Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02405

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02403 and MPMX26_02404 are separated by 59 nucleotidesMPMX26_02404 and MPMX26_02405 are separated by 123 nucleotidesMPMX26_02405 and MPMX26_02406 are separated by 28 nucleotides MPMX26_02403: MPMX26_02403 - hypothetical protein, at 2,486,301 to 2,489,903 _02403 MPMX26_02404: MPMX26_02404 - Pyridoxal phosphate homeostasis protein, at 2,489,963 to 2,490,658 _02404 MPMX26_02405: MPMX26_02405 - Twitching mobility protein, at 2,490,782 to 2,491,819 _02405 MPMX26_02406: MPMX26_02406 - Twitching mobility protein, at 2,491,848 to 2,492,966 _02406 Position (kb) 2490 2491 2492Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2at 2489.984 kb on - strandat 2490.001 kb on - strandat 2490.011 kb on - strandat 2490.011 kb on - strandat 2490.011 kb on - strandat 2490.011 kb on - strandat 2490.011 kb on - strandat 2490.011 kb on - strandat 2490.011 kb on - strandat 2490.017 kb on - strandat 2490.050 kb on - strand, within MPMX26_02404at 2490.076 kb on - strand, within MPMX26_02404at 2490.103 kb on - strand, within MPMX26_02404at 2490.113 kb on - strand, within MPMX26_02404at 2490.122 kb on - strand, within MPMX26_02404at 2490.158 kb on - strand, within MPMX26_02404at 2490.158 kb on - strand, within MPMX26_02404at 2490.221 kb on - strand, within MPMX26_02404at 2490.221 kb on - strand, within MPMX26_02404at 2490.241 kb on - strand, within MPMX26_02404at 2490.241 kb on - strand, within MPMX26_02404at 2490.248 kb on - strand, within MPMX26_02404at 2490.281 kb on - strand, within MPMX26_02404at 2490.301 kb on - strand, within MPMX26_02404at 2490.301 kb on - strand, within MPMX26_02404at 2490.318 kb on - strand, within MPMX26_02404at 2490.325 kb on - strand, within MPMX26_02404at 2490.332 kb on - strand, within MPMX26_02404at 2490.337 kb on - strand, within MPMX26_02404at 2490.347 kb on - strand, within MPMX26_02404at 2490.412 kb on - strand, within MPMX26_02404at 2490.482 kb on - strand, within MPMX26_02404at 2490.521 kb on - strand, within MPMX26_02404at 2490.602 kb on - strandat 2490.917 kb on + strand, within MPMX26_02405at 2490.917 kb on + strand, within MPMX26_02405at 2490.917 kb on + strand, within MPMX26_02405at 2490.917 kb on + strand, within MPMX26_02405at 2490.917 kb on + strand, within MPMX26_02405at 2490.917 kb on + strand, within MPMX26_02405at 2490.917 kb on + strand, within MPMX26_02405at 2490.917 kb on + strand, within MPMX26_02405at 2490.917 kb on + strand, within MPMX26_02405at 2490.917 kb on + strand, within MPMX26_02405at 2490.917 kb on + strand, within MPMX26_02405at 2490.932 kb on + strand, within MPMX26_02405at 2490.932 kb on + strand, within MPMX26_02405at 2491.040 kb on + strand, within MPMX26_02405at 2491.045 kb on + strand, within MPMX26_02405at 2491.048 kb on + strand, within MPMX26_02405at 2491.066 kb on + strand, within MPMX26_02405at 2491.088 kb on + strand, within MPMX26_02405at 2491.093 kb on + strand, within MPMX26_02405at 2491.103 kb on + strand, within MPMX26_02405at 2491.141 kb on + strand, within MPMX26_02405at 2491.152 kb on + strand, within MPMX26_02405at 2491.157 kb on + strand, within MPMX26_02405at 2491.157 kb on + strand, within MPMX26_02405at 2491.297 kb on + strand, within MPMX26_02405at 2491.318 kb on + strand, within MPMX26_02405at 2491.318 