Experiment: UV exposure at 150J/m2 for 20 seconds
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02354 and MPMX26_02355 are separated by 47 nucleotides MPMX26_02355 and MPMX26_02356 are separated by 159 nucleotides
MPMX26_02354: MPMX26_02354 - Fosfomycin resistance protein AbaF, at 2,436,819 to 2,438,207
_02354
MPMX26_02355: MPMX26_02355 - Carnitine monooxygenase reductase subunit, at 2,438,255 to 2,440,531
_02355
MPMX26_02356: MPMX26_02356 - hypothetical protein, at 2,440,691 to 2,441,332
_02356
Position (kb)
2438
2439
2440
2441 Strain fitness (log2 ratio)
-1
0
1
2 at 2437.868 kb on + strand, within MPMX26_02354 at 2437.868 kb on + strand, within MPMX26_02354 at 2438.410 kb on + strand at 2439.070 kb on - strand, within MPMX26_02355 at 2439.361 kb on - strand, within MPMX26_02355 at 2439.421 kb on - strand, within MPMX26_02355 at 2439.634 kb on - strand, within MPMX26_02355 at 2440.748 kb on + strand at 2440.748 kb on + strand at 2440.784 kb on + strand, within MPMX26_02356 at 2440.803 kb on + strand, within MPMX26_02356 at 2440.815 kb on + strand, within MPMX26_02356 at 2440.827 kb on + strand, within MPMX26_02356 at 2440.943 kb on + strand, within MPMX26_02356 at 2440.943 kb on + strand, within MPMX26_02356 at 2440.972 kb on + strand, within MPMX26_02356 at 2441.000 kb on + strand, within MPMX26_02356 at 2441.000 kb on + strand, within MPMX26_02356 at 2441.000 kb on + strand, within MPMX26_02356 at 2441.000 kb on + strand, within MPMX26_02356 at 2441.000 kb on + strand, within MPMX26_02356 at 2441.010 kb on + strand, within MPMX26_02356 at 2441.010 kb on + strand, within MPMX26_02356 at 2441.010 kb on + strand, within MPMX26_02356 at 2441.017 kb on + strand, within MPMX26_02356 at 2441.017 kb on + strand, within MPMX26_02356 at 2441.017 kb on + strand, within MPMX26_02356 at 2441.152 kb on + strand, within MPMX26_02356 at 2441.216 kb on + strand, within MPMX26_02356 at 2441.221 kb on + strand, within MPMX26_02356 at 2441.242 kb on + strand, within MPMX26_02356
Per-strain Table
Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds remove 2,437,868 + MPMX26_02354 0.76 -0.2 2,437,868 + MPMX26_02354 0.76 -0.1 2,438,410 + +0.1 2,439,070 - MPMX26_02355 0.36 -1.3 2,439,361 - MPMX26_02355 0.49 -0.1 2,439,421 - MPMX26_02355 0.51 -0.2 2,439,634 - MPMX26_02355 0.61 -0.9 2,440,748 + +0.3 2,440,748 + +0.1 2,440,784 + MPMX26_02356 0.14 +0.2 2,440,803 + MPMX26_02356 0.17 +2.1 2,440,815 + MPMX26_02356 0.19 -0.5 2,440,827 + MPMX26_02356 0.21 +0.9 2,440,943 + MPMX26_02356 0.39 +0.5 2,440,943 + MPMX26_02356 0.39 -0.0 2,440,972 + MPMX26_02356 0.44 -0.0 2,441,000 + MPMX26_02356 0.48 +0.4 2,441,000 + MPMX26_02356 0.48 -0.0 2,441,000 + MPMX26_02356 0.48 +0.4 2,441,000 + MPMX26_02356 0.48 -0.1 2,441,000 + MPMX26_02356 0.48 -0.0 2,441,010 + MPMX26_02356 0.50 +0.1 2,441,010 + MPMX26_02356 0.50 +0.7 2,441,010 + MPMX26_02356 0.50 -0.7 2,441,017 + MPMX26_02356 0.51 -0.2 2,441,017 + MPMX26_02356 0.51 -0.2 2,441,017 + MPMX26_02356 0.51 -0.4 2,441,152 + MPMX26_02356 0.72 -0.8 2,441,216 + MPMX26_02356 0.82 +0.5 2,441,221 + MPMX26_02356 0.83 +0.5 2,441,242 + MPMX26_02356 0.86 -0.1
Or see this region's nucleotide sequence