Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02175

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02173 and MPMX26_02174 are separated by 79 nucleotidesMPMX26_02174 and MPMX26_02175 are separated by 31 nucleotidesMPMX26_02175 and MPMX26_02176 are separated by 16 nucleotidesMPMX26_02176 and MPMX26_02177 are separated by 51 nucleotides MPMX26_02173: MPMX26_02173 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, at 2,228,398 to 2,229,219 _02173 MPMX26_02174: MPMX26_02174 - 7-carboxy-7-deazaguanine synthase, at 2,229,299 to 2,230,009 _02174 MPMX26_02175: MPMX26_02175 - 7-cyano-7-deazaguanine synthase, at 2,230,041 to 2,230,709 _02175 MPMX26_02176: MPMX26_02176 - hypothetical protein, at 2,230,726 to 2,231,136 _02176 MPMX26_02177: MPMX26_02177 - Peroxiredoxin, at 2,231,188 to 2,231,655 _02177 Position (kb) 2230 2231Strain fitness (log2 ratio) -2 -1 0 1 2at 2229.204 kb on + strandat 2229.204 kb on + strandat 2229.214 kb on + strandat 2229.214 kb on + strandat 2229.214 kb on + strandat 2229.230 kb on + strandat 2229.230 kb on + strandat 2229.230 kb on + strandat 2229.230 kb on + strandat 2229.230 kb on + strandat 2229.230 kb on + strandat 2229.230 kb on + strandat 2229.230 kb on + strandat 2229.230 kb on + strandat 2229.230 kb on + strandat 2229.230 kb on + strandat 2229.230 kb on + strandat 2229.230 kb on + strandat 2229.238 kb on - strandat 2229.240 kb on + strandat 2229.246 kb on + strandat 2229.247 kb on + strandat 2229.323 kb on + strandat 2229.347 kb on + strandat 2229.347 kb on + strandat 2229.395 kb on + strand, within MPMX26_02174at 2229.403 kb on + strand, within MPMX26_02174at 2229.411 kb on + strand, within MPMX26_02174at 2229.413 kb on + strand, within MPMX26_02174at 2229.413 kb on + strand, within MPMX26_02174at 2229.413 kb on + strand, within MPMX26_02174at 2229.413 kb on + strand, within MPMX26_02174at 2229.430 kb on + strand, within MPMX26_02174at 2229.436 kb on + strand, within MPMX26_02174at 2229.457 kb on + strand, within MPMX26_02174at 2229.482 kb on + strand, within MPMX26_02174at 2229.526 kb on + strand, within MPMX26_02174at 2229.529 kb on + strand, within MPMX26_02174at 2229.536 kb on + strand, within MPMX26_02174at 2229.536 kb on + strand, within MPMX26_02174at 2229.536 kb on + strand, within MPMX26_02174at 2229.536 kb on + strand, within MPMX26_02174at 2229.536 kb on + strand, within MPMX26_02174at 2229.536 kb on + strand, within MPMX26_02174at 2229.536 kb on + strand, within MPMX26_02174at 2229.536 kb on + strand, within MPMX26_02174at 2229.536 kb on + strand, within MPMX26_02174at 2229.536 kb on + strand, within MPMX26_02174at 2229.536 kb on + strand, within MPMX26_02174at 2229.563 kb on + strand, within MPMX26_02174at 2229.564 kb on + strand, within MPMX26_02174at 2229.572 kb on + strand, within MPMX26_02174at 2229.598 kb on + strand, within MPMX26_02174at 2229.608 kb on + strand, within MPMX26_02174at 2229.642 kb on + strand, within MPMX26_02174at 2229.655 kb on + strand, within MPMX26_02174at 2229.655 kb on + strand, within MPMX26_02174at 