Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02577

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02575 and MPMX26_02576 are separated by 135 nucleotidesMPMX26_02576 and MPMX26_02577 are separated by 23 nucleotidesMPMX26_02577 and MPMX26_02578 are separated by 103 nucleotidesMPMX26_02578 and MPMX26_02579 are separated by 96 nucleotides MPMX26_02575: MPMX26_02575 - tRNA threonylcarbamoyladenosine biosynthesis protein TsaB, at 2,667,400 to 2,668,065 _02575 MPMX26_02576: MPMX26_02576 - Protein YrdA, at 2,668,201 to 2,668,731 _02576 MPMX26_02577: MPMX26_02577 - putative Nudix hydrolase NudL, at 2,668,755 to 2,669,360 _02577 MPMX26_02578: MPMX26_02578 - NADH pyrophosphatase, at 2,669,464 to 2,670,039 _02578 MPMX26_02579: MPMX26_02579 - hypothetical protein, at 2,670,136 to 2,672,085 _02579 Position (kb) 2668 2669 2670Strain fitness (log2 ratio) -1 0 1at 2668.112 kb on - strandat 2668.222 kb on - strandat 2668.232 kb on - strandat 2668.255 kb on - strand, within MPMX26_02576at 2668.255 kb on - strand, within MPMX26_02576at 2668.255 kb on - strand, within MPMX26_02576at 2668.255 kb on - strand, within MPMX26_02576at 2668.255 kb on - strand, within MPMX26_02576at 2668.255 kb on - strand, within MPMX26_02576at 2668.255 kb on - strand, within MPMX26_02576at 2668.255 kb on - strand, within MPMX26_02576at 2668.447 kb on + strand, within MPMX26_02576at 2668.455 kb on - strand, within MPMX26_02576at 2668.464 kb on - strand, within MPMX26_02576at 2668.465 kb on - strand, within MPMX26_02576at 2668.537 kb on - strand, within MPMX26_02576at 2668.537 kb on - strand, within MPMX26_02576at 2668.539 kb on - strand, within MPMX26_02576at 2668.539 kb on - strand, within MPMX26_02576at 2668.605 kb on - strand, within MPMX26_02576at 2668.642 kb on - strand, within MPMX26_02576at 2668.642 kb on - strand, within MPMX26_02576at 2668.671 kb on - strand, within MPMX26_02576at 2668.671 kb on - strand, within MPMX26_02576at 2668.687 kb on - strandat 2668.687 kb on - strandat 2668.687 kb on - strandat 2668.687 kb on - strandat 2668.833 kb on - strand, within MPMX26_02577at 2668.833 kb on - strand, within MPMX26_02577at 2669.085 kb on - strand, within MPMX26_02577at 2669.093 kb on + strand, within MPMX26_02577at 2669.150 kb on + strand, within MPMX26_02577at 2669.204 kb on - strand, within MPMX26_02577at 2669.212 kb on - strand, within MPMX26_02577at 2669.254 kb on - strand, within MPMX26_02577at 2669.265 kb on - strand, within MPMX26_02577at 2669.294 kb on - strand, within MPMX26_02577at 2669.618 kb on + strand, within MPMX26_02578at 2669.618 kb on + strand, within MPMX26_02578at 2669.618 kb on + strand, within MPMX26_02578at 2669.646 kb on + strand, within MPMX26_02578at 2669.660 kb on + strand, within MPMX26_02578at 2669.660 kb on + strand, within MPMX26_02578at 2669.660 kb on + strand, within MPMX26_02578at 2669.670 kb on + strand, within MPMX26_02578at 2669.679 kb on + strand, within MPMX26_02578at 2669.679 kb on + strand, within MPMX26_02578at 2669.679 kb on + strand, within MPMX26_02578at 2669.720 kb on + strand, within MPMX26_02578at 2669.722 kb on + strand, within MPMX26_02578at 2669.730 kb on + strand, within MPMX26_02578at 2669.740 kb on + strand, within MPMX26_02578at 2669.782 kb on + strand, within MPMX26_02578at 2669.782 kb on + strand, within MPMX26_02578at 2669.782 kb on + strand, within MPMX26_02578at 2669.782 kb on + strand, within MPMX26_02578at 2669.784 kb on + strand, within MPMX26_02578at 2669.784 kb on + strand, within MPMX26_02578at 2669.784 kb on + strand, within MPMX26_02578at 2669.784 kb on + strand, within MPMX26_02578at 2669.784 kb on + strand, within MPMX26_02578at 2669.784 kb on + strand, within MPMX26_02578at 2669.784 kb on + strand, within MPMX26_02578at 2669.784 kb on + strand, within MPMX26_02578at 2669.784 kb on + strand, within MPMX26_02578at 2669.784 kb on + strand, within MPMX26_02578at 2669.784 kb on + strand, within MPMX26_02578at 2669.784 kb