Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02421

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02419 and MPMX26_02420 are separated by 120 nucleotidesMPMX26_02420 and MPMX26_02421 are separated by 60 nucleotidesMPMX26_02421 and MPMX26_02422 are separated by 2 nucleotidesMPMX26_02422 and MPMX26_02423 are separated by 128 nucleotidesMPMX26_02423 and MPMX26_02424 are separated by 64 nucleotides MPMX26_02419: MPMX26_02419 - hypothetical protein, at 2,504,355 to 2,505,404 _02419 MPMX26_02420: MPMX26_02420 - septum site-determining protein MinC, at 2,505,525 to 2,506,226 _02420 MPMX26_02421: MPMX26_02421 - Septum site-determining protein MinD, at 2,506,287 to 2,507,099 _02421 MPMX26_02422: MPMX26_02422 - Cell division topological specificity factor, at 2,507,102 to 2,507,374 _02422 MPMX26_02423: MPMX26_02423 - hypothetical protein, at 2,507,503 to 2,507,790 _02423 MPMX26_02424: MPMX26_02424 - hypothetical protein, at 2,507,855 to 2,510,986 _02424 Position (kb) 2506 2507 2508Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 2505.399 kb on + strandat 2505.554 kb on + strandat 2505.702 kb on + strand, within MPMX26_02420at 2505.725 kb on + strand, within MPMX26_02420at 2505.756 kb on + strand, within MPMX26_02420at 2505.761 kb on + strand, within MPMX26_02420at 2505.771 kb on + strand, within MPMX26_02420at 2505.783 kb on + strand, within MPMX26_02420at 2505.797 kb on + strand, within MPMX26_02420at 2505.938 kb on + strand, within MPMX26_02420at 2505.939 kb on + strand, within MPMX26_02420at 2505.939 kb on + strand, within MPMX26_02420at 2505.939 kb on + strand, within MPMX26_02420at 2505.939 kb on + strand, within MPMX26_02420at 2506.059 kb on + strand, within MPMX26_02420at 2506.059 kb on + strand, within MPMX26_02420at 2506.059 kb on + strand, within MPMX26_02420at 2506.061 kb on + strand, within MPMX26_02420at 2506.113 kb on + strand, within MPMX26_02420at 2506.119 kb on + strand, within MPMX26_02420at 2506.119 kb on + strand, within MPMX26_02420at 2506.119 kb on + strand, within MPMX26_02420at 2506.119 kb on + strand, within MPMX26_02420at 2506.119 kb on + strand, within MPMX26_02420at 2506.119 kb on + strand, within MPMX26_02420at 2506.119 kb on + strand, within MPMX26_02420at 2506.121 kb on + strand, within MPMX26_02420at 2506.329 kb on + strandat 2506.362 kb on + strandat 2506.362 kb on + strandat 2506.362 kb on + strandat 2506.362 kb on + strandat 2506.362 kb on + strandat 2506.455 kb on + strand, within MPMX26_02421at 2506.455 kb on + strand, within MPMX26_02421at 2506.455 kb on + strand, within MPMX26_02421at 2506.455 kb on + strand, within MPMX26_02421at 2506.455 kb on + strand, within MPMX26_02421at 2506.455 kb on + strand, within MPMX26_02421at 2506.503 kb on + strand, within MPMX26_02421at 2506.503 kb on + strand, within MPMX26_02421at 2506.503 kb on + strand, within MPMX26_02421at 2506.503 kb on + strand, within MPMX26_02421at 2506.503 kb on + strand, within MPMX26_02421at 2506.503 kb on + strand, within MPMX26_02421at 2506.503 kb on + strand, within