2229.655 kb on + strand, within MPMX26_02174at 2229.655 kb on + strand, within MPMX26_02174at 2229.665 kb on + strand, within MPMX26_02174at 2229.675 kb on + strand, within MPMX26_02174at 2229.753 kb on + strand, within MPMX26_02174at 2229.788 kb on + strand, within MPMX26_02174at 2229.794 kb on + strand, within MPMX26_02174at 2229.804 kb on + strand, within MPMX26_02174at 2229.821 kb on + strand, within MPMX26_02174at 2229.821 kb on + strand, within MPMX26_02174at 2229.821 kb on + strand, within MPMX26_02174at 2229.826 kb on + strand, within MPMX26_02174at 2229.826 kb on + strand, within MPMX26_02174at 2229.826 kb on + strand, within MPMX26_02174at 2229.826 kb on + strand, within MPMX26_02174at 2229.826 kb on + strand, within MPMX26_02174at 2229.826 kb on + strand, within MPMX26_02174at 2229.826 kb on + strand, within MPMX26_02174at 2229.826 kb on + strand, within MPMX26_02174at 2229.826 kb on + strand, within MPMX26_02174at 2229.831 kb on + strand, within MPMX26_02174at 2229.831 kb on + strand, within MPMX26_02174at 2229.831 kb on + strand, within MPMX26_02174at 2229.844 kb on + strand, within MPMX26_02174at 2229.844 kb on + strand, within MPMX26_02174at 2229.854 kb on + strand, within MPMX26_02174at 2229.854 kb on + strand, within MPMX26_02174at 2229.854 kb on + strand, within MPMX26_02174at 2229.854 kb on + strand, within MPMX26_02174at 2229.887 kb on + strand, within MPMX26_02174at 2229.905 kb on + strand, within MPMX26_02174at 2229.923 kb on + strand, within MPMX26_02174at 2229.973 kb on + strandat 2229.982 kb on + strandat 2229.982 kb on + strandat 2230.061 kb on + strandat 2230.097 kb on + strandat 2230.097 kb on + strandat 2230.102 kb on + strandat 2230.113 kb on + strand, within MPMX26_02175at 2230.121 kb on + strand, within MPMX26_02175at 2230.121 kb on + strand, within MPMX26_02175at 2230.121 kb on + strand, within MPMX26_02175at 2230.121 kb on + strand, within MPMX26_02175at 2230.121 kb on + strand, within MPMX26_02175at 2230.135 kb on + strand, within MPMX26_02175at 2230.151 kb on + strand, within MPMX26_02175at 2230.151 kb on + strand, within MPMX26_02175at 2230.151 kb on + strand, within MPMX26_02175at 2230.151 kb on + strand, within MPMX26_02175at 2230.151 kb on + strand, within MPMX26_02175at 2230.169 kb on + strand, within MPMX26_02175at 2230.183 kb on + strand, within MPMX26_02175at 2230.201 kb on + strand, within MPMX26_02175at 2230.201 kb on + strand, within MPMX26_02175at 2230.201 kb on + strand, within MPMX26_02175at 2230.201 kb on + strand, within MPMX26_02175at 2230.201 kb on + strand, within MPMX26_02175at 2230.201 kb on + strand, within MPMX26_02175at 2230.201 kb on + strand, within MPMX26_02175at 2230.222 kb on + strand, within MPMX26_02175at 2230.227 kb on + strand, within MPMX26_02175at 2230.241 kb on + strand, within MPMX26_02175at 2230.246 kb on + strand, within MPMX26_02175at 2230.246 kb on + strand, within MPMX26_02175at 2230.281 kb on + strand, within MPMX26_02175at 2230.296 kb on + strand, within MPMX26_02175at 2230.296 kb on + strand, within