Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02206

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02205 and MPMX26_02206 are separated by 137 nucleotidesMPMX26_02206 and MPMX26_02207 are separated by 6 nucleotidesMPMX26_02207 and MPMX26_02208 are separated by 61 nucleotides MPMX26_02205: MPMX26_02205 - hypothetical protein, at 2,261,183 to 2,262,370 _02205 MPMX26_02206: MPMX26_02206 - Phosphoribosylformylglycinamidine cyclo-ligase, at 2,262,508 to 2,263,578 _02206 MPMX26_02207: MPMX26_02207 - Phosphoribosylglycinamide formyltransferase, at 2,263,585 to 2,264,217 _02207 MPMX26_02208: MPMX26_02208 - hypothetical protein, at 2,264,279 to 2,265,076 _02208 Position (kb) 2262 2263 2264Strain fitness (log2 ratio) -2 -1 0 1 2at 2261.558 kb on - strand, within MPMX26_02205at 2261.558 kb on - strand, within MPMX26_02205at 2261.558 kb on - strand, within MPMX26_02205at 2261.558 kb on - strand, within MPMX26_02205at 2261.558 kb on - strand, within MPMX26_02205at 2261.558 kb on - strand, within MPMX26_02205at 2261.691 kb on - strand, within MPMX26_02205at 2261.758 kb on - strand, within MPMX26_02205at 2261.759 kb on - strand, within MPMX26_02205at 2261.765 kb on - strand, within MPMX26_02205at 2261.828 kb on - strand, within MPMX26_02205at 2261.831 kb on - strand, within MPMX26_02205at 2261.854 kb on - strand, within MPMX26_02205at 2261.926 kb on - strand, within MPMX26_02205at 2261.977 kb on - strand, within MPMX26_02205at 2262.002 kb on - strand, within MPMX26_02205at 2262.085 kb on - strand, within MPMX26_02205at 2262.085 kb on - strand, within MPMX26_02205at 2262.085 kb on - strand, within MPMX26_02205at 2262.085 kb on - strand, within MPMX26_02205at 2262.096 kb on - strand, within MPMX26_02205at 2262.227 kb on - strand, within MPMX26_02205at 2262.232 kb on - strand, within MPMX26_02205at 2262.248 kb on - strand, within MPMX26_02205at 2262.268 kb on - strandat 2262.293 kb on - strandat 2262.308 kb on - strandat 2262.364 kb on - strandat 2262.472 kb on + strandat 2262.538 kb on + strandat 2262.538 kb on + strandat 2262.559 kb on + strandat 2262.597 kb on + strandat 2262.597 kb on + strandat 2262.597 kb on + strandat 2262.620 kb on + strand, within MPMX26_02206at 2262.626 kb on + strand, within MPMX26_02206at 2262.715 kb on + strand, within MPMX26_02206at 2262.758 kb on + strand, within MPMX26_02206at 2262.767 kb on + strand, within MPMX26_02206at 2262.772 kb on + strand, within MPMX26_02206at 2262.772 kb on + strand, within MPMX26_02206at 2262.772 kb on + strand, within MPMX26_02206at 2262.772 kb on + strand, within MPMX26_02206at 2262.772 kb on + strand, within MPMX26_02206at 2262.772 kb on + strand, within MPMX26_02206at 2262.772 kb on + strand, within MPMX26_02206at 2262.772 kb on + strand, within MPMX26_02206at 2262.772 kb on + strand, within MPMX26_02206at 2262.772 kb on + strand, within MPMX26_02206at 2262.772 kb on + strand, within MPMX26_02206at 2262.803 kb on + strand, within MPMX26_02206at 2262.808 kb on + strand, within MPMX26_02206at 2262.810 kb on + strand, within MPMX26_02206at 