kb on + strand, within MPMX26_02405at 2491.348 kb on + strand, within MPMX26_02405at 2491.348 kb on + strand, within MPMX26_02405at 2491.348 kb on + strand, within MPMX26_02405at 2491.367 kb on + strand, within MPMX26_02405at 2491.416 kb on + strand, within MPMX26_02405at 2491.453 kb on + strand, within MPMX26_02405at 2491.453 kb on + strand, within MPMX26_02405at 2491.453 kb on + strand, within MPMX26_02405at 2491.460 kb on + strand, within MPMX26_02405at 2491.465 kb on + strand, within MPMX26_02405at 2491.543 kb on + strand, within MPMX26_02405at 2491.647 kb on + strand, within MPMX26_02405at 2491.647 kb on + strand, within MPMX26_02405at 2491.654 kb on + strand, within MPMX26_02405at 2491.654 kb on + strand, within MPMX26_02405at 2491.666 kb on + strand, within MPMX26_02405at 2491.681 kb on + strand, within MPMX26_02405at 2491.681 kb on + strand, within MPMX26_02405at 2491.684 kb on + strand, within MPMX26_02405at 2491.694 kb on + strand, within MPMX26_02405at 2491.694 kb on + strand, within MPMX26_02405at 2491.694 kb on + strand, within MPMX26_02405at 2491.694 kb on + strand, within MPMX26_02405at 2491.694 kb on + strand, within MPMX26_02405at 2491.694 kb on + strand, within MPMX26_02405at 2491.708 kb on + strand, within MPMX26_02405at 2491.718 kb on + strandat 2491.722 kb on + strandat 2491.753 kb on + strandat 2491.901 kb on + strandat 2491.901 kb on + strandat 2491.901 kb on + strandat 2491.917 kb on + strandat 2492.096 kb on + strand, within MPMX26_02406at 2492.133 kb on + strand, within MPMX26_02406at 2492.164 kb on + strand, within MPMX26_02406at 2492.199 kb on + strand, within MPMX26_02406at 2492.204 kb on + strand, within MPMX26_02406at 2492.204 kb on + strand, within MPMX26_02406at 2492.204 kb on + strand, within MPMX26_02406at 2492.204 kb on + strand, within MPMX26_02406at 2492.294 kb on + strand, within MPMX26_02406at 2492.312 kb on + strand, within MPMX26_02406at 2492.365 kb on + strand, within MPMX26_02406at 2492.497 kb on + strand, within MPMX26_02406at 2492.571 kb on + strand, within MPMX26_02406at 2492.606 kb on + strand, within MPMX26_02406at 2492.649 kb on + strand, within MPMX26_02406at 2492.651 kb on + strand, within MPMX26_02406at 2492.666 kb on + strand, within MPMX26_02406at 2492.676 kb on + strand, within MPMX26_02406at 2492.676 kb on + strand, within MPMX26_02406at 2492.702 kb on + strand, within MPMX26_02406at 2492.724 kb on + strand, within MPMX26_02406at 2492.739 kb on + strand, within MPMX26_02406at 2492.739 kb on + strand, within MPMX26_02406at 2492.765 kb on + strand, within MPMX26_02406at 2492.771 kb on + strand, within MPMX26_02406at 2492.808 kb on + strand, within MPMX26_02406

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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2,489,984 - -0.1
2,490,001 - +0.2
2,490,011 - -0.3
2,490,011 - -0.8
2,490,011 - +0.0
2,490,011 - -0.2
2,490,011 - -0.5
2,490,011 - +0.2
2,490,011 - +0.0
2,490,017 - -0.3
2,490,050 - MPMX26_02404 0.12 -0.1
2,490,076 - MPMX26_02404 0.16 +0.8
2,490,103 - MPMX26_02404 0.20 -0.1
2,490,113 - MPMX26_02404 0.22 -0.5
2,490,122 - MPMX26_02404 0.23 +0.3
2,490,158 - MPMX26_02404 0.28 -0.6
2,490,158 - MPMX26_02404 0.28 +0.5
2,490,221 - MPMX26_02404 0.37 -0.3
2,490,221 - MPMX26_02404 0.37 +0.1
2,490,241 - MPMX26_02404 0.40 -0.3
2,490,241 - MPMX26_02404 0.40 -0.0
2,490,248 - MPMX26_02404 0.41 +0.7
