Experiment: UV exposure at 150J/m2 for 20 seconds
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02357 and MPMX26_02358 are separated by 51 nucleotides MPMX26_02358 and MPMX26_02359 are separated by 144 nucleotides MPMX26_02359 and MPMX26_02360 are separated by 158 nucleotides MPMX26_02360 and MPMX26_02361 are separated by 26 nucleotides
MPMX26_02357: MPMX26_02357 - Proline/betaine transporter, at 2,441,609 to 2,442,877
_02357
MPMX26_02358: MPMX26_02358 - hypothetical protein, at 2,442,929 to 2,443,426
_02358
MPMX26_02359: MPMX26_02359 - hypothetical protein, at 2,443,571 to 2,443,858
_02359
MPMX26_02360: MPMX26_02360 - hypothetical protein, at 2,444,017 to 2,444,481
_02360
MPMX26_02361: MPMX26_02361 - hypothetical protein, at 2,444,508 to 2,445,080
_02361
Position (kb)
2443
2444 Strain fitness (log2 ratio)
-2
-1
0
1 at 2442.648 kb on - strand, within MPMX26_02357 at 2442.782 kb on + strand at 2443.185 kb on - strand, within MPMX26_02358 at 2443.234 kb on - strand, within MPMX26_02358 at 2443.631 kb on - strand, within MPMX26_02359 at 2443.695 kb on - strand, within MPMX26_02359 at 2443.717 kb on - strand, within MPMX26_02359 at 2444.029 kb on + strand at 2444.029 kb on + strand at 2444.069 kb on + strand, within MPMX26_02360 at 2444.069 kb on + strand, within MPMX26_02360 at 2444.069 kb on + strand, within MPMX26_02360 at 2444.092 kb on + strand, within MPMX26_02360 at 2444.092 kb on + strand, within MPMX26_02360 at 2444.109 kb on + strand, within MPMX26_02360 at 2444.146 kb on + strand, within MPMX26_02360 at 2444.146 kb on + strand, within MPMX26_02360 at 2444.151 kb on + strand, within MPMX26_02360 at 2444.174 kb on + strand, within MPMX26_02360 at 2444.207 kb on + strand, within MPMX26_02360 at 2444.212 kb on + strand, within MPMX26_02360 at 2444.212 kb on + strand, within MPMX26_02360 at 2444.212 kb on + strand, within MPMX26_02360 at 2444.214 kb on + strand, within MPMX26_02360 at 2444.227 kb on + strand, within MPMX26_02360 at 2444.234 kb on + strand, within MPMX26_02360 at 2444.234 kb on + strand, within MPMX26_02360 at 2444.234 kb on + strand, within MPMX26_02360 at 2444.235 kb on + strand, within MPMX26_02360 at 2444.235 kb on - strand, within MPMX26_02360 at 2444.236 kb on - strand, within MPMX26_02360 at 2444.266 kb on - strand, within MPMX26_02360 at 2444.268 kb on + strand, within MPMX26_02360 at 2444.299 kb on + strand, within MPMX26_02360 at 2444.304 kb on + strand, within MPMX26_02360 at 2444.304 kb on + strand, within MPMX26_02360 at 2444.304 kb on + strand, within MPMX26_02360 at 2444.304 kb on + strand, within MPMX26_02360 at 2444.304 kb on + strand, within MPMX26_02360 at 2444.304 kb on + strand, within MPMX26_02360 at 2444.304 kb on + strand, within MPMX26_02360 at 2444.304 kb on + strand, within MPMX26_02360 at 2444.304 kb on + strand, within MPMX26_02360 at 2444.312 kb on - strand, within MPMX26_02360 at 2444.336 kb on + strand, within MPMX26_02360 at 2444.418 kb on + strand, within MPMX26_02360 at 2444.423 kb on + strand, within MPMX26_02360 at 2444.433 kb on + strand, within MPMX26_02360 at 2444.433 kb on + strand, within MPMX26_02360 at 2444.433 kb on + strand, within MPMX26_02360 at 2444.433 kb on + strand, within MPMX26_02360 at 2444.433 kb on + strand, within MPMX26_02360 at 2444.433 kb on + strand, within MPMX26_02360 at 2444.433 kb on + strand, within MPMX26_02360 at 2444.433 kb on + strand, within MPMX26_02360 at 2444.433 kb on + strand, within MPMX26_02360 at 2444.433 kb on + strand, within MPMX26_02360 at 2444.433 kb on + strand, within MPMX26_02360 at 2444.436 kb on - strand at 2444.441 kb on - strand at 2444.441 kb on - strand at 2444.441 kb on - strand at 2444.441 kb on - strand at 2444.441 kb on - strand at 2444.441 kb on - strand at 2444.441 kb on - strand at 2444.441 kb on - strand at 2444.441 kb on - strand at 2444.441 kb on - strand at 2444.441 kb on - strand at 2444.441 kb on - strand at 2444.468 kb on - strand at 2444.594 kb on - strand, within MPMX26_02361 at 2444.795 kb on - strand, within MPMX26_02361 at 2444.810 kb on - strand, within MPMX26_02361 at 2444.826 kb on - strand, within MPMX26_02361 at 2444.834 kb on - strand, within MPMX26_02361
Per-strain Table
Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds remove 2,442,648 - MPMX26_02357 0.82 +0.2 2,442,782 + -1.1 2,443,185 - MPMX26_02358 0.51 -1.8 2,443,234 - MPMX26_02358 0.61 -0.3 2,443,631 - MPMX26_02359 0.21 -2.6 2,443,695 - MPMX26_02359 0.43 -0.1 2,443,717 - MPMX26_02359 0.51 -0.0 2,444,029 + +0.2 2,444,029 + -0.4 2,444,069 + MPMX26_02360 0.11 -0.4 2,444,069 + MPMX26_02360 0.11 -0.1 2,444,069 + MPMX26_02360 0.11 +0.4 2,444,092 + MPMX26_02360 0.16 +0.2 2,444,092 + MPMX26_02360 0.16 -1.3 2,444,109 + MPMX26_02360 0.20 -0.2 2,444,146 + MPMX26_02360 0.28 +0.3 2,444,146 + MPMX26_02360 0.28 +0.1 2,444,151 + MPMX26_02360 0.29 +0.5 2,444,174 + MPMX26_02360 0.34 -0.3 2,444,207 + MPMX26_02360 0.41 -0.8 2,444,212 + MPMX26_02360 0.42 +0.8 2,444,212 + MPMX26_02360 0.42 -0.1 2,444,212 + MPMX26_02360 0.42 -1.1 2,444,214 + MPMX26_02360 0.42 -0.2 2,444,227 + MPMX26_02360 0.45 -0.9 2,444,234 + MPMX26_02360 0.47 +0.1 2,444,234 + MPMX26_02360 0.47 -0.9 2,444,234 + MPMX26_02360 0.47 -0.2 2,444,235 + MPMX26_02360 0.47 -0.6 2,444,235 - MPMX26_02360 0.47 -1.3 2,444,236 - MPMX26_02360 0.47 +0.2 2,444,266 - MPMX26_02360 0.54 +0.6 2,444,268 + MPMX26_02360 0.54 -0.3 2,444,299 + MPMX26_02360 0.61 +0.2 2,444,304 + MPMX26_02360 0.62 +0.5 2,444,304 + MPMX26_02360 0.62 -0.2 2,444,304 + MPMX26_02360 0.62 +0.2 2,444,304 + MPMX26_02360 0.62 -0.9 2,444,304 + MPMX26_02360 0.62 +0.1 2,444,304 + MPMX26_02360 0.62 +0.1 2,444,304 + MPMX26_02360 0.62 -0.3 2,444,304 + MPMX26_02360 0.62 -0.7 2,444,304 + MPMX26_02360 0.62 -0.3 2,444,312 - MPMX26_02360 0.63 +0.2 2,444,336 + MPMX26_02360 0.69 +0.3 2,444,418 + MPMX26_02360 0.86 -1.0 2,444,423 + MPMX26_02360 0.87 +0.4 2,444,433 + MPMX26_02360 0.89 +0.6 2,444,433 + MPMX26_02360 0.89 -0.1 2,444,433 + MPMX26_02360 0.89 -0.1 2,444,433 + MPMX26_02360 0.89 +0.4 2,444,433 + MPMX26_02360 0.89 -0.5 2,444,433 + MPMX26_02360 0.89 +0.3 2,444,433 + MPMX26_02360 0.89 -1.5 2,444,433 + MPMX26_02360 0.89 +0.2 2,444,433 + MPMX26_02360 0.89 +0.9 2,444,433 + MPMX26_02360 0.89 +1.0 2,444,433 + MPMX26_02360 0.89 +0.9 2,444,436 - -1.2 2,444,441 - -1.1 2,444,441 - +0.3 2,444,441 - -1.1 2,444,441 - -0.1 2,444,441 - +0.4 2,444,441 - -0.4 2,444,441 - -1.0 2,444,441 - -0.0 2,444,441 - -0.6 2,444,441 - -0.2 2,444,441 - +0.8 2,444,441 - -0.9 2,444,468 - -0.8 2,444,594 - MPMX26_02361 0.15 +0.5 2,444,795 - MPMX26_02361 0.50 -0.6 2,444,810 - MPMX26_02361 0.53 +0.0 2,444,826 - MPMX26_02361 0.55 -0.4 2,444,834 - MPMX26_02361 0.57 +0.4
Or see this region's nucleotide sequence