2262.813 kb on + strand, within MPMX26_02206at 2262.813 kb on + strand, within MPMX26_02206at 2262.813 kb on + strand, within MPMX26_02206at 2262.818 kb on + strand, within MPMX26_02206at 2262.818 kb on + strand, within MPMX26_02206at 2262.818 kb on + strand, within MPMX26_02206at 2262.818 kb on + strand, within MPMX26_02206at 2262.818 kb on + strand, within MPMX26_02206at 2262.818 kb on + strand, within MPMX26_02206at 2262.826 kb on + strand, within MPMX26_02206at 2262.831 kb on + strand, within MPMX26_02206at 2262.836 kb on + strand, within MPMX26_02206at 2262.843 kb on + strand, within MPMX26_02206at 2262.843 kb on + strand, within MPMX26_02206at 2262.860 kb on + strand, within MPMX26_02206at 2262.939 kb on + strand, within MPMX26_02206at 2262.966 kb on + strand, within MPMX26_02206at 2262.966 kb on + strand, within MPMX26_02206at 2263.006 kb on + strand, within MPMX26_02206at 2263.006 kb on + strand, within MPMX26_02206at 2263.007 kb on + strand, within MPMX26_02206at 2263.055 kb on + strand, within MPMX26_02206at 2263.065 kb on + strand, within MPMX26_02206at 2263.084 kb on + strand, within MPMX26_02206at 2263.084 kb on + strand, within MPMX26_02206at 2263.092 kb on + strand, within MPMX26_02206at 2263.092 kb on + strand, within MPMX26_02206at 2263.092 kb on + strand, within MPMX26_02206at 2263.098 kb on + strand, within MPMX26_02206at 2263.103 kb on + strand, within MPMX26_02206at 2263.171 kb on + strand, within MPMX26_02206at 2263.171 kb on + strand, within MPMX26_02206at 2263.171 kb on + strand, within MPMX26_02206at 2263.181 kb on + strand, within MPMX26_02206at 2263.200 kb on + strand, within MPMX26_02206at 2263.250 kb on + strand, within MPMX26_02206at 2263.250 kb on + strand, within MPMX26_02206at 2263.250 kb on + strand, within MPMX26_02206at 2263.260 kb on + strand, within MPMX26_02206at 2263.260 kb on + strand, within MPMX26_02206at 2263.260 kb on + strand, within MPMX26_02206at 2263.260 kb on + strand, within MPMX26_02206at 2263.260 kb on + strand, within MPMX26_02206at 2263.260 kb on + strand, within MPMX26_02206at 2263.260 kb on + strand, within MPMX26_02206at 2263.260 kb on + strand, within MPMX26_02206at 2263.260 kb on + strand, within MPMX26_02206at 2263.260 kb on + strand, within MPMX26_02206at 2263.260 kb on + strand, within MPMX26_02206at 2263.260 kb on + strand, within MPMX26_02206at 2263.300 kb on + strand, within MPMX26_02206at 2263.300 kb on + strand, within MPMX26_02206at 2263.302 kb on + strand, within MPMX26_02206at 2263.382 kb on + strand, within MPMX26_02206at 2263.382 kb on + strand, within MPMX26_02206at 2263.409 kb on + strand, within MPMX26_02206at 2263.426 kb on + strand, within MPMX26_02206at 2263.427 kb on + strand, within MPMX26_02206at 2263.431 kb on + strand, within MPMX26_02206at 2263.431 kb on + strand, within MPMX26_02206at 2263.453 kb on + strand, within MPMX26_02206at 2263.479 kb on + strandat 2263.479 kb on + strandat 2263.502 kb on + strandat 2263.509 kb on + strandat 2263.509 kb on + strandat 2263.597 kb on + strandat 2263.632 kb on + strandat 