MPMX26_02175at 2230.296 kb on + strand, within MPMX26_02175at 2230.309 kb on + strand, within MPMX26_02175at 2230.320 kb on + strand, within MPMX26_02175at 2230.340 kb on + strand, within MPMX26_02175at 2230.340 kb on + strand, within MPMX26_02175at 2230.372 kb on + strand, within MPMX26_02175at 2230.379 kb on + strand, within MPMX26_02175at 2230.406 kb on + strand, within MPMX26_02175at 2230.437 kb on + strand, within MPMX26_02175at 2230.472 kb on + strand, within MPMX26_02175at 2230.481 kb on + strand, within MPMX26_02175at 2230.481 kb on + strand, within MPMX26_02175at 2230.569 kb on + strand, within MPMX26_02175at 2230.569 kb on + strand, within MPMX26_02175at 2230.569 kb on + strand, within MPMX26_02175at 2230.575 kb on + strand, within MPMX26_02175at 2230.603 kb on + strand, within MPMX26_02175at 2230.624 kb on + strand, within MPMX26_02175at 2230.642 kb on + strand, within MPMX26_02175at 2230.678 kb on + strandat 2230.680 kb on + strandat 2230.688 kb on + strandat 2230.688 kb on + strandat 2230.688 kb on + strandat 2230.759 kb on + strandat 2230.764 kb on + strandat 2230.764 kb on + strandat 2230.764 kb on + strandat 2230.764 kb on + strandat 2230.764 kb on + strandat 2230.764 kb on + strandat 2230.764 kb on + strandat 2230.764 kb on + strandat 2230.764 kb on + strandat 2230.764 kb on + strandat 2230.764 kb on + strandat 2230.764 kb on + strandat 2230.764 kb on + strandat 2230.764 kb on + strandat 2230.764 kb on + strandat 2230.845 kb on + strand, within MPMX26_02176at 2230.855 kb on + strand, within MPMX26_02176at 2230.860 kb on + strand, within MPMX26_02176at 2230.860 kb on + strand, within MPMX26_02176at 2230.860 kb on + strand, within MPMX26_02176at 2230.934 kb on + strand, within MPMX26_02176at 2230.939 kb on + strand, within MPMX26_02176at 2230.981 kb on + strand, within MPMX26_02176at 2230.991 kb on + strand, within MPMX26_02176at 2231.109 kb on + strandat 2231.155 kb on + strandat 2231.185 kb on + strandat 2231.192 kb on + strandat 2231.223 kb on + strandat 2231.242 kb on + strand, within MPMX26_02177at 2231.300 kb on + strand, within MPMX26_02177at 2231.310 kb on + strand, within MPMX26_02177at 2231.315 kb on + strand, within MPMX26_02177at 2231.320 kb on + strand, within MPMX26_02177at 2231.320 kb on + strand, within MPMX26_02177at 2231.320 kb on + strand, within MPMX26_02177at 2231.320 kb on + strand, within MPMX26_02177at 2231.320 kb on + strand, within MPMX26_02177at 2231.320 kb on + strand, within MPMX26_02177at 2231.355 kb on + strand, within MPMX26_02177at 2231.377 kb on + strand, within MPMX26_02177at 2231.377 kb on + strand, within MPMX26_02177at 2231.377 kb on + strand, within MPMX26_02177at 2231.377 kb on + strand, within MPMX26_02177at 2231.400 kb on + strand, within MPMX26_02177at 2231.451 kb on + strand, within MPMX26_02177at 2231.451 kb on + strand, within MPMX26_02177at 2231.451 kb on + strand, within MPMX26_02177at 2231.451 kb on + strand, within MPMX26_02177at 2231.582 kb on + strand, within MPMX26_02177at 2231.617 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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2,229,204 + +0.3
