Experiment: UV exposure at 150J/m2 for 20 seconds
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02025 and MPMX26_02026 are separated by 99 nucleotides MPMX26_02026 and MPMX26_02027 are separated by 97 nucleotides MPMX26_02027 and MPMX26_02028 are separated by 2 nucleotides
MPMX26_02025: MPMX26_02025 - Anthranilate phosphoribosyltransferase, at 2,091,876 to 2,092,877
_02025
MPMX26_02026: MPMX26_02026 - hypothetical protein, at 2,092,977 to 2,093,318
_02026
MPMX26_02027: MPMX26_02027 - hypothetical protein, at 2,093,416 to 2,093,688
_02027
MPMX26_02028: MPMX26_02028 - NAD kinase, at 2,093,691 to 2,094,596
_02028
Position (kb)
2093
2094 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2092.422 kb on + strand, within MPMX26_02025 at 2092.422 kb on + strand, within MPMX26_02025 at 2092.428 kb on + strand, within MPMX26_02025 at 2092.484 kb on + strand, within MPMX26_02025 at 2092.545 kb on + strand, within MPMX26_02025 at 2092.554 kb on + strand, within MPMX26_02025 at 2092.559 kb on + strand, within MPMX26_02025 at 2092.569 kb on + strand, within MPMX26_02025 at 2092.569 kb on + strand, within MPMX26_02025 at 2092.569 kb on + strand, within MPMX26_02025 at 2092.569 kb on + strand, within MPMX26_02025 at 2092.608 kb on + strand, within MPMX26_02025 at 2092.622 kb on + strand, within MPMX26_02025 at 2092.622 kb on + strand, within MPMX26_02025 at 2092.664 kb on + strand, within MPMX26_02025 at 2092.749 kb on + strand, within MPMX26_02025 at 2092.801 kb on + strand at 2092.818 kb on + strand at 2093.019 kb on + strand, within MPMX26_02026 at 2093.404 kb on - strand at 2093.459 kb on - strand, within MPMX26_02027 at 2093.473 kb on - strand, within MPMX26_02027 at 2093.507 kb on - strand, within MPMX26_02027 at 2093.513 kb on + strand, within MPMX26_02027 at 2093.541 kb on - strand, within MPMX26_02027 at 2093.541 kb on - strand, within MPMX26_02027 at 2093.541 kb on - strand, within MPMX26_02027 at 2093.541 kb on - strand, within MPMX26_02027 at 2093.541 kb on - strand, within MPMX26_02027 at 2093.541 kb on - strand, within MPMX26_02027 at 2093.577 kb on - strand, within MPMX26_02027 at 2093.684 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds remove 2,092,422 + MPMX26_02025 0.54 +0.0 2,092,422 + MPMX26_02025 0.54 +0.0 2,092,428 + MPMX26_02025 0.55 +1.2 2,092,484 + MPMX26_02025 0.61 -0.3 2,092,545 + MPMX26_02025 0.67 +1.5 2,092,554 + MPMX26_02025 0.68 +0.6 2,092,559 + MPMX26_02025 0.68 -0.4 2,092,569 + MPMX26_02025 0.69 +0.6 2,092,569 + MPMX26_02025 0.69 -1.0 2,092,569 + MPMX26_02025 0.69 +0.2 2,092,569 + MPMX26_02025 0.69 -0.3 2,092,608 + MPMX26_02025 0.73 -0.6 2,092,622 + MPMX26_02025 0.74 +0.9 2,092,622 + MPMX26_02025 0.74 -0.4 2,092,664 + MPMX26_02025 0.79 +0.2 2,092,749 + MPMX26_02025 0.87 +1.6 2,092,801 + +0.2 2,092,818 + -0.2 2,093,019 + MPMX26_02026 0.12 -0.7 2,093,404 - +2.9 2,093,459 - MPMX26_02027 0.16 -0.7 2,093,473 - MPMX26_02027 0.21 -1.0 2,093,507 - MPMX26_02027 0.33 -0.5 2,093,513 + MPMX26_02027 0.36 -1.2 2,093,541 - MPMX26_02027 0.46 -0.2 2,093,541 - MPMX26_02027 0.46 -1.8 2,093,541 - MPMX26_02027 0.46 -1.4 2,093,541 - MPMX26_02027 0.46 -3.1 2,093,541 - MPMX26_02027 0.46 +0.0 2,093,541 - MPMX26_02027 0.46 -2.2 2,093,577 - MPMX26_02027 0.59 -0.4 2,093,684 - -1.2
Or see this region's nucleotide sequence