2263.633 kb on + strandat 2263.666 kb on + strand, within MPMX26_02207at 2263.672 kb on + strand, within MPMX26_02207at 2263.672 kb on + strand, within MPMX26_02207at 2263.677 kb on + strand, within MPMX26_02207at 2263.686 kb on + strand, within MPMX26_02207at 2263.699 kb on + strand, within MPMX26_02207at 2263.709 kb on + strand, within MPMX26_02207at 2263.725 kb on + strand, within MPMX26_02207at 2263.725 kb on + strand, within MPMX26_02207at 2263.725 kb on + strand, within MPMX26_02207at 2263.781 kb on + strand, within MPMX26_02207at 2263.798 kb on + strand, within MPMX26_02207at 2263.880 kb on + strand, within MPMX26_02207at 2263.892 kb on + strand, within MPMX26_02207at 2263.899 kb on + strand, within MPMX26_02207at 2263.917 kb on + strand, within MPMX26_02207at 2263.924 kb on + strand, within MPMX26_02207at 2263.924 kb on + strand, within MPMX26_02207at 2263.925 kb on + strand, within MPMX26_02207at 2263.973 kb on + strand, within MPMX26_02207at 2263.973 kb on + strand, within MPMX26_02207at 2263.973 kb on + strand, within MPMX26_02207at 2263.999 kb on + strand, within MPMX26_02207at 2264.059 kb on + strand, within MPMX26_02207at 2264.059 kb on + strand, within MPMX26_02207at 2264.059 kb on + strand, within MPMX26_02207at 2264.059 kb on + strand, within MPMX26_02207at 2264.059 kb on + strand, within MPMX26_02207at 2264.059 kb on + strand, within MPMX26_02207at 2264.075 kb on + strand, within MPMX26_02207at 2264.078 kb on + strand, within MPMX26_02207at 2264.078 kb on + strand, within MPMX26_02207at 2264.080 kb on + strand, within MPMX26_02207at 2264.087 kb on + strand, within MPMX26_02207at 2264.100 kb on + strand, within MPMX26_02207at 2264.100 kb on + strand, within MPMX26_02207at 2264.105 kb on + strand, within MPMX26_02207at 2264.105 kb on + strand, within MPMX26_02207at 2264.105 kb on + strand, within MPMX26_02207at 2264.124 kb on + strand, within MPMX26_02207at 2264.124 kb on + strand, within MPMX26_02207at 2264.124 kb on + strand, within MPMX26_02207at 2264.124 kb on + strand, within MPMX26_02207at 2264.124 kb on + strand, within MPMX26_02207at 2264.124 kb on + strand, within MPMX26_02207at 2264.124 kb on + strand, within MPMX26_02207at 2264.135 kb on + strand, within MPMX26_02207at 2264.140 kb on + strand, within MPMX26_02207at 2264.145 kb on + strand, within MPMX26_02207at 2264.145 kb on + strand, within MPMX26_02207at 2264.147 kb on + strand, within MPMX26_02207at 2264.159 kb on + strandat 2264.159 kb on + strandat 2264.159 kb on + strandat 2264.159 kb on + strandat 2264.187 kb on + strandat 2264.187 kb on + strandat 2264.197 kb on + strandat 2264.322 kb on - strandat 2264.442 kb on - strand, within MPMX26_02208at 2264.482 kb on - strand, within MPMX26_02208at 2264.533 kb on - strand, within MPMX26_02208at 2264.536 kb on - strand, within MPMX26_02208at 2264.536 kb on - strand, within MPMX26_02208at 2264.536 kb on - strand, within MPMX26_02208

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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2,261,558 - MPMX26_02205 0.32 -0.1
