Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02027

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02025 and MPMX26_02026 are separated by 99 nucleotidesMPMX26_02026 and MPMX26_02027 are separated by 97 nucleotidesMPMX26_02027 and MPMX26_02028 are separated by 2 nucleotides MPMX26_02025: MPMX26_02025 - Anthranilate phosphoribosyltransferase, at 2,091,876 to 2,092,877 _02025 MPMX26_02026: MPMX26_02026 - hypothetical protein, at 2,092,977 to 2,093,318 _02026 MPMX26_02027: MPMX26_02027 - hypothetical protein, at 2,093,416 to 2,093,688 _02027 MPMX26_02028: MPMX26_02028 - NAD kinase, at 2,093,691 to 2,094,596 _02028 Position (kb) 2093 2094Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2092.422 kb on + strand, within MPMX26_02025at 2092.422 kb on + strand, within MPMX26_02025at 2092.428 kb on + strand, within MPMX26_02025at 2092.484 kb on + strand, within MPMX26_02025at 2092.545 kb on + strand, within MPMX26_02025at 2092.554 kb on + strand, within MPMX26_02025at 2092.559 kb on + strand, within MPMX26_02025at 2092.569 kb on + strand, within MPMX26_02025at 2092.569 kb on + strand, within MPMX26_02025at 2092.569 kb on + strand, within MPMX26_02025at 2092.569 kb on + strand, within MPMX26_02025at 2092.608 kb on + strand, within MPMX26_02025at 2092.622 kb on + strand, within MPMX26_02025at 2092.622 kb on + strand, within MPMX26_02025at 2092.664 kb on + strand, within MPMX26_02025at 2092.749 kb on + strand, within MPMX26_02025at 2092.801 kb on + strandat 2092.818 kb on + strandat 2093.019 kb on + strand, within MPMX26_02026at 2093.404 kb on - strandat 2093.459 kb on - strand, within MPMX26_02027at 2093.473 kb on - strand, within MPMX26_02027at 2093.507 kb on - strand, within MPMX26_02027at 2093.513 kb on + strand, within MPMX26_02027at 2093.541 kb on - strand, within MPMX26_02027at 2093.541 kb on - strand, within MPMX26_02027at 2093.541 kb on - strand, within MPMX26_02027at 2093.541 kb on - strand, within MPMX26_02027at 2093.541 kb on - strand, within MPMX26_02027at 2093.541 kb on - strand, within MPMX26_02027at 2093.577 kb on - strand, within MPMX26_02027at 2093.684 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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2,092,422 + MPMX26_02025 0.54 +0.0
2,092,422 + MPMX26_02025 0.54 +0.0
2,092,428 + MPMX26_02025 0.55 +1.2
2,092,484 + MPMX26_02025 0.61 -0.3
2,092,545 + MPMX26_02025 0.67 +1.5
2,092,554 + MPMX26_02025 0.68 +0.6
2,092,559 + MPMX26_02025 0.68 -0.4
2,092,569 + MPMX26_02025 0.69 +0.6
2,092,569 + MPMX26_02025 0.69 -1.0
2,092,569 + MPMX26_02025 0.69 +0.2
2,092,569 + MPMX26_02025 0.69 -0.3
2,092,608 + MPMX26_02025 0.73 -0.6
2,092,622 + MPMX26_02025 0.74 +0.9
2,092,622 + MPMX26_02025 0.74 -0.4
2,092,664 + MPMX26_02025 0.79 +0.2
2,092,749 + MPMX26_02025 0.87 +1.6
2,092,801 + +0.2
2,092,818 + -0.2
2,093,019 + MPMX26_02026 0.12 -0.7
2,093,404 - +2.9
2,093,459 - MPMX26_02027 0.16 -0.7
2,093,473 - MPMX26_02027 0.21 -1.0
2,093,507 - MPMX26_02027 0.33 -0.5
2,093,513 + MPMX26_02027 0.36 -1.2
2,093,541 - MPMX26_02027 0.46 -0.2
2,093,541 - MPMX26_02027 0.46 -1.8
2,093,541 - MPMX26_02027 0.46 -1.4
2,093,541 - MPMX26_02027 0.46 -3.1
2,093,541 - MPMX26_02027 0.46 +0.0
2,093,541 - MPMX26_02027 0.46 -2.2
2,093,577 - MPMX26_02027 0.59 -0.4
2,093,684 - -1.2

Or see this region's nucleotide sequence