on + strand, within MPMX26_02578at 2669.784 kb on + strand, within MPMX26_02578at 2669.784 kb on + strand, within MPMX26_02578at 2669.784 kb on + strand, within MPMX26_02578at 2669.784 kb on + strand, within MPMX26_02578at 2669.784 kb on + strand, within MPMX26_02578at 2669.784 kb on + strand, within MPMX26_02578at 2669.815 kb on + strand, within MPMX26_02578at 2669.820 kb on + strand, within MPMX26_02578at 2669.832 kb on + strand, within MPMX26_02578at 2669.832 kb on + strand, within MPMX26_02578at 2669.832 kb on + strand, within MPMX26_02578at 2669.832 kb on + strand, within MPMX26_02578at 2669.832 kb on + strand, within MPMX26_02578at 2669.832 kb on + strand, within MPMX26_02578at 2669.869 kb on + strand, within MPMX26_02578at 2669.894 kb on + strand, within MPMX26_02578at 2670.019 kb on + strandat 2670.025 kb on + strandat 2670.034 kb on + strandat 2670.151 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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2,668,112 - -0.7
2,668,222 - +0.7
2,668,232 - -1.2
2,668,255 - MPMX26_02576 0.10 -0.9
2,668,255 - MPMX26_02576 0.10 +0.2
2,668,255 - MPMX26_02576 0.10 -0.0
2,668,255 - MPMX26_02576 0.10 -0.3
2,668,255 - MPMX26_02576 0.10 +0.2
2,668,255 - MPMX26_02576 0.10 +0.3
2,668,255 - MPMX26_02576 0.10 -0.7
2,668,255 - MPMX26_02576 0.10 -0.1
2,668,447 + MPMX26_02576 0.46 +0.3
2,668,455 - MPMX26_02576 0.48 -0.9
2,668,464 - MPMX26_02576 0.50 -0.1
2,668,465 - MPMX26_02576 0.50 -0.0
2,668,537 - MPMX26_02576 0.63 -0.5
2,668,537 - MPMX26_02576 0.63 -0.1
2,668,539 - MPMX26_02576 0.64 +1.4
2,668,539 - MPMX26_02576 0.64 -0.1
2,668,605 - MPMX26_02576 0.76 +0.6
2,668,642 - MPMX26_02576 0.83 -0.6
2,668,642 - MPMX26_02576 0.83 -0.1
2,668,671 - MPMX26_02576 0.89 -0.1
2,668,671 - MPMX26_02576 0.89 -0.1
2,668,687 - +0.1
2,668,687 - +0.8
2,668,687 - -0.5
2,668,687 - -0.7
2,668,833 - MPMX26_02577 0.13 +0.0
2,668,833 - MPMX26_02577 0.13 +0.2
2,669,085 - MPMX26_02577 0.54 +1.1
2,669,093 + MPMX26_02577 0.56 -1.5
2,669,150 + MPMX26_02577 0.65 -0.6
2,669,204 - MPMX26_02577 0.74 +0.0
2,669,212 - MPMX26_02577 0.75 -0.2
2,669,254 - MPMX26_02577 0.82 -0.4
2,669,265 - MPMX26_02577 0.84 -0.7
2,669,294 - MPMX26_02577 0.89 -1.5
2,669,618 + MPMX26_02578 0.27 +0.6
2,669,618 + MPMX26_02578 0.27 +0.2
2,669,618 + MPMX26_02578 0.27 -0.2
2,669,646 + MPMX26_02578 0.32 +0.5
2,669,660 + MPMX26_02578 0.34 +0.1
2,669,660 + MPMX26_02578 0.34 +0.4
2,669,660 + MPMX26_02578 0.34 -0.1
2,669,670 + MPMX26_02578 0.36 -0.2
2,669,679 + MPMX26_02578 0.37 -0.1
2,669,679 + MPMX26_02578 0.37 +0.2
2,669,679 + MPMX26_02578 0.37 -0.5
2,669,720 + MPMX26_02578 0.44 -0.2
2,669,722 + MPMX26_02578 0.45 +0.3
2,669,730 + MPMX26_02578 0.46 -0.0
2,669,740 + MPMX26_02578 0.48 -0.7
2,669,782 + MPMX26_02578 0.55 +0.9
2,669,782 + MPMX26_02578 0.55 +0.2
2,669,782 + MPMX26_02578 0.55 +0.3
2,669,782 + MPMX26_02578 0.55 -0.8
2,669,784 + MPMX26_02578 0.56 -0.5
2,669,784 + MPMX26_02578 0.56 -0.2
2,669,784 + MPMX26_02578 0.56 -0.1
2,669,784 + MPMX26_02578 0.56 +0.2
2,669,784 + MPMX26_02578 0.56 +0.0
2,669,784 + MPMX26_02578 0.56 -0.1
2,669,784 + MPMX26_02578 0.56 +0.3
2,669,784 + MPMX26_02578 0.56 +0.2
2,669,784 + MPMX26_02578 0.56 -0.8
2,669,784 + MPMX26_02578 0.56 +0.5
2,669,784 + MPMX26_02578 0.56 +0.4
2,669,784 + MPMX26_02578 0.56 -0.6
2,669,784 + MPMX26_02578 0.56 +0.5
2,669,784 + MPMX26_02578 0.56 +0.2
2,669,784 + MPMX26_02578 0.56 -0.5
2,669,784 + MPMX26_02578 0.56 +0.7
2,669,784 + MPMX26_02578 0.56 +0.1
2,669,784 + MPMX26_02578 0.56 +0.1
2,669,815 + MPMX26_02578 0.61 +0.3
2,669,820 + MPMX26_02578 0.62 -0.1
2,669,832 + MPMX26_02578 0.64 -0.4
2,669,832 + MPMX26_02578 0.64 -0.0
2,669,832 + MPMX26_02578 0.64 +0.4
2,669,832 + MPMX26_02578 0.64 +0.3
2,669,832 + MPMX26_02578 0.64 +0.3
2,669,832 + MPMX26_02578 0.64 +0.3
2,669,869 + MPMX26_02578 0.70 -0.0
2,669,894 + MPMX26_02578 0.75 -0.7
2,670,019 + -0.1
2,670,025 + -1.2
2,670,034 + -0.8
2,670,151 - -0.7

Or see this region's nucleotide sequence