2,261,558 - MPMX26_02205 0.32 -0.1
2,261,558 - MPMX26_02205 0.32 -0.2
2,261,558 - MPMX26_02205 0.32 +0.6
2,261,558 - MPMX26_02205 0.32 +1.7
2,261,558 - MPMX26_02205 0.32 +0.1
2,261,691 - MPMX26_02205 0.43 -1.3
2,261,758 - MPMX26_02205 0.48 +0.2
2,261,759 - MPMX26_02205 0.48 -0.0
2,261,765 - MPMX26_02205 0.49 -0.4
2,261,828 - MPMX26_02205 0.54 -0.0
2,261,831 - MPMX26_02205 0.55 -0.9
2,261,854 - MPMX26_02205 0.56 -0.6
2,261,926 - MPMX26_02205 0.63 +0.7
2,261,977 - MPMX26_02205 0.67 -0.4
2,262,002 - MPMX26_02205 0.69 -0.3
2,262,085 - MPMX26_02205 0.76 +0.4
2,262,085 - MPMX26_02205 0.76 -0.5
2,262,085 - MPMX26_02205 0.76 +0.1
2,262,085 - MPMX26_02205 0.76 -0.5
2,262,096 - MPMX26_02205 0.77 -1.6
2,262,227 - MPMX26_02205 0.88 -0.8
2,262,232 - MPMX26_02205 0.88 +0.3
2,262,248 - MPMX26_02205 0.90 -0.4
2,262,268 - -0.2
2,262,293 - -0.0
2,262,308 - +0.3
2,262,364 - -0.7
2,262,472 + -0.3
2,262,538 + -1.5
2,262,538 + -0.8
2,262,559 + -0.1
2,262,597 + +0.9
2,262,597 + -2.2
2,262,597 + -1.5
2,262,620 + MPMX26_02206 0.10 +0.3
2,262,626 + MPMX26_02206 0.11 -0.8
2,262,715 + MPMX26_02206 0.19 -1.6
2,262,758 + MPMX26_02206 0.23 -0.9
2,262,767 + MPMX26_02206 0.24 -1.1
2,262,772 + MPMX26_02206 0.25 -0.5
2,262,772 + MPMX26_02206 0.25 -0.3
2,262,772 + MPMX26_02206 0.25 -1.8
2,262,772 + MPMX26_02206 0.25 -1.2
2,262,772 + MPMX26_02206 0.25 -0.6
2,262,772 + MPMX26_02206 0.25 -0.9
2,262,772 + MPMX26_02206 0.25 +0.1
2,262,772 + MPMX26_02206 0.25 -0.3
2,262,772 + MPMX26_02206 0.25 -1.5
2,262,772 + MPMX26_02206 0.25 -1.5
2,262,772 + MPMX26_02206 0.25 -1.1
2,262,803 + MPMX26_02206 0.28 -0.3
2,262,808 + MPMX26_02206 0.28 -0.2
2,262,810 + MPMX26_02206 0.28 -1.5
2,262,813 + MPMX26_02206 0.28 -1.5
2,262,813 + MPMX26_02206 0.28 -2.3
2,262,813 + MPMX26_02206 0.28 -0.3
2,262,818 + MPMX26_02206 0.29 -2.4
2,262,818 + MPMX26_02206 0.29 -0.1
2,262,818 + MPMX26_02206 0.29 -0.1
2,262,818 + MPMX26_02206 0.29 -1.1
2,262,818 + MPMX26_02206 0.29 -0.8
2,262,818 + MPMX26_02206 0.29 -0.9
2,262,826 + MPMX26_02206 0.30 -0.2
2,262,831 + MPMX26_02206 0.30 -1.3
2,262,836 + MPMX26_02206 0.31 +0.1
2,262,843 + MPMX26_02206 0.31 +1.1
2,262,843 + MPMX26_02206 0.31 +0.5
2,262,860 + MPMX26_02206 0.33 -1.6
2,262,939 + MPMX26_02206 0.40 -2.2
2,262,966 + MPMX26_02206 0.43 -1.3
2,262,966 + MPMX26_02206 0.43 -1.7
2,263,006 + MPMX26_02206 0.46 -1.6
2,263,006 + MPMX26_02206 0.46 -1.3
2,263,007 + MPMX26_02206 0.47 -0.4
2,263,055 + MPMX26_02206 0.51 -1.3
2,263,065 + MPMX26_02206 0.52 +0.4
2,263,084 + MPMX26_02206 0.54 -1.5
2,263,084 + MPMX26_02206 0.54 -2.0
2,263,092 + MPMX26_02206 0.55 -0.6
2,263,092 + MPMX26_02206 0.55 -1.8
2,263,092 + MPMX26_02206 0.55 -1.6
2,263,098 + MPMX26_02206 0.55 +0.7
2,263,103 + MPMX26_02206 0.56 +1.1
2,263,171 + MPMX26_02206 0.62 -0.5
2,263,171 + MPMX26_02206 0.62 -0.2
2,263,171 + MPMX26_02206 0.62 -0.7
2,263,181 + MPMX26_02206 0.63 -0.6
2,263,200 + MPMX26_02206 0.65 +0.9
2,263,250 + MPMX26_02206 0.69 +0.7
2,263,250 + MPMX26_02206 0.69 +0.3
2,263,250 + MPMX26_02206 0.69 -1.5
2,263,260 + MPMX26_02206 0.70 -1.8
2,263,260 + MPMX26_02206 0.70 -0.5
