Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01867

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01866 and MPMX26_01867 are separated by 22 nucleotidesMPMX26_01867 and MPMX26_01868 are separated by 25 nucleotides MPMX26_01866: MPMX26_01866 - Formate-dependent phosphoribosylglycinamide formyltransferase, at 1,902,960 to 1,904,168 _01866 MPMX26_01867: MPMX26_01867 - Bifunctional uridylyltransferase/uridylyl-removing enzyme, at 1,904,191 to 1,906,857 _01867 MPMX26_01868: MPMX26_01868 - LL-diaminopimelate aminotransferase, at 1,906,883 to 1,908,052 _01868 Position (kb) 1904 1905 1906 1907Strain fitness (log2 ratio) -3 -2 -1 0 1at 1903.263 kb on + strand, within MPMX26_01866at 1903.277 kb on + strand, within MPMX26_01866at 1903.296 kb on + strand, within MPMX26_01866at 1903.319 kb on + strand, within MPMX26_01866at 1903.335 kb on + strand, within MPMX26_01866at 1903.335 kb on + strand, within MPMX26_01866at 1903.349 kb on + strand, within MPMX26_01866at 1903.385 kb on + strand, within MPMX26_01866at 1903.460 kb on + strand, within MPMX26_01866at 1903.494 kb on + strand, within MPMX26_01866at 1903.501 kb on + strand, within MPMX26_01866at 1903.511 kb on + strand, within MPMX26_01866at 1903.511 kb on + strand, within MPMX26_01866at 1903.511 kb on + strand, within MPMX26_01866at 1903.532 kb on + strand, within MPMX26_01866at 1903.532 kb on + strand, within MPMX26_01866at 1903.532 kb on + strand, within MPMX26_01866at 1903.538 kb on + strand, within MPMX26_01866at 1903.538 kb on + strand, within MPMX26_01866at 1903.538 kb on + strand, within MPMX26_01866at 1903.694 kb on + strand, within MPMX26_01866at 1903.711 kb on + strand, within MPMX26_01866at 1903.747 kb on + strand, within MPMX26_01866at 1903.747 kb on + strand, within MPMX26_01866at 1903.747 kb on + strand, within MPMX26_01866at 1903.747 kb on + strand, within MPMX26_01866at 1903.747 kb on + strand, within MPMX26_01866at 1903.757 kb on + strand, within MPMX26_01866at 1903.757 kb on + strand, within MPMX26_01866at 1903.762 kb on + strand, within MPMX26_01866at 1903.800 kb on + strand, within MPMX26_01866at 1903.805 kb on + strand, within MPMX26_01866at 1903.805 kb on + strand, within MPMX26_01866at 1903.810 kb on + strand, within MPMX26_01866at 1903.821 kb on + strand, within MPMX26_01866at 1903.821 kb on + strand, within MPMX26_01866at 1903.835 kb on + strand, within MPMX26_01866at 1903.845 kb on + strand, within MPMX26_01866at 1903.845 kb on + strand, within MPMX26_01866at 1903.855 kb on + strand, within MPMX26_01866at 1903.868 kb on + strand, within MPMX26_01866at 1903.902 kb on + strand, within MPMX26_01866at 1903.902 kb on + strand, within MPMX26_01866at 1903.902 kb on + strand, within MPMX26_01866at 1903.902 kb on + strand, within MPMX26_01866at 1903.902 kb on + strand, within MPMX26_01866at 1903.902 kb on + strand, within MPMX26_01866at 1903.902 kb on + strand, within MPMX26_01866at 1903.902 kb on + strand, within MPMX26_01866at 1903.902 kb on + strand, within MPMX26_01866at 1903.902 kb on + strand, within MPMX26_01866at 1903.902 kb on + strand, within MPMX26_01866at 1903.916 kb on + strand, within MPMX26_01866at 1903.936 kb on + strand, within MPMX26_01866at 1903.936 kb on + strand, within MPMX26_01866at 1903.936 kb on + strand, within MPMX26_01866at 1903.936 kb on + strand, within MPMX26_01866at 1903.936 kb on + strand, within MPMX26_01866at 1903.936 kb on + strand, within MPMX26_01866at 1903.936 kb on + strand, within MPMX26_01866at 1903.936 kb on + strand, within MPMX26_01866at 1903.936 kb on + strand, within MPMX26_01866at 1903.938 kb on + strand, within MPMX26_01866at 1903.938 kb on + strand, within MPMX26_01866at 1903.943 kb on + strand, within MPMX26_01866at 1903.965 kb on + strand, within MPMX26_01866at 1903.975 kb on + strand, within MPMX26_01866at 1903.975 kb on + strand, within MPMX26_01866at 1903.975 kb on + strand, within MPMX26_01866at 1904.012 kb on + strand, within MPMX26_01866at 1904.056 kb on + strandat 1904.066 kb on + strandat 1904.071 kb on + strandat 1904.071 kb on + strandat 1904.076 kb on + strandat 1904.076 kb on + strandat 1904.211 kb on + strandat 1905.141 kb on + strand, within MPMX26_01867at 1905.223 kb on + strand, within MPMX26_01867at 1905.244 kb on + strand, within MPMX26_01867at 1905.244 kb on + strand, within MPMX26_01867at 1905.244 kb on + strand, within MPMX26_01867at 1905.278 kb on + strand, within MPMX26_01867at 1905.278 kb on + strand, within MPMX26_01867at 1905.331 kb on + strand, within MPMX26_01867at 1905.331 kb on + strand, within MPMX26_01867at 