Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02107

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02105 and MPMX26_02106 are separated by 25 nucleotidesMPMX26_02106 and MPMX26_02107 are separated by 180 nucleotidesMPMX26_02107 and MPMX26_02108 are separated by 17 nucleotides MPMX26_02105: MPMX26_02105 - NADPH-dependent 7-cyano-7-deazaguanine reductase, at 2,159,316 to 2,160,128 _02105 MPMX26_02106: MPMX26_02106 - hypothetical protein, at 2,160,154 to 2,160,804 _02106 MPMX26_02107: MPMX26_02107 - Peptidoglycan glycosyltransferase MrdB, at 2,160,985 to 2,162,127 _02107 MPMX26_02108: MPMX26_02108 - Membrane-bound lytic murein transglycosylase B, at 2,162,145 to 2,163,146 _02108 Position (kb) 2160 2161 2162 2163Strain fitness (log2 ratio) -2 -1 0 1 2at 2159.991 kb on + strand, within MPMX26_02105at 2160.037 kb on + strand, within MPMX26_02105at 2160.049 kb on + strandat 2160.084 kb on + strandat 2160.084 kb on + strandat 2160.177 kb on + strandat 2160.177 kb on + strandat 2160.237 kb on + strand, within MPMX26_02106at 2160.237 kb on + strand, within MPMX26_02106at 2160.237 kb on + strand, within MPMX26_02106at 2160.237 kb on + strand, within MPMX26_02106at 2160.237 kb on + strand, within MPMX26_02106at 2160.336 kb on + strand, within MPMX26_02106at 2160.336 kb on + strand, within MPMX26_02106at 2160.361 kb on + strand, within MPMX26_02106at 2160.365 kb on + strand, within MPMX26_02106at 2160.365 kb on + strand, within MPMX26_02106at 2160.400 kb on + strand, within MPMX26_02106at 2160.427 kb on + strand, within MPMX26_02106at 2160.427 kb on + strand, within MPMX26_02106at 2160.462 kb on + strand, within MPMX26_02106at 2160.462 kb on + strand, within MPMX26_02106at 2160.462 kb on + strand, within MPMX26_02106at 2160.462 kb on + strand, within MPMX26_02106at 2160.483 kb on + strand, within MPMX26_02106at 2160.483 kb on + strand, within MPMX26_02106at 2160.562 kb on + strand, within MPMX26_02106at 2160.562 kb on + strand, within MPMX26_02106at 2160.572 kb on + strand, within MPMX26_02106at 2160.572 kb on + strand, within MPMX26_02106at 2160.572 kb on + strand, within MPMX26_02106at 2160.577 kb on + strand, within MPMX26_02106at 2160.598 kb on + strand, within MPMX26_02106at 2160.600 kb on + strand, within MPMX26_02106at 2160.647 kb on + strand, within MPMX26_02106at 2160.647 kb on + strand, within MPMX26_02106at 2160.669 kb on + strand, within MPMX26_02106at 2160.691 kb on + strand, within MPMX26_02106at 2160.692 kb on + strand, within MPMX26_02106at 2160.702 kb on + strand, within MPMX26_02106at 2160.702 kb on + strand, within MPMX26_02106at 2160.702 kb on + strand, within MPMX26_02106at 2160.702 kb on + strand, within MPMX26_02106at 2160.702 kb on + strand, within MPMX26_02106at 2160.702 kb on + strand, within