Experiment: UV exposure at 150J/m2 for 20 seconds
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02184 and MPMX26_02185 are separated by 20 nucleotides MPMX26_02185 and MPMX26_02186 are separated by 20 nucleotides MPMX26_02186 and MPMX26_02187 are separated by 88 nucleotides
MPMX26_02184: MPMX26_02184 - Deoxyguanosinetriphosphate triphosphohydrolase-like protein, at 2,240,203 to 2,241,534
_02184
MPMX26_02185: MPMX26_02185 - Holliday junction ATP-dependent DNA helicase RuvA, at 2,241,555 to 2,242,157
_02185
MPMX26_02186: MPMX26_02186 - Holliday junction ATP-dependent DNA helicase RuvB, at 2,242,178 to 2,243,182
_02186
MPMX26_02187: MPMX26_02187 - Baeyer-Villiger monooxygenase, at 2,243,271 to 2,244,815
_02187
Position (kb)
2242
2243
2244 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2241.223 kb on + strand, within MPMX26_02184 at 2241.223 kb on + strand, within MPMX26_02184 at 2241.223 kb on + strand, within MPMX26_02184 at 2241.301 kb on + strand, within MPMX26_02184 at 2241.477 kb on + strand at 2241.495 kb on + strand at 2241.496 kb on + strand at 2241.496 kb on + strand at 2241.502 kb on + strand at 2241.502 kb on + strand at 2241.502 kb on + strand at 2241.502 kb on + strand at 2241.502 kb on + strand at 2241.502 kb on + strand at 2241.502 kb on + strand at 2241.633 kb on + strand, within MPMX26_02185 at 2241.704 kb on + strand, within MPMX26_02185 at 2241.719 kb on + strand, within MPMX26_02185 at 2241.740 kb on + strand, within MPMX26_02185 at 2241.740 kb on + strand, within MPMX26_02185 at 2241.846 kb on + strand, within MPMX26_02185 at 2241.867 kb on + strand, within MPMX26_02185 at 2241.867 kb on + strand, within MPMX26_02185 at 2241.867 kb on + strand, within MPMX26_02185 at 2241.869 kb on + strand, within MPMX26_02185 at 2241.900 kb on + strand, within MPMX26_02185 at 2241.944 kb on + strand, within MPMX26_02185 at 2241.974 kb on + strand, within MPMX26_02185 at 2241.984 kb on + strand, within MPMX26_02185 at 2242.013 kb on + strand, within MPMX26_02185 at 2242.038 kb on + strand, within MPMX26_02185 at 2242.038 kb on + strand, within MPMX26_02185 at 2242.038 kb on + strand, within MPMX26_02185 at 2242.270 kb on + strand at 2242.328 kb on + strand, within MPMX26_02186 at 2242.328 kb on + strand, within MPMX26_02186 at 2242.340 kb on + strand, within MPMX26_02186 at 2242.340 kb on + strand, within MPMX26_02186 at 2242.366 kb on + strand, within MPMX26_02186 at 2242.366 kb on + strand, within MPMX26_02186 at 2242.366 kb on + strand, within MPMX26_02186 at 2242.366 kb on + strand, within MPMX26_02186 at 2242.430 kb on + strand, within MPMX26_02186 at 2242.451 kb on + strand, within MPMX26_02186 at 2242.451 kb on + strand, within MPMX26_02186 at 2242.466 kb on + strand, within MPMX26_02186 at 2242.466 kb on + strand, within MPMX26_02186 at 2242.490 kb on + strand, within MPMX26_02186 at 2242.592 kb on + strand, within MPMX26_02186 at 2242.861 kb on + strand, within MPMX26_02186 at 2243.013 kb on + strand, within MPMX26_02186 at 2243.015 kb on + strand, within MPMX26_02186 at 2243.063 kb on + strand, within MPMX26_02186 at 2243.087 kb on + strand at 2243.087 kb on + strand at 2243.092 kb on + strand at 2243.092 kb on + strand at 2243.092 kb on + strand at 2243.092 kb on + strand at 2243.092 kb on + strand at 2243.093 kb on + strand at 2243.131 kb on + strand at 2243.131 kb on + strand at 2243.149 kb on + strand at 2243.158 kb on + strand at 2243.158 kb on + strand at 2243.158 kb on + strand at 2243.158 kb on + strand at 2243.160 kb on + strand at 2243.376 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds remove 2,241,223 + MPMX26_02184 0.77 -0.8 2,241,223 + MPMX26_02184 0.77 -0.5 2,241,223 + MPMX26_02184 0.77 +0.2 2,241,301 + MPMX26_02184 0.82 -0.9 2,241,477 + +0.3 2,241,495 + -1.1 2,241,496 + -0.1 2,241,496 + -0.1 2,241,502 + -0.3 2,241,502 + +0.5 2,241,502 + +0.9 2,241,502 + -0.2 2,241,502 + -0.3 2,241,502 + -0.3 2,241,502 + -0.9 2,241,633 + MPMX26_02185 0.13 -1.6 2,241,704 + MPMX26_02185 0.25 -1.3 2,241,719 + MPMX26_02185 0.27 -0.3 2,241,740 + MPMX26_02185 0.31 -0.1 2,241,740 + MPMX26_02185 0.31 +0.9 2,241,846 + MPMX26_02185 0.48 +0.3 2,241,867 + MPMX26_02185 0.52 -0.6 2,241,867 + MPMX26_02185 0.52 -0.3 2,241,867 + MPMX26_02185 0.52 -1.0 2,241,869 + MPMX26_02185 0.52 +0.5 2,241,900 + MPMX26_02185 0.57 -1.5 2,241,944 + MPMX26_02185 0.65 -1.1 2,241,974 + MPMX26_02185 0.69 -2.0 2,241,984 + MPMX26_02185 0.71 -0.5 2,242,013 + MPMX26_02185 0.76 -0.4 2,242,038 + MPMX26_02185 0.80 -0.4 2,242,038 + MPMX26_02185 0.80 -1.8 2,242,038 + MPMX26_02185 0.80 -1.5 2,242,270 + -1.3 2,242,328 + MPMX26_02186 0.15 -0.8 2,242,328 + MPMX26_02186 0.15 +0.4 2,242,340 + MPMX26_02186 0.16 -1.5 2,242,340 + MPMX26_02186 0.16 -0.3 2,242,366 + MPMX26_02186 0.19 +1.7 2,242,366 + MPMX26_02186 0.19 +0.4 2,242,366 + MPMX26_02186 0.19 -1.1 2,242,366 + MPMX26_02186 0.19 -0.3 2,242,430 + MPMX26_02186 0.25 -0.6 2,242,451 + MPMX26_02186 0.27 -0.6 2,242,451 + MPMX26_02186 0.27 -2.5 2,242,466 + MPMX26_02186 0.29 -1.3 2,242,466 + MPMX26_02186 0.29 -0.5 2,242,490 + MPMX26_02186 0.31 +1.2 2,242,592 + MPMX26_02186 0.41 -1.3 2,242,861 + MPMX26_02186 0.68 +0.7 2,243,013 + MPMX26_02186 0.83 -1.3 2,243,015 + MPMX26_02186 0.83 -0.6 2,243,063 + MPMX26_02186 0.88 +2.9 2,243,087 + -0.6 2,243,087 + -0.5 2,243,092 + +0.4 2,243,092 + -0.7 2,243,092 + +1.7 2,243,092 + -0.8 2,243,092 + -2.0 2,243,093 + -2.0 2,243,131 + -0.1 2,243,131 + +0.7 2,243,149 + +0.1 2,243,158 + -1.0 2,243,158 + -0.9 2,243,158 + -1.0 2,243,158 + -1.6 2,243,160 + -0.3 2,243,376 - +0.1
Or see this region's nucleotide sequence