Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02489

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02487 and MPMX26_02488 are separated by 94 nucleotidesMPMX26_02488 and MPMX26_02489 are separated by 174 nucleotidesMPMX26_02489 and MPMX26_02490 are separated by 174 nucleotides MPMX26_02487: MPMX26_02487 - Peptidyl-prolyl cis-trans isomerase C, at 2,573,303 to 2,573,587 _02487 MPMX26_02488: MPMX26_02488 - Large-conductance mechanosensitive channel, at 2,573,682 to 2,574,128 _02488 MPMX26_02489: MPMX26_02489 - GTP-binding protein TypA/BipA, at 2,574,303 to 2,576,138 _02489 MPMX26_02490: MPMX26_02490 - Xanthine permease XanP, at 2,576,313 to 2,577,683 _02490 Position (kb) 2574 2575 2576 2577Strain fitness (log2 ratio) -2 -1 0 1at 2573.371 kb on + strand, within MPMX26_02487at 2573.372 kb on + strand, within MPMX26_02487at 2573.372 kb on + strand, within MPMX26_02487at 2573.372 kb on + strand, within MPMX26_02487at 2573.417 kb on + strand, within MPMX26_02487at 2573.419 kb on + strand, within MPMX26_02487at 2573.434 kb on + strand, within MPMX26_02487at 2573.434 kb on + strand, within MPMX26_02487at 2573.441 kb on + strand, within MPMX26_02487at 2573.441 kb on + strand, within MPMX26_02487at 2573.473 kb on + strand, within MPMX26_02487at 2573.500 kb on + strand, within MPMX26_02487at 2573.505 kb on + strand, within MPMX26_02487at 2573.514 kb on + strand, within MPMX26_02487at 2573.546 kb on + strand, within MPMX26_02487at 2573.687 kb on - strandat 2573.746 kb on - strand, within MPMX26_02488at 2573.769 kb on - strand, within MPMX26_02488at 2573.769 kb on - strand, within MPMX26_02488at 2573.805 kb on - strand, within MPMX26_02488at 2573.835 kb on - strand, within MPMX26_02488at 2573.835 kb on - strand, within MPMX26_02488at 2573.835 kb on - strand, within MPMX26_02488at 2573.884 kb on - strand, within MPMX26_02488at 2573.885 kb on - strand, within MPMX26_02488at 2573.885 kb on - strand, within MPMX26_02488at 2573.885 kb on - strand, within MPMX26_02488at 2573.894 kb on - strand, within MPMX26_02488at 2574.104 kb on - strandat 2574.384 kb on - strandat 2574.842 kb on - strand, within MPMX26_02489at 2574.852 kb on - strand, within MPMX26_02489at 2574.852 kb on - strand, within MPMX26_02489at 2574.974 kb on - strand, within MPMX26_02489at 2574.974 kb on - strand, within MPMX26_02489at 2574.974 kb on - strand, within MPMX26_02489at 2575.043 kb on - strand, within MPMX26_02489at 2575.070 kb on - strand, within MPMX26_02489at 2575.115 kb on - strand, within MPMX26_02489at 2576.120 kb on - strandat 2576.273 kb on + strandat 2576.314 kb on + strandat 2576.319 kb on + strandat 2576.319 kb on + strandat 2576.319 kb on + strandat 2576.321 kb on + strandat 2576.327 kb on + strandat 2576.327 kb on + strandat 2576.327 kb on + strandat 2576.327 kb on + strandat 2576.351 kb on + strandat 2576.355 kb on + strandat 2576.368 kb on + strandat 2576.368 kb on + strandat 2576.428 kb on + strandat 2576.449 kb on + strandat 2576.457 kb on + strand, within MPMX26_02490at 2576.457 kb on + strand, within MPMX26_02490at 2576.459 kb on + strand, within MPMX26_02490at 