Experiment: UV exposure at 150J/m2 for 20 seconds
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02575 and MPMX26_02576 are separated by 135 nucleotides MPMX26_02576 and MPMX26_02577 are separated by 23 nucleotides MPMX26_02577 and MPMX26_02578 are separated by 103 nucleotides MPMX26_02578 and MPMX26_02579 are separated by 96 nucleotides
MPMX26_02575: MPMX26_02575 - tRNA threonylcarbamoyladenosine biosynthesis protein TsaB, at 2,667,400 to 2,668,065
_02575
MPMX26_02576: MPMX26_02576 - Protein YrdA, at 2,668,201 to 2,668,731
_02576
MPMX26_02577: MPMX26_02577 - putative Nudix hydrolase NudL, at 2,668,755 to 2,669,360
_02577
MPMX26_02578: MPMX26_02578 - NADH pyrophosphatase, at 2,669,464 to 2,670,039
_02578
MPMX26_02579: MPMX26_02579 - hypothetical protein, at 2,670,136 to 2,672,085
_02579
Position (kb)
2668
2669
2670 Strain fitness (log2 ratio)
-1
0
1 at 2668.112 kb on - strand at 2668.222 kb on - strand at 2668.232 kb on - strand at 2668.255 kb on - strand, within MPMX26_02576 at 2668.255 kb on - strand, within MPMX26_02576 at 2668.255 kb on - strand, within MPMX26_02576 at 2668.255 kb on - strand, within MPMX26_02576 at 2668.255 kb on - strand, within MPMX26_02576 at 2668.255 kb on - strand, within MPMX26_02576 at 2668.255 kb on - strand, within MPMX26_02576 at 2668.255 kb on - strand, within MPMX26_02576 at 2668.447 kb on + strand, within MPMX26_02576 at 2668.455 kb on - strand, within MPMX26_02576 at 2668.464 kb on - strand, within MPMX26_02576 at 2668.465 kb on - strand, within MPMX26_02576 at 2668.537 kb on - strand, within MPMX26_02576 at 2668.537 kb on - strand, within MPMX26_02576 at 2668.539 kb on - strand, within MPMX26_02576 at 2668.539 kb on - strand, within MPMX26_02576 at 2668.605 kb on - strand, within MPMX26_02576 at 2668.642 kb on - strand, within MPMX26_02576 at 2668.642 kb on - strand, within MPMX26_02576 at 2668.671 kb on - strand, within MPMX26_02576 at 2668.671 kb on - strand, within MPMX26_02576 at 2668.687 kb on - strand at 2668.687 kb on - strand at 2668.687 kb on - strand at 2668.687 kb on - strand at 2668.833 kb on - strand, within MPMX26_02577 at 2668.833 kb on - strand, within MPMX26_02577 at 2669.085 kb on - strand, within MPMX26_02577 at 2669.093 kb on + strand, within MPMX26_02577 at 2669.150 kb on + strand, within MPMX26_02577 at 2669.204 kb on - strand, within MPMX26_02577 at 2669.212 kb on - strand, within MPMX26_02577 at 2669.254 kb on - strand, within MPMX26_02577 at 2669.265 kb on - strand, within MPMX26_02577 at 2669.294 kb on - strand, within MPMX26_02577 at 2669.618 kb on + strand, within MPMX26_02578 at 2669.618 kb on + strand, within MPMX26_02578 at 2669.618 kb on + strand, within MPMX26_02578 at 2669.646 kb on + strand, within MPMX26_02578 at 2669.660 kb on + strand, within MPMX26_02578 at 2669.660 kb on + strand, within MPMX26_02578 at 2669.660 kb on + strand, within MPMX26_02578 at 2669.670 kb on + strand, within MPMX26_02578 at 2669.679 kb on + strand, within MPMX26_02578 at 2669.679 kb on + strand, within MPMX26_02578 at 2669.679 kb on + strand, within MPMX26_02578 at 2669.720 kb on + strand, within MPMX26_02578 at 2669.722 kb on + strand, within MPMX26_02578 at 2669.730 kb on + strand, within MPMX26_02578 at 2669.740 kb on + strand, within MPMX26_02578 at 2669.782 kb on + strand, within MPMX26_02578 at 2669.782 kb on + strand, within MPMX26_02578 at 2669.782 kb on + strand, within MPMX26_02578 at 2669.782 kb on + strand, within MPMX26_02578 at 2669.784 kb on + strand, within MPMX26_02578 at 2669.784 kb on + strand, within MPMX26_02578 at 2669.784 kb on + strand, within MPMX26_02578 at 2669.784 kb on + strand, within MPMX26_02578 at 2669.784 kb on + strand, within MPMX26_02578 at 2669.784 kb on + strand, within MPMX26_02578 at 2669.784 kb on + strand, within MPMX26_02578 at 2669.784 kb on + strand, within MPMX26_02578 at 2669.784 kb on + strand, within MPMX26_02578 at 2669.784 kb on + strand, within MPMX26_02578 at 2669.784 kb on + strand, within MPMX26_02578 at 2669.784 kb on + strand, within MPMX26_02578 at 2669.784 kb on + strand, within MPMX26_02578 at 2669.784 kb on + strand, within MPMX26_02578 at 2669.784 kb on + strand, within MPMX26_02578 at 2669.784 kb on + strand, within MPMX26_02578 at 2669.784 kb on + strand, within MPMX26_02578 at 2669.784 kb on + strand, within MPMX26_02578 at 2669.815 kb on + strand, within MPMX26_02578 at 2669.820 kb on + strand, within MPMX26_02578 at 2669.832 kb on + strand, within MPMX26_02578 at 2669.832 kb on + strand, within MPMX26_02578 at 2669.832 kb on + strand, within MPMX26_02578 at 2669.832 kb on + strand, within MPMX26_02578 at 2669.832 kb on + strand, within MPMX26_02578 at 2669.832 kb on + strand, within MPMX26_02578 at 2669.869 kb on + strand, within MPMX26_02578 at 2669.894 kb on + strand, within MPMX26_02578 at 2670.019 kb on + strand at 2670.025 kb on + strand at 2670.034 kb on + strand at 2670.151 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds remove 2,668,112 - -0.7 2,668,222 - +0.7 2,668,232 - -1.2 2,668,255 - MPMX26_02576 0.10 -0.9 2,668,255 - MPMX26_02576 0.10 +0.2 2,668,255 - MPMX26_02576 0.10 -0.0 2,668,255 - MPMX26_02576 0.10 -0.3 2,668,255 - MPMX26_02576 0.10 +0.2 2,668,255 - MPMX26_02576 0.10 +0.3 2,668,255 - MPMX26_02576 0.10 -0.7 2,668,255 - MPMX26_02576 0.10 -0.1 2,668,447 + MPMX26_02576 0.46 +0.3 2,668,455 - MPMX26_02576 0.48 -0.9 2,668,464 - MPMX26_02576 0.50 -0.1 2,668,465 - MPMX26_02576 0.50 -0.0 2,668,537 - MPMX26_02576 0.63 -0.5 2,668,537 - MPMX26_02576 0.63 -0.1 2,668,539 - MPMX26_02576 0.64 +1.4 2,668,539 - MPMX26_02576 0.64 -0.1 2,668,605 - MPMX26_02576 0.76 +0.6 2,668,642 - MPMX26_02576 0.83 -0.6 2,668,642 - MPMX26_02576 0.83 -0.1 2,668,671 - MPMX26_02576 0.89 -0.1 2,668,671 - MPMX26_02576 0.89 -0.1 2,668,687 - +0.1 2,668,687 - +0.8 2,668,687 - -0.5 2,668,687 - -0.7 2,668,833 - MPMX26_02577 0.13 +0.0 2,668,833 - MPMX26_02577 0.13 +0.2 2,669,085 - MPMX26_02577 0.54 +1.1 2,669,093 + MPMX26_02577 0.56 -1.5 2,669,150 + MPMX26_02577 0.65 -0.6 2,669,204 - MPMX26_02577 0.74 +0.0 2,669,212 - MPMX26_02577 0.75 -0.2 2,669,254 - MPMX26_02577 0.82 -0.4 2,669,265 - MPMX26_02577 0.84 -0.7 2,669,294 - MPMX26_02577 0.89 -1.5 2,669,618 + MPMX26_02578 0.27 +0.6 2,669,618 + MPMX26_02578 0.27 +0.2 2,669,618 + MPMX26_02578 0.27 -0.2 2,669,646 + MPMX26_02578 0.32 +0.5 2,669,660 + MPMX26_02578 0.34 +0.1 2,669,660 + MPMX26_02578 0.34 +0.4 2,669,660 + MPMX26_02578 0.34 -0.1 2,669,670 + MPMX26_02578 0.36 -0.2 2,669,679 + MPMX26_02578 0.37 -0.1 2,669,679 + MPMX26_02578 0.37 +0.2 2,669,679 + MPMX26_02578 0.37 -0.5 2,669,720 + MPMX26_02578 0.44 -0.2 2,669,722 + MPMX26_02578 0.45 +0.3 2,669,730 + MPMX26_02578 0.46 -0.0 2,669,740 + MPMX26_02578 0.48 -0.7 2,669,782 + MPMX26_02578 0.55 +0.9 2,669,782 + MPMX26_02578 0.55 +0.2 2,669,782 + MPMX26_02578 0.55 +0.3 2,669,782 + MPMX26_02578 0.55 -0.8 2,669,784 + MPMX26_02578 0.56 -0.5 2,669,784 + MPMX26_02578 0.56 -0.2 2,669,784 + MPMX26_02578 0.56 -0.1 2,669,784 + MPMX26_02578 0.56 +0.2 2,669,784 + MPMX26_02578 0.56 +0.0 2,669,784 + MPMX26_02578 0.56 -0.1 2,669,784 + MPMX26_02578 0.56 +0.3 2,669,784 + MPMX26_02578 0.56 +0.2 2,669,784 + MPMX26_02578 0.56 -0.8 2,669,784 + MPMX26_02578 0.56 +0.5 2,669,784 + MPMX26_02578 0.56 +0.4 2,669,784 + MPMX26_02578 0.56 -0.6 2,669,784 + MPMX26_02578 0.56 +0.5 2,669,784 + MPMX26_02578 0.56 +0.2 2,669,784 + MPMX26_02578 0.56 -0.5 2,669,784 + MPMX26_02578 0.56 +0.7 2,669,784 + MPMX26_02578 0.56 +0.1 2,669,784 + MPMX26_02578 0.56 +0.1 2,669,815 + MPMX26_02578 0.61 +0.3 2,669,820 + MPMX26_02578 0.62 -0.1 2,669,832 + MPMX26_02578 0.64 -0.4 2,669,832 + MPMX26_02578 0.64 -0.0 2,669,832 + MPMX26_02578 0.64 +0.4 2,669,832 + MPMX26_02578 0.64 +0.3 2,669,832 + MPMX26_02578 0.64 +0.3 2,669,832 + MPMX26_02578 0.64 +0.3 2,669,869 + MPMX26_02578 0.70 -0.0 2,669,894 + MPMX26_02578 0.75 -0.7 2,670,019 + -0.1 2,670,025 + -1.2 2,670,034 + -0.8 2,670,151 - -0.7
Or see this region's nucleotide sequence