2,263,260 + MPMX26_02206 0.70 -1.2
2,263,260 + MPMX26_02206 0.70 -1.7
2,263,260 + MPMX26_02206 0.70 -0.1
2,263,260 + MPMX26_02206 0.70 +0.2
2,263,260 + MPMX26_02206 0.70 -0.1
2,263,260 + MPMX26_02206 0.70 -0.9
2,263,260 + MPMX26_02206 0.70 -1.1
2,263,260 + MPMX26_02206 0.70 +0.1
2,263,260 + MPMX26_02206 0.70 +0.4
2,263,260 + MPMX26_02206 0.70 -1.1
2,263,300 + MPMX26_02206 0.74 -1.1
2,263,300 + MPMX26_02206 0.74 -2.0
2,263,302 + MPMX26_02206 0.74 +0.7
2,263,382 + MPMX26_02206 0.82 -0.5
2,263,382 + MPMX26_02206 0.82 -0.8
2,263,409 + MPMX26_02206 0.84 -1.6
2,263,426 + MPMX26_02206 0.86 -0.6
2,263,427 + MPMX26_02206 0.86 -1.3
2,263,431 + MPMX26_02206 0.86 -1.9
2,263,431 + MPMX26_02206 0.86 -0.8
2,263,453 + MPMX26_02206 0.88 -0.3
2,263,479 + -1.6
2,263,479 + -1.3
2,263,502 + -1.5
2,263,509 + +1.4
2,263,509 + -1.1
2,263,597 + -0.4
2,263,632 + +0.1
2,263,633 + -0.2
2,263,666 + MPMX26_02207 0.13 +0.1
2,263,672 + MPMX26_02207 0.14 +0.7
2,263,672 + MPMX26_02207 0.14 -0.8
2,263,677 + MPMX26_02207 0.15 -0.4
2,263,686 + MPMX26_02207 0.16 +0.3
2,263,699 + MPMX26_02207 0.18 -0.6
2,263,709 + MPMX26_02207 0.20 -0.3
2,263,725 + MPMX26_02207 0.22 +0.3
2,263,725 + MPMX26_02207 0.22 -0.5
2,263,725 + MPMX26_02207 0.22 +0.2
2,263,781 + MPMX26_02207 0.31 -0.2
2,263,798 + MPMX26_02207 0.34 +1.4
2,263,880 + MPMX26_02207 0.47 -1.1
2,263,892 + MPMX26_02207 0.48 -0.9
2,263,899 + MPMX26_02207 0.50 +0.5
2,263,917 + MPMX26_02207 0.52 -1.0
2,263,924 + MPMX26_02207 0.54 +0.2
2,263,924 + MPMX26_02207 0.54 -0.7
2,263,925 + MPMX26_02207 0.54 -0.0
2,263,973 + MPMX26_02207 0.61 -0.1
2,263,973 + MPMX26_02207 0.61 -0.3
2,263,973 + MPMX26_02207 0.61 +0.2
2,263,999 + MPMX26_02207 0.65 -0.4
2,264,059 + MPMX26_02207 0.75 +0.0
2,264,059 + MPMX26_02207 0.75 -0.2
2,264,059 + MPMX26_02207 0.75 -0.5
2,264,059 + MPMX26_02207 0.75 +2.7
2,264,059 + MPMX26_02207 0.75 -0.8
2,264,059 + MPMX26_02207 0.75 -0.3
2,264,075 + MPMX26_02207 0.77 -0.9
2,264,078 + MPMX26_02207 0.78 -0.3
2,264,078 + MPMX26_02207 0.78 +0.2
2,264,080 + MPMX26_02207 0.78 -0.9
2,264,087 + MPMX26_02207 0.79 +0.3
2,264,100 + MPMX26_02207 0.81 -0.1
2,264,100 + MPMX26_02207 0.81 -0.1
2,264,105 + MPMX26_02207 0.82 -0.9
2,264,105 + MPMX26_02207 0.82 -0.6
2,264,105 + MPMX26_02207 0.82 -0.3
2,264,124 + MPMX26_02207 0.85 -0.6
2,264,124 + MPMX26_02207 0.85 +0.1
2,264,124 + MPMX26_02207 0.85 -0.7
2,264,124 + MPMX26_02207 0.85 -0.2
2,264,124 + MPMX26_02207 0.85 -0.3
2,264,124 + MPMX26_02207 0.85 -0.9
2,264,124 + MPMX26_02207 0.85 +0.2
2,264,135 + MPMX26_02207 0.87 -1.1
2,264,140 + MPMX26_02207 0.88 -1.2
2,264,145 + MPMX26_02207 0.88 +1.5
2,264,145 + MPMX26_02207 0.88 -0.5
2,264,147 + MPMX26_02207 0.89 +0.1
2,264,159 + +0.4
2,264,159 + -0.4
2,264,159 + -0.0
2,264,159 + +0.4
2,264,187 + -0.6
2,264,187 + -0.6
2,264,197 + +0.2
2,264,322 - +0.2
2,264,442 - MPMX26_02208 0.20 -0.5
2,264,482 - MPMX26_02208 0.25 -0.1
2,264,533 - MPMX26_02208 0.32 -0.2
2,264,536 - MPMX26_02208 0.32 +0.2
2,264,536 - MPMX26_02208 0.32 +0.7
2,264,536 - MPMX26_02208 0.32 -0.1

Or see this region's nucleotide sequence