2576.462 kb on + strand, within MPMX26_02490at 2576.467 kb on + strand, within MPMX26_02490at 2576.467 kb on + strand, within MPMX26_02490at 2576.467 kb on + strand, within MPMX26_02490at 2576.467 kb on + strand, within MPMX26_02490at 2576.467 kb on + strand, within MPMX26_02490at 2576.522 kb on + strand, within MPMX26_02490at 2576.552 kb on + strand, within MPMX26_02490at 2576.552 kb on + strand, within MPMX26_02490at 2576.552 kb on + strand, within MPMX26_02490at 2576.552 kb on + strand, within MPMX26_02490at 2576.552 kb on + strand, within MPMX26_02490at 2576.575 kb on + strand, within MPMX26_02490at 2576.587 kb on + strand, within MPMX26_02490at 2576.587 kb on + strand, within MPMX26_02490at 2576.589 kb on + strand, within MPMX26_02490at 2576.625 kb on + strand, within MPMX26_02490at 2576.637 kb on + strand, within MPMX26_02490at 2576.637 kb on + strand, within MPMX26_02490at 2576.642 kb on + strand, within MPMX26_02490at 2576.643 kb on + strand, within MPMX26_02490at 2576.675 kb on + strand, within MPMX26_02490at 2576.727 kb on + strand, within MPMX26_02490at 2576.785 kb on + strand, within MPMX26_02490at 2576.785 kb on + strand, within MPMX26_02490at 2576.785 kb on + strand, within MPMX26_02490at 2576.790 kb on + strand, within MPMX26_02490at 2576.795 kb on + strand, within MPMX26_02490at 2576.823 kb on + strand, within MPMX26_02490at 2576.823 kb on + strand, within MPMX26_02490at 2576.823 kb on + strand, within MPMX26_02490at 2576.823 kb on + strand, within MPMX26_02490at 2576.823 kb on + strand, within MPMX26_02490at 2576.823 kb on + strand, within MPMX26_02490at 2576.897 kb on + strand, within MPMX26_02490at 2576.897 kb on + strand, within MPMX26_02490at 2576.897 kb on + strand, within MPMX26_02490at 2576.897 kb on + strand, within MPMX26_02490at 2576.897 kb on + strand, within MPMX26_02490at 2576.897 kb on + strand, within MPMX26_02490at 2576.897 kb on + strand, within MPMX26_02490at 2576.897 kb on + strand, within MPMX26_02490at 2576.899 kb on + strand, within MPMX26_02490at 2576.902 kb on + strand, within MPMX26_02490at 2576.989 kb on + strand, within MPMX26_02490at 2576.989 kb on + strand, within MPMX26_02490at 2576.989 kb on + strand, within MPMX26_02490at 2577.046 kb on + strand, within MPMX26_02490at 2577.066 kb on + strand, within MPMX26_02490at 2577.078 kb on + strand, within MPMX26_02490at 2577.078 kb on + strand, within MPMX26_02490at 2577.078 kb on + strand, within MPMX26_02490at 2577.114 kb on + strand, within MPMX26_02490

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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2,573,371 + MPMX26_02487 0.24 -0.2
2,573,372 + MPMX26_02487 0.24 +0.1
2,573,372 + MPMX26_02487 0.24 -0.4
2,573,372 + MPMX26_02487 0.24 +0.3
2,573,417 + MPMX26_02487 0.40 +0.2
2,573,419 + MPMX26_02487 0.41 -0.0
2,573,434 + MPMX26_02487 0.46 -0.1
2,573,434 + MPMX26_02487 0.46 -0.7
2,573,441 + MPMX26_02487 0.48 +0.1
2,573,441 + MPMX26_02487 0.48 +0.1
2,573,473 + MPMX26_02487 0.60 +0.9
2,573,500 + MPMX26_02487 0.69 +0.5
2,573,505 + MPMX26_02487 0.71 +0.2
2,573,514 + MPMX26_02487 0.74 -0.7
