Experiment: UV exposure at 150J/m2 for 20 seconds
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02399 and MPMX26_02400 are separated by 10 nucleotides MPMX26_02400 and MPMX26_02401 are separated by 18 nucleotides MPMX26_02401 and MPMX26_02402 are separated by 424 nucleotides
MPMX26_02399: MPMX26_02399 - Glycine oxidase, at 2,482,058 to 2,483,191
_02399
MPMX26_02400: MPMX26_02400 - Epimerase family protein, at 2,483,202 to 2,484,116
_02400
MPMX26_02401: MPMX26_02401 - hypothetical protein, at 2,484,135 to 2,484,590
_02401
MPMX26_02402: MPMX26_02402 - Nuclease SbcCD subunit D, at 2,485,015 to 2,486,304
_02402
Position (kb)
2484
2485 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2483.145 kb on + strand at 2483.170 kb on + strand at 2483.357 kb on - strand, within MPMX26_02400 at 2483.357 kb on - strand, within MPMX26_02400 at 2483.369 kb on - strand, within MPMX26_02400 at 2483.445 kb on - strand, within MPMX26_02400 at 2483.447 kb on - strand, within MPMX26_02400 at 2483.447 kb on - strand, within MPMX26_02400 at 2483.447 kb on - strand, within MPMX26_02400 at 2483.447 kb on - strand, within MPMX26_02400 at 2483.447 kb on - strand, within MPMX26_02400 at 2483.447 kb on - strand, within MPMX26_02400 at 2483.619 kb on - strand, within MPMX26_02400 at 2483.696 kb on - strand, within MPMX26_02400 at 2483.708 kb on - strand, within MPMX26_02400 at 2483.784 kb on - strand, within MPMX26_02400 at 2483.792 kb on - strand, within MPMX26_02400 at 2483.803 kb on - strand, within MPMX26_02400 at 2483.813 kb on - strand, within MPMX26_02400 at 2483.813 kb on - strand, within MPMX26_02400 at 2483.909 kb on - strand, within MPMX26_02400 at 2484.095 kb on - strand at 2484.171 kb on - strand at 2484.171 kb on - strand at 2484.228 kb on - strand, within MPMX26_02401 at 2484.412 kb on - strand, within MPMX26_02401 at 2484.425 kb on - strand, within MPMX26_02401 at 2484.425 kb on - strand, within MPMX26_02401 at 2484.425 kb on - strand, within MPMX26_02401 at 2484.425 kb on - strand, within MPMX26_02401 at 2484.443 kb on - strand, within MPMX26_02401 at 2484.497 kb on - strand, within MPMX26_02401 at 2484.519 kb on - strand, within MPMX26_02401 at 2484.692 kb on + strand at 2484.697 kb on + strand at 2484.700 kb on + strand at 2484.743 kb on + strand at 2484.757 kb on + strand at 2484.757 kb on + strand at 2484.798 kb on + strand at 2484.798 kb on + strand at 2484.798 kb on + strand at 2484.798 kb on + strand at 2485.069 kb on + strand at 2485.117 kb on + strand at 2485.117 kb on + strand at 2485.276 kb on + strand, within MPMX26_02402 at 2485.276 kb on + strand, within MPMX26_02402 at 2485.329 kb on + strand, within MPMX26_02402 at 2485.465 kb on + strand, within MPMX26_02402 at 2485.575 kb on + strand, within MPMX26_02402
Per-strain Table
Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds remove 2,483,145 + +0.3 2,483,170 + -0.1 2,483,357 - MPMX26_02400 0.17 -0.1 2,483,357 - MPMX26_02400 0.17 -0.4 2,483,369 - MPMX26_02400 0.18 +0.6 2,483,445 - MPMX26_02400 0.27 +0.0 2,483,447 - MPMX26_02400 0.27 -0.2 2,483,447 - MPMX26_02400 0.27 +0.3 2,483,447 - MPMX26_02400 0.27 +0.1 2,483,447 - MPMX26_02400 0.27 +0.8 2,483,447 - MPMX26_02400 0.27 +0.1 2,483,447 - MPMX26_02400 0.27 +0.4 2,483,619 - MPMX26_02400 0.46 +1.4 2,483,696 - MPMX26_02400 0.54 -0.7 2,483,708 - MPMX26_02400 0.55 +0.3 2,483,784 - MPMX26_02400 0.64 +0.7 2,483,792 - MPMX26_02400 0.64 -0.8 2,483,803 - MPMX26_02400 0.66 +0.3 2,483,813 - MPMX26_02400 0.67 +0.3 2,483,813 - MPMX26_02400 0.67 -0.1 2,483,909 - MPMX26_02400 0.77 +0.2 2,484,095 - -0.2 2,484,171 - -0.7 2,484,171 - -0.1 2,484,228 - MPMX26_02401 0.20 -1.1 2,484,412 - MPMX26_02401 0.61 +0.9 2,484,425 - MPMX26_02401 0.64 -1.2 2,484,425 - MPMX26_02401 0.64 -1.7 2,484,425 - MPMX26_02401 0.64 -0.9 2,484,425 - MPMX26_02401 0.64 -1.7 2,484,443 - MPMX26_02401 0.68 -1.0 2,484,497 - MPMX26_02401 0.79 -1.7 2,484,519 - MPMX26_02401 0.84 -2.7 2,484,692 + +0.4 2,484,697 + +0.2 2,484,700 + -0.3 2,484,743 + +0.5 2,484,757 + +0.5 2,484,757 + +0.1 2,484,798 + -0.5 2,484,798 + +0.0 2,484,798 + +0.0 2,484,798 + -0.0 2,485,069 + +0.2 2,485,117 + -0.4 2,485,117 + -1.2 2,485,276 + MPMX26_02402 0.20 +0.2 2,485,276 + MPMX26_02402 0.20 -2.8 2,485,329 + MPMX26_02402 0.24 +0.9 2,485,465 + MPMX26_02402 0.35 -0.1 2,485,575 + MPMX26_02402 0.43 +0.7
Or see this region's nucleotide sequence