Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02355

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02354 and MPMX26_02355 are separated by 47 nucleotidesMPMX26_02355 and MPMX26_02356 are separated by 159 nucleotides MPMX26_02354: MPMX26_02354 - Fosfomycin resistance protein AbaF, at 2,436,819 to 2,438,207 _02354 MPMX26_02355: MPMX26_02355 - Carnitine monooxygenase reductase subunit, at 2,438,255 to 2,440,531 _02355 MPMX26_02356: MPMX26_02356 - hypothetical protein, at 2,440,691 to 2,441,332 _02356 Position (kb) 2438 2439 2440 2441Strain fitness (log2 ratio) -1 0 1 2at 2437.868 kb on + strand, within MPMX26_02354at 2437.868 kb on + strand, within MPMX26_02354at 2438.410 kb on + strandat 2439.070 kb on - strand, within MPMX26_02355at 2439.361 kb on - strand, within MPMX26_02355at 2439.421 kb on - strand, within MPMX26_02355at 2439.634 kb on - strand, within MPMX26_02355at 2440.748 kb on + strandat 2440.748 kb on + strandat 2440.784 kb on + strand, within MPMX26_02356at 2440.803 kb on + strand, within MPMX26_02356at 2440.815 kb on + strand, within MPMX26_02356at 2440.827 kb on + strand, within MPMX26_02356at 2440.943 kb on + strand, within MPMX26_02356at 2440.943 kb on + strand, within MPMX26_02356at 2440.972 kb on + strand, within MPMX26_02356at 2441.000 kb on + strand, within MPMX26_02356at 2441.000 kb on + strand, within MPMX26_02356at 2441.000 kb on + strand, within MPMX26_02356at 2441.000 kb on + strand, within MPMX26_02356at 2441.000 kb on + strand, within MPMX26_02356at 2441.010 kb on + strand, within MPMX26_02356at 2441.010 kb on + strand, within MPMX26_02356at 2441.010 kb on + strand, within MPMX26_02356at 2441.017 kb on + strand, within MPMX26_02356at 2441.017 kb on + strand, within MPMX26_02356at 2441.017 kb on + strand, within MPMX26_02356at 2441.152 kb on + strand, within MPMX26_02356at 2441.216 kb on + strand, within MPMX26_02356at 2441.221 kb on + strand, within MPMX26_02356at 2441.242 kb on + strand, within MPMX26_02356

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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2,437,868 + MPMX26_02354 0.76 -0.2
2,437,868 + MPMX26_02354 0.76 -0.1
2,438,410 + +0.1
2,439,070 - MPMX26_02355 0.36 -1.3
2,439,361 - MPMX26_02355 0.49 -0.1
2,439,421 - MPMX26_02355 0.51 -0.2
2,439,634 - MPMX26_02355 0.61 -0.9
2,440,748 + +0.3
2,440,748 + +0.1
2,440,784 + MPMX26_02356 0.14 +0.2
2,440,803 + MPMX26_02356 0.17 +2.1
2,440,815 + MPMX26_02356 0.19 -0.5
2,440,827 + MPMX26_02356 0.21 +0.9
2,440,943 + MPMX26_02356 0.39 +0.5
2,440,943 + MPMX26_02356 0.39 -0.0
2,440,972 + MPMX26_02356 0.44 -0.0
2,441,000 + MPMX26_02356 0.48 +0.4
2,441,000 + MPMX26_02356 0.48 -0.0
2,441,000 + MPMX26_02356 0.48 +0.4
2,441,000 + MPMX26_02356 0.48 -0.1
2,441,000 + MPMX26_02356 0.48 -0.0
2,441,010 + MPMX26_02356 0.50 +0.1
2,441,010 + MPMX26_02356 0.50 +0.7
2,441,010 + MPMX26_02356 0.50 -0.7
2,441,017 + MPMX26_02356 0.51 -0.2
2,441,017 + MPMX26_02356 0.51 -0.2
2,441,017 + MPMX26_02356 0.51 -0.4
2,441,152 + MPMX26_02356 0.72 -0.8
2,441,216 + MPMX26_02356 0.82 +0.5
2,441,221 + MPMX26_02356 0.83 +0.5
2,441,242 + MPMX26_02356 0.86 -0.1

Or see this region's nucleotide sequence