2,573,546 + MPMX26_02487 0.85 -0.3
2,573,687 - +0.8
2,573,746 - MPMX26_02488 0.14 -0.4
2,573,769 - MPMX26_02488 0.19 +0.4
2,573,769 - MPMX26_02488 0.19 +0.9
2,573,805 - MPMX26_02488 0.28 -0.2
2,573,835 - MPMX26_02488 0.34 +0.1
2,573,835 - MPMX26_02488 0.34 -0.4
2,573,835 - MPMX26_02488 0.34 +0.1
2,573,884 - MPMX26_02488 0.45 +0.1
2,573,885 - MPMX26_02488 0.45 -0.2
2,573,885 - MPMX26_02488 0.45 +0.1
2,573,885 - MPMX26_02488 0.45 -0.2
2,573,894 - MPMX26_02488 0.47 +0.1
2,574,104 - +0.9
2,574,384 - +0.6
2,574,842 - MPMX26_02489 0.29 -0.4
2,574,852 - MPMX26_02489 0.30 +0.0
2,574,852 - MPMX26_02489 0.30 -0.7
2,574,974 - MPMX26_02489 0.37 +1.6
2,574,974 - MPMX26_02489 0.37 +0.0
2,574,974 - MPMX26_02489 0.37 +0.0
2,575,043 - MPMX26_02489 0.40 -0.4
2,575,070 - MPMX26_02489 0.42 +0.0
2,575,115 - MPMX26_02489 0.44 +1.6
2,576,120 - +0.6
2,576,273 + -0.8
2,576,314 + -0.1
2,576,319 + +0.1
2,576,319 + -0.1
2,576,319 + -0.6
2,576,321 + +0.5
2,576,327 + -0.0
2,576,327 + -0.4
2,576,327 + +0.0
2,576,327 + +0.4
2,576,351 + -0.6
2,576,355 + -0.3
2,576,368 + +0.1
2,576,368 + -0.3
2,576,428 + -0.3
2,576,449 + -0.2
2,576,457 + MPMX26_02490 0.11 -0.2
2,576,457 + MPMX26_02490 0.11 -0.2
2,576,459 + MPMX26_02490 0.11 -0.5
2,576,462 + MPMX26_02490 0.11 -1.2
2,576,467 + MPMX26_02490 0.11 -0.7
2,576,467 + MPMX26_02490 0.11 -0.2
2,576,467 + MPMX26_02490 0.11 -1.2
2,576,467 + MPMX26_02490 0.11 +0.2
2,576,467 + MPMX26_02490 0.11 -0.2
2,576,522 + MPMX26_02490 0.15 -0.4
2,576,552 + MPMX26_02490 0.17 -0.3
2,576,552 + MPMX26_02490 0.17 -0.7
2,576,552 + MPMX26_02490 0.17 -0.0
2,576,552 + MPMX26_02490 0.17 +0.5
2,576,552 + MPMX26_02490 0.17 +1.0
2,576,575 + MPMX26_02490 0.19 +0.2
2,576,587 + MPMX26_02490 0.20 +0.3
2,576,587 + MPMX26_02490 0.20 +0.0
2,576,589 + MPMX26_02490 0.20 +0.1
2,576,625 + MPMX26_02490 0.23 -0.3
2,576,637 + MPMX26_02490 0.24 -0.5
2,576,637 + MPMX26_02490 0.24 -1.1
2,576,642 + MPMX26_02490 0.24 +0.0
2,576,643 + MPMX26_02490 0.24 +0.1
2,576,675 + MPMX26_02490 0.26 +0.1
2,576,727 + MPMX26_02490 0.30 +0.5
2,576,785 + MPMX26_02490 0.34 -2.5
2,576,785 + MPMX26_02490 0.34 -0.5
2,576,785 + MPMX26_02490 0.34 +0.3
2,576,790 + MPMX26_02490 0.35 +0.1
2,576,795 + MPMX26_02490 0.35 -0.3
2,576,823 + MPMX26_02490 0.37 -0.1
2,576,823 + MPMX26_02490 0.37 -0.2
2,576,823 + MPMX26_02490 0.37 -0.1
2,576,823 + MPMX26_02490 0.37 -1.1
2,576,823 + MPMX26_02490 0.37 +0.9
2,576,823 + MPMX26_02490 0.37 -0.1
2,576,897 + MPMX26_02490 0.43 +0.5
2,576,897 + MPMX26_02490 0.43 -0.6
2,576,897 + MPMX26_02490 0.43 -0.5
2,576,897 + MPMX26_02490 0.43 -0.0
2,576,897 + MPMX26_02490 0.43 +0.5
2,576,897 + MPMX26_02490 0.43 +0.5
2,576,897 + MPMX26_02490 0.43 +0.5
2,576,897 + MPMX26_02490 0.43 -0.6
2,576,899 + MPMX26_02490 0.43 +0.1
2,576,902 + MPMX26_02490 0.43 -0.7
2,576,989 + MPMX26_02490 0.49 -0.4
2,576,989 + MPMX26_02490 0.49 +0.9
2,576,989 + MPMX26_02490 0.49 +0.6
2,577,046 + MPMX26_02490 0.53 -0.3
2,577,066 + MPMX26_02490 0.55 +0.9
2,577,078 + MPMX26_02490 0.56 +0.3
2,577,078 + MPMX26_02490 0.56 -0.7
2,577,078 + MPMX26_02490 0.56 -0.3
2,577,114 + MPMX26_02490 0.58 -0.4

Or see this region's nucleotide sequence