MPMX26_02421at 2506.503 kb on + strand, within MPMX26_02421at 2506.560 kb on + strand, within MPMX26_02421at 2506.560 kb on + strand, within MPMX26_02421at 2506.581 kb on + strand, within MPMX26_02421at 2506.581 kb on + strand, within MPMX26_02421at 2506.581 kb on + strand, within MPMX26_02421at 2506.581 kb on + strand, within MPMX26_02421at 2506.598 kb on + strand, within MPMX26_02421at 2506.666 kb on + strand, within MPMX26_02421at 2506.666 kb on + strand, within MPMX26_02421at 2506.666 kb on + strand, within MPMX26_02421at 2506.666 kb on + strand, within MPMX26_02421at 2506.671 kb on + strand, within MPMX26_02421at 2506.671 kb on + strand, within MPMX26_02421at 2506.671 kb on + strand, within MPMX26_02421at 2506.682 kb on + strand, within MPMX26_02421at 2506.682 kb on + strand, within MPMX26_02421at 2506.682 kb on + strand, within MPMX26_02421at 2506.709 kb on + strand, within MPMX26_02421at 2506.731 kb on + strand, within MPMX26_02421at 2506.812 kb on + strand, within MPMX26_02421at 2506.817 kb on + strand, within MPMX26_02421at 2506.842 kb on + strand, within MPMX26_02421at 2506.842 kb on + strand, within MPMX26_02421at 2506.842 kb on + strand, within MPMX26_02421at 2506.927 kb on + strand, within MPMX26_02421at 2506.932 kb on + strand, within MPMX26_02421at 2506.935 kb on + strand, within MPMX26_02421at 2506.968 kb on + strand, within MPMX26_02421at 2506.968 kb on + strand, within MPMX26_02421at 2506.977 kb on + strand, within MPMX26_02421at 2506.977 kb on + strand, within MPMX26_02421at 2506.977 kb on + strand, within MPMX26_02421at 2506.997 kb on + strand, within MPMX26_02421at 2506.997 kb on + strand, within MPMX26_02421at 2506.997 kb on + strand, within MPMX26_02421at 2506.997 kb on + strand, within MPMX26_02421at 2506.997 kb on + strand, within MPMX26_02421at 2506.997 kb on + strand, within MPMX26_02421at 2506.997 kb on + strand, within MPMX26_02421at 2506.997 kb on + strand, within MPMX26_02421at 2506.997 kb on + strand, within MPMX26_02421at 2506.997 kb on + strand, within MPMX26_02421at 2506.997 kb on + strand, within MPMX26_02421at 2507.069 kb on + strandat 2507.074 kb on + strandat 2507.441 kb on + strandat 2507.479 kb on + strandat 2507.540 kb on + strand, within MPMX26_02423at 2507.574 kb on + strand, within MPMX26_02423at 2507.599 kb on + strand, within MPMX26_02423at 2507.599 kb on + strand, within MPMX26_02423at 2507.620 kb on + strand, within MPMX26_02423at 2507.667 kb on + strand, within MPMX26_02423at 2507.696 kb on + strand, within MPMX26_02423at 2507.709 kb on + strand, within MPMX26_02423at 2507.879 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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2,505,399 + +0.1
2,505,554 + -0.6
2,505,702 + MPMX26_02420 0.25 -0.6
2,505,725 + MPMX26_02420 0.28 -0.3
2,505,756 + MPMX26_02420 0.33 -0.2
2,505,761 + MPMX26_02420 0.34 +0.1
2,505,771 + MPMX26_02420 0.35 -0.7
2,505,783 + MPMX26_02420 0.37 -1.8
2,505,797 + MPMX26_02420 0.39 -1.7
2,505,938 + MPMX26_02420 0.59 -2.2
2,505,939 + MPMX26_02420 0.59 -0.1
2,505,939 + MPMX26_02420 0.59 -1.0