2,229,204 + -0.2
2,229,214 + -0.2
2,229,214 + +0.6
2,229,214 + -0.2
2,229,230 + +0.4
2,229,230 + -0.5
2,229,230 + -0.5
2,229,230 + -0.3
2,229,230 + +0.1
2,229,230 + -0.1
2,229,230 + -0.5
2,229,230 + -0.2
2,229,230 + +1.1
2,229,230 + -0.0
2,229,230 + -0.2
2,229,230 + +0.1
2,229,230 + -0.0
2,229,238 - -0.5
2,229,240 + -1.4
2,229,246 + +0.0
2,229,247 + -0.0
2,229,323 + -0.5
2,229,347 + -0.9
2,229,347 + -0.8
2,229,395 + MPMX26_02174 0.14 -0.8
2,229,403 + MPMX26_02174 0.15 -0.4
2,229,411 + MPMX26_02174 0.16 -0.7
2,229,413 + MPMX26_02174 0.16 -0.9
2,229,413 + MPMX26_02174 0.16 -0.8
2,229,413 + MPMX26_02174 0.16 -0.7
2,229,413 + MPMX26_02174 0.16 -1.7
2,229,430 + MPMX26_02174 0.18 -0.3
2,229,436 + MPMX26_02174 0.19 -0.5
2,229,457 + MPMX26_02174 0.22 -1.4
2,229,482 + MPMX26_02174 0.26 -0.4
2,229,526 + MPMX26_02174 0.32 -0.4
2,229,529 + MPMX26_02174 0.32 -0.8
2,229,536 + MPMX26_02174 0.33 -0.7
2,229,536 + MPMX26_02174 0.33 -0.1
2,229,536 + MPMX26_02174 0.33 -0.4
2,229,536 + MPMX26_02174 0.33 +0.2
2,229,536 + MPMX26_02174 0.33 -2.5
2,229,536 + MPMX26_02174 0.33 -0.6
2,229,536 + MPMX26_02174 0.33 +2.0
2,229,536 + MPMX26_02174 0.33 -0.5
2,229,536 + MPMX26_02174 0.33 -0.2
2,229,536 + MPMX26_02174 0.33 +0.2
2,229,536 + MPMX26_02174 0.33 -0.9
2,229,563 + MPMX26_02174 0.37 -0.7
2,229,564 + MPMX26_02174 0.37 +0.7
2,229,572 + MPMX26_02174 0.38 -0.3
2,229,598 + MPMX26_02174 0.42 -0.8
2,229,608 + MPMX26_02174 0.43 -0.9
2,229,642 + MPMX26_02174 0.48 -0.2
2,229,655 + MPMX26_02174 0.50 -0.5
2,229,655 + MPMX26_02174 0.50 -1.9
2,229,655 + MPMX26_02174 0.50 -0.3
2,229,655 + MPMX26_02174 0.50 -0.7
2,229,665 + MPMX26_02174 0.51 +0.1
2,229,675 + MPMX26_02174 0.53 -1.0
2,229,753 + MPMX26_02174 0.64 -0.2
2,229,788 + MPMX26_02174 0.69 +0.8
2,229,794 + MPMX26_02174 0.70 -1.6
2,229,804 + MPMX26_02174 0.71 -0.6
2,229,821 + MPMX26_02174 0.73 -0.6
2,229,821 + MPMX26_02174 0.73 -0.7
2,229,821 + MPMX26_02174 0.73 -0.9
2,229,826 + MPMX26_02174 0.74 +0.8
2,229,826 + MPMX26_02174 0.74 -0.7
2,229,826 + MPMX26_02174 0.74 -0.9
2,229,826 + MPMX26_02174 0.74 -0.3
2,229,826 + MPMX26_02174 0.74 -0.1
2,229,826 + MPMX26_02174 0.74 -0.8
2,229,826 + MPMX26_02174 0.74 -1.2
2,229,826 + MPMX26_02174 0.74 -0.3
2,229,826 + MPMX26_02174 0.74 -2.0
2,229,831 + MPMX26_02174 0.75 -1.7
2,229,831 + MPMX26_02174 0.75 -1.2
2,229,831 + MPMX26_02174 0.75 -0.7
2,229,844 + MPMX26_02174 0.77 -2.5
2,229,844 + MPMX26_02174 0.77 -1.1
2,229,854 + MPMX26_02174 0.78 -0.9
2,229,854 + MPMX26_02174 0.78 -0.7
2,229,854 + MPMX26_02174 0.78 +0.3
2,229,854 + MPMX26_02174 0.78 -1.5
2,229,887 + MPMX26_02174 0.83 -0.7
2,229,905 + MPMX26_02174 0.85 +0.6
2,229,923 + MPMX26_02174 0.88 -0.9
2,229,973 + -0.1
2,229,982 + -0.5
2,229,982 + +0.3
2,230,061 + -0.3
2,230,097 + -0.4
2,230,097 + -0.2
2,230,102 + -1.3
2,230,113 + MPMX26_02175 0.11 -0.7
2,230,121 + MPMX26_02175 0.12 -1.1
2,230,121 + MPMX26_02175 0.12 -2.7
2,230,121 + MPMX26_02175 0.12 -0.3
2,230,121 + MPMX26_02175 0.12 -1.7
