,761,768 - MPMX26_02666 0.16 +0.2
2,761,768 - MPMX26_02666 0.16 -0.0
2,761,793 + MPMX26_02666 0.18 -0.6
2,761,801 - MPMX26_02666 0.18 -0.7
2,761,801 - MPMX26_02666 0.18 +0.5
2,761,801 - MPMX26_02666 0.18 +0.2
2,761,801 - MPMX26_02666 0.18 +0.2
2,761,806 - MPMX26_02666 0.18 -0.3
2,761,809 - MPMX26_02666 0.18 -0.1
2,761,839 - MPMX26_02666 0.20 +0.9
2,761,847 - MPMX26_02666 0.20 +0.0
2,761,899 - MPMX26_02666 0.23 +0.2
2,761,927 - MPMX26_02666 0.24 +0.6
2,761,934 - MPMX26_02666 0.25 +0.2
2,761,936 + MPMX26_02666 0.25 -0.4
2,761,939 - MPMX26_02666 0.25 +0.4
2,761,939 - MPMX26_02666 0.25 +0.0
2,761,939 - MPMX26_02666 0.25 -0.6
2,761,939 - MPMX26_02666 0.25 -0.9
2,761,939 - MPMX26_02666 0.25 -0.2
2,761,939 - MPMX26_02666 0.25 -0.3
2,761,939 - MPMX26_02666 0.25 +0.1
2,761,941 - MPMX26_02666 0.25 -0.1
2,761,941 - MPMX26_02666 0.25 +0.1
2,761,941 - MPMX26_02666 0.25 -0.3
2,761,941 - MPMX26_02666 0.25 -1.0
2,761,941 - MPMX26_02666 0.25 +0.4
2,761,941 - MPMX26_02666 0.25 -0.2
2,761,941 - MPMX26_02666 0.25 +0.1
2,761,941 - MPMX26_02666 0.25 -0.6
2,761,941 - MPMX26_02666 0.25 +0.3
2,761,941 - MPMX26_02666 0.25 +0.1
2,761,941 - MPMX26_02666 0.25 -0.0
2,761,941 - MPMX26_02666 0.25 -0.0
2,761,944 - MPMX26_02666 0.25 -0.5
2,761,946 - MPMX26_02666 0.25 +0.6
2,761,946 - MPMX26_02666 0.25 -0.6
2,761,951 - MPMX26_02666 0.26 -0.4
2,761,951 - MPMX26_02666 0.26 -0.0
2,761,957 - MPMX26_02666 0.26 -1.4
2,761,957 - MPMX26_02666 0.26 -0.3
2,761,974 - MPMX26_02666 0.27 +0.2
2,761,974 - MPMX26_02666 0.27 +0.2
2,761,974 - MPMX26_02666 0.27 +0.0
2,761,987 - MPMX26_02666 0.27 -1.9
2,761,987 - MPMX26_02666 0.27 -0.1
2,761,992 - MPMX26_02666 0.28 -0.3
2,762,020 - MPMX26_02666 0.29 -0.2
2,762,021 - MPMX26_02666 0.29 -0.4
2,762,030 - MPMX26_02666 0.30 -2.0
2,762,046 - MPMX26_02666 0.30 -0.5
2,762,070 - MPMX26_02666 0.32 -0.5
2,762,085 - MPMX26_02666 0.32 -1.0
2,762,086 - MPMX26_02666 0.32 -0.4
2,762,095 + MPMX26_02666 0.33 -0.6
2,762,098 - MPMX26_02666 0.33 -1.6
2,762,098 - MPMX26_02666 0.33 +0.2
2,762,098 - MPMX26_02666 0.33 -0.3
2,762,103 - MPMX26_02666 0.33 -0.3
2,762,103 - MPMX26_02666 0.33 -0.2
2,762,103 - MPMX26_02666 0.33 -0.3
2,762,103 - MPMX26_02666 0.33 +0.2
2,762,129 - MPMX26_02666 0.35 -0.5
2,762,140 - MPMX26_02666 0.35 -1.2
2,762,150 - MPMX26_02666 0.36 -0.2
2,762,207 - MPMX26_02666 0.38 +0.0
2,762,207 - MPMX26_02666 0.38 -0.5
2,762,207 - MPMX26_02666 0.38 -0.4
2,762,223 - MPMX26_02666 0.39 -0.7
2,762,229 + MPMX26_02666 0.40 +1.0
2,762,235 - MPMX26_02666 0.40 +0.1
2,762,235 - MPMX26_02666 0.40 +0.9
2,762,237 - MPMX26_02666 0.40 -2.3
2,762,237 - MPMX26_02666 0.40 +0.3
2,762,237 - MPMX26_02666 0.40 +0.0
2,762,237 - MPMX26_02666 0.40 +0.2
2,762,243 - MPMX26_02666 0.40 -1.3
2,762,243 - MPMX26_02666 0.40 -0.8
2,762,252 - MPMX26_02666 0.41 -0.4
2,762,253 - MPMX26_02666 0.41 -0.3
2,762,297 - MPMX26_02666 0.43 +0.0
2,762,306 - MPMX26_02666 0.43 -1.0
2,762,315 - MPMX26_02666 0.44 -0.1
2,762,325 - MPMX26_02666 0.44 -0.1
2,762,329 - MPMX26_02666 0.45 -0.4
2,762,353 + MPMX26_02666 0.46 +0.0
2,762,387 - MPMX26_02666 0.48 -0.2

Or see this region's nucleotide sequence