2,505,939 + MPMX26_02420 0.59 -0.3
2,505,939 + MPMX26_02420 0.59 -1.7
2,506,059 + MPMX26_02420 0.76 -1.3
2,506,059 + MPMX26_02420 0.76 -1.2
2,506,059 + MPMX26_02420 0.76 +0.1
2,506,061 + MPMX26_02420 0.76 -1.5
2,506,113 + MPMX26_02420 0.84 -1.1
2,506,119 + MPMX26_02420 0.85 -1.1
2,506,119 + MPMX26_02420 0.85 +0.5
2,506,119 + MPMX26_02420 0.85 -1.4
2,506,119 + MPMX26_02420 0.85 -1.9
2,506,119 + MPMX26_02420 0.85 -0.3
2,506,119 + MPMX26_02420 0.85 +0.1
2,506,119 + MPMX26_02420 0.85 -0.6
2,506,121 + MPMX26_02420 0.85 -0.8
2,506,329 + -1.6
2,506,362 + -0.8
2,506,362 + -0.8
2,506,362 + -0.7
2,506,362 + -1.0
2,506,362 + -1.2
2,506,455 + MPMX26_02421 0.21 -1.7
2,506,455 + MPMX26_02421 0.21 -1.3
2,506,455 + MPMX26_02421 0.21 -0.3
2,506,455 + MPMX26_02421 0.21 -0.8
2,506,455 + MPMX26_02421 0.21 -1.9
2,506,455 + MPMX26_02421 0.21 -2.0
2,506,503 + MPMX26_02421 0.27 -0.7
2,506,503 + MPMX26_02421 0.27 -0.8
2,506,503 + MPMX26_02421 0.27 -0.7
2,506,503 + MPMX26_02421 0.27 -0.9
2,506,503 + MPMX26_02421 0.27 -0.2
2,506,503 + MPMX26_02421 0.27 -1.1
2,506,503 + MPMX26_02421 0.27 -1.3
2,506,503 + MPMX26_02421 0.27 -0.8
2,506,560 + MPMX26_02421 0.34 -1.2
2,506,560 + MPMX26_02421 0.34 -0.9
2,506,581 + MPMX26_02421 0.36 -0.5
2,506,581 + MPMX26_02421 0.36 -0.9
2,506,581 + MPMX26_02421 0.36 -0.5
2,506,581 + MPMX26_02421 0.36 -1.3
2,506,598 + MPMX26_02421 0.38 -1.3
2,506,666 + MPMX26_02421 0.47 -1.3
2,506,666 + MPMX26_02421 0.47 -1.4
2,506,666 + MPMX26_02421 0.47 -1.1
2,506,666 + MPMX26_02421 0.47 -2.1
2,506,671 + MPMX26_02421 0.47 -2.3
2,506,671 + MPMX26_02421 0.47 -0.5
2,506,671 + MPMX26_02421 0.47 +0.4
2,506,682 + MPMX26_02421 0.49 -1.0
2,506,682 + MPMX26_02421 0.49 -1.5
2,506,682 + MPMX26_02421 0.49 -0.7
2,506,709 + MPMX26_02421 0.52 -1.1
2,506,731 + MPMX26_02421 0.55 -0.4
2,506,812 + MPMX26_02421 0.65 -0.9
2,506,817 + MPMX26_02421 0.65 -0.9
2,506,842 + MPMX26_02421 0.68 -1.9
2,506,842 + MPMX26_02421 0.68 -4.0
2,506,842 + MPMX26_02421 0.68 -1.4
2,506,927 + MPMX26_02421 0.79 -1.5
2,506,932 + MPMX26_02421 0.79 -1.7
2,506,935 + MPMX26_02421 0.80 -1.0
2,506,968 + MPMX26_02421 0.84 -1.6
2,506,968 + MPMX26_02421 0.84 -1.0
2,506,977 + MPMX26_02421 0.85 -0.5
2,506,977 + MPMX26_02421 0.85 +0.2
2,506,977 + MPMX26_02421 0.85 -1.4
2,506,997 + MPMX26_02421 0.87 -2.4
2,506,997 + MPMX26_02421 0.87 -1.6
2,506,997 + MPMX26_02421 0.87 -0.9
2,506,997 + MPMX26_02421 0.87 -0.8
2,506,997 + MPMX26_02421 0.87 -0.3
2,506,997 + MPMX26_02421 0.87 -0.2
2,506,997 + MPMX26_02421 0.87 -1.0
2,506,997 + MPMX26_02421 0.87 -0.8
2,506,997 + MPMX26_02421 0.87 -1.2
2,506,997 + MPMX26_02421 0.87 -1.5
2,506,997 + MPMX26_02421 0.87 -1.9
2,507,069 + -2.2
2,507,074 + -0.9
2,507,441 + -0.1
2,507,479 + +0.8
2,507,540 + MPMX26_02423 0.13 +0.5
2,507,574 + MPMX26_02423 0.25 +0.6
2,507,599 + MPMX26_02423 0.33 -0.5
2,507,599 + MPMX26_02423 0.33 -0.4
2,507,620 + MPMX26_02423 0.41 -0.8
2,507,667 + MPMX26_02423 0.57 -0.2
2,507,696 + MPMX26_02423 0.67 +0.3
2,507,709 + MPMX26_02423 0.72 -0.1
2,507,879 - +0.1

Or see this region's nucleotide sequence