MPMX26_02106at 2160.709 kb on + strand, within MPMX26_02106at 2160.724 kb on + strand, within MPMX26_02106at 2160.838 kb on + strandat 2160.838 kb on + strandat 2161.204 kb on + strand, within MPMX26_02107at 2161.290 kb on + strand, within MPMX26_02107at 2161.315 kb on + strand, within MPMX26_02107at 2161.332 kb on + strand, within MPMX26_02107at 2161.332 kb on + strand, within MPMX26_02107at 2161.361 kb on + strand, within MPMX26_02107at 2161.363 kb on + strand, within MPMX26_02107at 2161.510 kb on + strand, within MPMX26_02107at 2161.594 kb on + strand, within MPMX26_02107at 2161.600 kb on + strand, within MPMX26_02107at 2161.600 kb on + strand, within MPMX26_02107at 2161.663 kb on + strand, within MPMX26_02107at 2162.038 kb on + strandat 2162.190 kb on + strandat 2162.190 kb on + strandat 2162.190 kb on + strandat 2162.190 kb on + strandat 2162.190 kb on + strandat 2162.246 kb on + strand, within MPMX26_02108at 2162.282 kb on + strand, within MPMX26_02108at 2162.298 kb on + strand, within MPMX26_02108at 2162.310 kb on + strand, within MPMX26_02108at 2162.319 kb on + strand, within MPMX26_02108at 2162.418 kb on + strand, within MPMX26_02108at 2162.478 kb on + strand, within MPMX26_02108at 2162.478 kb on + strand, within MPMX26_02108at 2162.486 kb on + strand, within MPMX26_02108at 2162.486 kb on + strand, within MPMX26_02108at 2162.495 kb on + strand, within MPMX26_02108at 2162.495 kb on + strand, within MPMX26_02108at 2162.531 kb on + strand, within MPMX26_02108at 2162.874 kb on + strand, within MPMX26_02108at 2162.889 kb on + strand, within MPMX26_02108at 2162.889 kb on + strand, within MPMX26_02108at 2162.899 kb on + strand, within MPMX26_02108at 2162.918 kb on + strand, within MPMX26_02108at 2162.918 kb on + strand, within MPMX26_02108at 2162.924 kb on + strand, within MPMX26_02108at 2162.924 kb on + strand, within MPMX26_02108at 2162.924 kb on + strand, within MPMX26_02108at 2162.930 kb on + strand, within MPMX26_02108at 2162.966 kb on + strand, within MPMX26_02108at 2162.966 kb on + strand, within MPMX26_02108at 2162.966 kb on + strand, within MPMX26_02108at 2162.966 kb on + strand, within MPMX26_02108at 2162.966 kb on + strand, within MPMX26_02108at 2162.966 kb on + strand, within MPMX26_02108at 2163.089 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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2,159,991 + MPMX26_02105 0.83 +1.7
2,160,037 + MPMX26_02105 0.89 -0.1
2,160,049 + +0.2
2,160,084 + -2.2
2,160,084 + +1.2
2,160,177 + -0.4
2,160,177 + +0.0
2,160,237 + MPMX26_02106 0.13 -0.4
2,160,237 + MPMX26_02106 0.13 -0.2
2,160,237 + MPMX26_02106 0.13 +0.3
2,160,237 + MPMX26_02106 0.13 +0.2
2,160,237 + MPMX26_02106 0.13 +0.5
2,160,336 + MPMX26_02106 0.28 +0.0
2,160,336 + MPMX26_02106 0.28 +0.4