2,230,121 + MPMX26_02175 0.12 -0.5
2,230,135 + MPMX26_02175 0.14 -0.7
2,230,151 + MPMX26_02175 0.16 +0.1
2,230,151 + MPMX26_02175 0.16 -0.4
2,230,151 + MPMX26_02175 0.16 -2.4
2,230,151 + MPMX26_02175 0.16 -1.0
2,230,151 + MPMX26_02175 0.16 +0.8
2,230,169 + MPMX26_02175 0.19 -0.4
2,230,183 + MPMX26_02175 0.21 -0.3
2,230,201 + MPMX26_02175 0.24 -0.5
2,230,201 + MPMX26_02175 0.24 -0.5
2,230,201 + MPMX26_02175 0.24 -1.0
2,230,201 + MPMX26_02175 0.24 -0.1
2,230,201 + MPMX26_02175 0.24 -2.0
2,230,201 + MPMX26_02175 0.24 -0.3
2,230,201 + MPMX26_02175 0.24 +0.1
2,230,222 + MPMX26_02175 0.27 -2.0
2,230,227 + MPMX26_02175 0.28 -1.5
2,230,241 + MPMX26_02175 0.30 -2.2
2,230,246 + MPMX26_02175 0.31 +0.5
2,230,246 + MPMX26_02175 0.31 -0.3
2,230,281 + MPMX26_02175 0.36 +0.7
2,230,296 + MPMX26_02175 0.38 +0.1
2,230,296 + MPMX26_02175 0.38 -1.8
2,230,296 + MPMX26_02175 0.38 -0.6
2,230,309 + MPMX26_02175 0.40 +1.0
2,230,320 + MPMX26_02175 0.42 -1.0
2,230,340 + MPMX26_02175 0.45 -0.3
2,230,340 + MPMX26_02175 0.45 -0.6
2,230,372 + MPMX26_02175 0.49 -0.4
2,230,379 + MPMX26_02175 0.51 -0.5
2,230,406 + MPMX26_02175 0.55 -0.7
2,230,437 + MPMX26_02175 0.59 -0.9
2,230,472 + MPMX26_02175 0.64 -0.8
2,230,481 + MPMX26_02175 0.66 +0.1
2,230,481 + MPMX26_02175 0.66 -1.2
2,230,569 + MPMX26_02175 0.79 -1.3
2,230,569 + MPMX26_02175 0.79 -1.6
2,230,569 + MPMX26_02175 0.79 -0.9
2,230,575 + MPMX26_02175 0.80 -1.9
2,230,603 + MPMX26_02175 0.84 -0.7
2,230,624 + MPMX26_02175 0.87 -0.5
2,230,642 + MPMX26_02175 0.90 -0.9
2,230,678 + -0.6
2,230,680 + -0.4
2,230,688 + -1.4
2,230,688 + -0.2
2,230,688 + -0.7
2,230,759 + +0.5
2,230,764 + -0.4
2,230,764 + -0.4
2,230,764 + +0.8
2,230,764 + +0.0
2,230,764 + -0.1
2,230,764 + -0.1
2,230,764 + +0.3
2,230,764 + -0.1
2,230,764 + +0.1
2,230,764 + +0.2
2,230,764 + -0.5
2,230,764 + +0.9
2,230,764 + +0.3
2,230,764 + -0.5
2,230,764 + +0.2
2,230,845 + MPMX26_02176 0.29 +0.5
2,230,855 + MPMX26_02176 0.31 -0.6
2,230,860 + MPMX26_02176 0.33 +0.5
2,230,860 + MPMX26_02176 0.33 -0.1
2,230,860 + MPMX26_02176 0.33 -0.1
2,230,934 + MPMX26_02176 0.51 -0.1
2,230,939 + MPMX26_02176 0.52 +0.4
2,230,981 + MPMX26_02176 0.62 +0.0
2,230,991 + MPMX26_02176 0.64 +0.0
2,231,109 + +0.1
2,231,155 + +0.0
2,231,185 + +0.3
2,231,192 + -0.6
2,231,223 + +0.4
2,231,242 + MPMX26_02177 0.12 +0.1
2,231,300 + MPMX26_02177 0.24 -0.3
2,231,310 + MPMX26_02177 0.26 +0.6
2,231,315 + MPMX26_02177 0.27 -0.7
2,231,320 + MPMX26_02177 0.28 +0.1
2,231,320 + MPMX26_02177 0.28 -0.2
2,231,320 + MPMX26_02177 0.28 -0.4
2,231,320 + MPMX26_02177 0.28 -0.0
2,231,320 + MPMX26_02177 0.28 -0.1
2,231,320 + MPMX26_02177 0.28 +0.5
2,231,355 + MPMX26_02177 0.36 -0.2
2,231,377 + MPMX26_02177 0.40 -0.5
2,231,377 + MPMX26_02177 0.40 +0.1
2,231,377 + MPMX26_02177 0.40 -1.0
2,231,377 + MPMX26_02177 0.40 -0.4
2,231,400 + MPMX26_02177 0.45 +0.6
2,231,451 + MPMX26_02177 0.56 -0.7
2,231,451 + MPMX26_02177 0.56 -0.6
2,231,451 + MPMX26_02177 0.56 +0.3
2,231,451 + MPMX26_02177 0.56 +0.2
2,231,582 + MPMX26_02177 0.84 +0.4
2,231,617 + -0.2

Or see this region's nucleotide sequence