2,490,281 - MPMX26_02404 0.46 +0.2
2,490,301 - MPMX26_02404 0.49 +0.1
2,490,301 - MPMX26_02404 0.49 +0.6
2,490,318 - MPMX26_02404 0.51 -1.3
2,490,325 - MPMX26_02404 0.52 -1.0
2,490,332 - MPMX26_02404 0.53 +0.1
2,490,337 - MPMX26_02404 0.54 -0.3
2,490,347 - MPMX26_02404 0.55 +0.4
2,490,412 - MPMX26_02404 0.65 +0.4
2,490,482 - MPMX26_02404 0.75 -0.3
2,490,521 - MPMX26_02404 0.80 +0.4
2,490,602 - +0.2
2,490,917 + MPMX26_02405 0.13 -0.5
2,490,917 + MPMX26_02405 0.13 -1.2
2,490,917 + MPMX26_02405 0.13 -3.0
2,490,917 + MPMX26_02405 0.13 -1.1
2,490,917 + MPMX26_02405 0.13 -3.1
2,490,917 + MPMX26_02405 0.13 -2.3
2,490,917 + MPMX26_02405 0.13 -1.2
2,490,917 + MPMX26_02405 0.13 -2.1
2,490,917 + MPMX26_02405 0.13 -3.7
2,490,917 + MPMX26_02405 0.13 -3.2
2,490,917 + MPMX26_02405 0.13 -2.6
2,490,932 + MPMX26_02405 0.14 -2.1
2,490,932 + MPMX26_02405 0.14 -1.8
2,491,040 + MPMX26_02405 0.25 -1.3
2,491,045 + MPMX26_02405 0.25 -2.9
2,491,048 + MPMX26_02405 0.26 -2.6
2,491,066 + MPMX26_02405 0.27 -2.3
2,491,088 + MPMX26_02405 0.29 -1.9
2,491,093 + MPMX26_02405 0.30 -1.6
2,491,103 + MPMX26_02405 0.31 -0.2
2,491,141 + MPMX26_02405 0.35 -2.0
2,491,152 + MPMX26_02405 0.36 -2.7
2,491,157 + MPMX26_02405 0.36 -1.6
2,491,157 + MPMX26_02405 0.36 -2.2
2,491,297 + MPMX26_02405 0.50 -2.2
2,491,318 + MPMX26_02405 0.52 -1.7
2,491,318 + MPMX26_02405 0.52 -3.5
2,491,348 + MPMX26_02405 0.55 -2.7
2,491,348 + MPMX26_02405 0.55 -2.4
2,491,348 + MPMX26_02405 0.55 -2.3
2,491,367 + MPMX26_02405 0.56 -2.2
2,491,416 + MPMX26_02405 0.61 -1.5
2,491,453 + MPMX26_02405 0.65 -1.5
2,491,453 + MPMX26_02405 0.65 -2.3
2,491,453 + MPMX26_02405 0.65 -2.3
2,491,460 + MPMX26_02405 0.65 -2.2
2,491,465 + MPMX26_02405 0.66 -2.0
2,491,543 + MPMX26_02405 0.73 -1.7
2,491,647 + MPMX26_02405 0.83 -2.2
2,491,647 + MPMX26_02405 0.83 -5.0
2,491,654 + MPMX26_02405 0.84 -3.2
2,491,654 + MPMX26_02405 0.84 -0.8
2,491,666 + MPMX26_02405 0.85 -2.7
2,491,681 + MPMX26_02405 0.87 -1.9
2,491,681 + MPMX26_02405 0.87 -1.8
2,491,684 + MPMX26_02405 0.87 -1.8
2,491,694 + MPMX26_02405 0.88 -1.3
2,491,694 + MPMX26_02405 0.88 -3.4
2,491,694 + MPMX26_02405 0.88 -1.8
2,491,694 + MPMX26_02405 0.88 -1.4
2,491,694 + MPMX26_02405 0.88 -2.4
2,491,694 + MPMX26_02405 0.88 -2.6
2,491,708 + MPMX26_02405 0.89 -2.1
2,491,718 + -2.8
2,491,722 + -2.3
2,491,753 + -2.6
2,491,901 + +0.5
2,491,901 + -0.3
2,491,901 + -0.6
2,491,917 + +2.1
2,492,096 + MPMX26_02406 0.22 -0.2
2,492,133 + MPMX26_02406 0.25 -0.2
2,492,164 + MPMX26_02406 0.28 +1.1
2,492,199 + MPMX26_02406 0.31 +0.2
2,492,204 + MPMX26_02406 0.32 -0.6
2,492,204 + MPMX26_02406 0.32 -1.0
2,492,204 + MPMX26_02406 0.32 -0.5
2,492,204 + MPMX26_02406 0.32 -3.5
2,492,294 + MPMX26_02406 0.40 +0.5
2,492,312 + MPMX26_02406 0.41 -0.2
2,492,365 + MPMX26_02406 0.46 -0.6
2,492,497 + MPMX26_02406 0.58 -0.3
2,492,571 + MPMX26_02406 0.65 -0.3
2,492,606 + MPMX26_02406 0.68 -1.1
2,492,649 + MPMX26_02406 0.72 -0.5
2,492,651 + MPMX26_02406 0.72 -0.4
2,492,666 + MPMX26_02406 0.73 -0.3
2,492,676 + MPMX26_02406 0.74 -0.2
2,492,676 + MPMX26_02406 0.74 +0.4
2,492,702 + MPMX26_02406 0.76 -0.3
2,492,724 + MPMX26_02406 0.78 -0.6
2,492,739 + MPMX26_02406 0.80 -0.7
2,492,739 + MPMX26_02406 0.80 -0.1
2,492,765 + MPMX26_02406 0.82 -0.3
2,492,771 + MPMX26_02406 0.82 -0.4
2,492,808 + MPMX26_02406 0.86 -0.1

Or see this region's nucleotide sequence