2,160,361 + MPMX26_02106 0.32 -0.4
2,160,365 + MPMX26_02106 0.32 +1.3
2,160,365 + MPMX26_02106 0.32 +0.3
2,160,400 + MPMX26_02106 0.38 -0.1
2,160,427 + MPMX26_02106 0.42 +0.1
2,160,427 + MPMX26_02106 0.42 -0.0
2,160,462 + MPMX26_02106 0.47 +0.1
2,160,462 + MPMX26_02106 0.47 +0.2
2,160,462 + MPMX26_02106 0.47 +0.1
2,160,462 + MPMX26_02106 0.47 +0.2
2,160,483 + MPMX26_02106 0.51 +0.4
2,160,483 + MPMX26_02106 0.51 +0.4
2,160,562 + MPMX26_02106 0.63 +0.1
2,160,562 + MPMX26_02106 0.63 +0.6
2,160,572 + MPMX26_02106 0.64 +0.3
2,160,572 + MPMX26_02106 0.64 -0.0
2,160,572 + MPMX26_02106 0.64 +0.1
2,160,577 + MPMX26_02106 0.65 -0.1
2,160,598 + MPMX26_02106 0.68 -0.4
2,160,600 + MPMX26_02106 0.69 +0.2
2,160,647 + MPMX26_02106 0.76 -0.2
2,160,647 + MPMX26_02106 0.76 -0.1
2,160,669 + MPMX26_02106 0.79 +0.4
2,160,691 + MPMX26_02106 0.82 +0.3
2,160,692 + MPMX26_02106 0.83 +0.7
2,160,702 + MPMX26_02106 0.84 -0.2
2,160,702 + MPMX26_02106 0.84 +0.3
2,160,702 + MPMX26_02106 0.84 +0.2
2,160,702 + MPMX26_02106 0.84 +0.4
2,160,702 + MPMX26_02106 0.84 +0.3
2,160,702 + MPMX26_02106 0.84 -1.2
2,160,709 + MPMX26_02106 0.85 +1.2
2,160,724 + MPMX26_02106 0.88 +0.1
2,160,838 + +0.3
2,160,838 + +2.1
2,161,204 + MPMX26_02107 0.19 +1.1
2,161,290 + MPMX26_02107 0.27 -0.4
2,161,315 + MPMX26_02107 0.29 +0.1
2,161,332 + MPMX26_02107 0.30 -0.5
2,161,332 + MPMX26_02107 0.30 -0.7
2,161,361 + MPMX26_02107 0.33 -1.1
2,161,363 + MPMX26_02107 0.33 -0.1
2,161,510 + MPMX26_02107 0.46 +0.7
2,161,594 + MPMX26_02107 0.53 -0.9
2,161,600 + MPMX26_02107 0.54 -2.3
2,161,600 + MPMX26_02107 0.54 -1.3
2,161,663 + MPMX26_02107 0.59 +0.7
2,162,038 + -0.8
2,162,190 + +1.2
2,162,190 + -0.1
2,162,190 + -1.1
2,162,190 + +0.5
2,162,190 + +0.2
2,162,246 + MPMX26_02108 0.10 -0.2
2,162,282 + MPMX26_02108 0.14 +0.4
2,162,298 + MPMX26_02108 0.15 -0.1
2,162,310 + MPMX26_02108 0.16 +0.2
2,162,319 + MPMX26_02108 0.17 -0.3
2,162,418 + MPMX26_02108 0.27 +0.1
2,162,478 + MPMX26_02108 0.33 +0.1
2,162,478 + MPMX26_02108 0.33 +0.2
2,162,486 + MPMX26_02108 0.34 +0.6
2,162,486 + MPMX26_02108 0.34 -1.1
2,162,495 + MPMX26_02108 0.35 -0.5
2,162,495 + MPMX26_02108 0.35 +0.2
2,162,531 + MPMX26_02108 0.39 +0.0
2,162,874 + MPMX26_02108 0.73 -0.0
2,162,889 + MPMX26_02108 0.74 -0.6
2,162,889 + MPMX26_02108 0.74 -0.0
2,162,899 + MPMX26_02108 0.75 +2.1
2,162,918 + MPMX26_02108 0.77 -0.5
2,162,918 + MPMX26_02108 0.77 -0.1
2,162,924 + MPMX26_02108 0.78 +0.0
2,162,924 + MPMX26_02108 0.78 +0.1
2,162,924 + MPMX26_02108 0.78 +0.2
2,162,930 + MPMX26_02108 0.78 +0.2
2,162,966 + MPMX26_02108 0.82 +0.5
2,162,966 + MPMX26_02108 0.82 -0.1
2,162,966 + MPMX26_02108 0.82 +0.0
2,162,966 + MPMX26_02108 0.82 +0.6
2,162,966 + MPMX26_02108 0.82 -0.6
2,162,966 + MPMX26_02108 0.82 +0.2
2,163,089 + -0.0

Or see this region's nucleotide sequence