1905.331 kb on + strand, within MPMX26_01867at 1905.331 kb on + strand, within MPMX26_01867at 1905.437 kb on + strand, within MPMX26_01867at 1905.484 kb on + strand, within MPMX26_01867at 1905.607 kb on + strand, within MPMX26_01867at 1905.706 kb on + strand, within MPMX26_01867at 1905.706 kb on + strand, within MPMX26_01867at 1905.720 kb on + strand, within MPMX26_01867at 1905.721 kb on + strand, within MPMX26_01867at 1905.774 kb on + strand, within MPMX26_01867at 1905.834 kb on + strand, within MPMX26_01867at 1905.844 kb on + strand, within MPMX26_01867at 1905.855 kb on + strand, within MPMX26_01867at 1905.918 kb on + strand, within MPMX26_01867at 1905.924 kb on + strand, within MPMX26_01867at 1905.924 kb on + strand, within MPMX26_01867at 1905.991 kb on + strand, within MPMX26_01867at 1906.903 kb on + strandat 1906.909 kb on + strandat 1906.909 kb on + strandat 1906.981 kb on + strandat 1906.981 kb on + strandat 1906.981 kb on + strandat 1906.981 kb on + strandat 1906.981 kb on + strandat 1906.981 kb on + strandat 1906.985 kb on + strandat 1906.993 kb on + strandat 1907.050 kb on + strand, within MPMX26_01868at 1907.060 kb on + strand, within MPMX26_01868at 1907.070 kb on + strand, within MPMX26_01868at 1907.074 kb on + strand, within MPMX26_01868at 1907.075 kb on + strand, within MPMX26_01868at 1907.090 kb on + strand, within MPMX26_01868at 1907.095 kb on + strand, within MPMX26_01868at 1907.095 kb on + strand, within MPMX26_01868at 1907.095 kb on + strand, within MPMX26_01868at 1907.095 kb on + strand, within MPMX26_01868at 1907.198 kb on + strand, within MPMX26_01868at 1907.198 kb on + strand, within MPMX26_01868at 1907.203 kb on + strand, within MPMX26_01868at 1907.221 kb on + strand, within MPMX26_01868at 1907.222 kb on + strand, within MPMX26_01868at 1907.231 kb on + strand, within MPMX26_01868at 1907.270 kb on + strand, within MPMX26_01868at 1907.278 kb on + strand, within MPMX26_01868at 1907.294 kb on + strand, within MPMX26_01868at 1907.294 kb on + strand, within MPMX26_01868at 1907.297 kb on + strand, within MPMX26_01868at 1907.335 kb on + strand, within MPMX26_01868at 1907.348 kb on + strand, within MPMX26_01868at 1907.386 kb on + strand, within MPMX26_01868at 1907.401 kb on + strand, within MPMX26_01868at 1907.425 kb on + strand, within MPMX26_01868at 1907.425 kb on + strand, within MPMX26_01868at 1907.489 kb on + strand, within MPMX26_01868at 1907.494 kb on + strand, within MPMX26_01868at 1907.494 kb on + strand, within MPMX26_01868at 1907.525 kb on + strand, within MPMX26_01868at 1907.531 kb on + strand, within MPMX26_01868at 1907.537 kb on + strand, within MPMX26_01868at 1907.537 kb on + strand, within MPMX26_01868at 1907.537 kb on + strand, within MPMX26_01868at 1907.537 kb on + strand, within MPMX26_01868at 1907.537 kb on + strand, within MPMX26_01868at 1907.547 kb on + strand, within MPMX26_01868at 1907.585 kb on + strand, within MPMX26_01868at 1907.659 kb on + strand, within MPMX26_01868at 1907.659 kb on + strand, within MPMX26_01868at 1907.659 kb on + strand, within MPMX26_01868at 1907.659 kb on + strand, within MPMX26_01868at 1907.659 kb on + strand, within MPMX26_01868at 1907.659 kb on + strand, within MPMX26_01868at 1907.659 kb on + strand, within MPMX26_01868at 1907.659 kb on + strand, within MPMX26_01868at 1907.659 kb on + strand, within MPMX26_01868at 1907.659 kb on + strand, within MPMX26_01868at 1907.659 kb on + strand, within MPMX26_01868at 1907.659 kb on + strand, within MPMX26_01868at 1907.659 kb on + strand, within MPMX26_01868at 1907.689 kb on + strand, within MPMX26_01868at 1907.699 kb on + strand, within MPMX26_01868at 1907.699 kb on + strand, within MPMX26_01868at 1907.744 kb on + strand, within MPMX26_01868

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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1,903,263 + MPMX26_01866 0.25 -0.0
1,903,277 + MPMX26_01866 0.26 +0.3
1,903,296 + MPMX26_01866 0.28 -0.3
1,903,319 + MPMX26_01866 0.30 +0.3
1,903,335 + MPMX26_01866 0.31 +0.0
1,903,335 + MPMX26_01866 0.31 -0.1
1,903,349 + MPMX26_01866 0.32 -0.0
1,903,385 + MPMX26_01866 0.35 +0.7
1,903,460 + MPMX26_01866 0.41 -0.3
1,903,494 + MPMX26_01866 0.44 -0.2
1,903,501 + MPMX26_01866 0.45 +0.9
1,903,511 + MPMX26_01866 0.46 +0.1
1,903,511 + MPMX26_01866 0.46 -0.8
1,903,511 + MPMX26_01866 0.46 +0.4
1,903,532 + MPMX26_01866 0.47 +0.6
1,903,532 + MPMX26_01866 0.47 +0.1
1,903,532 + MPMX26_01866 0.47 -0.4
1,903,538 + MPMX26_01866 0.48 +0.1
1,903,538 + MPMX26_01866 0.48 -0.3
1,903,538 + MPMX26_01866 0.48 +0.2
1,903,694 + MPMX26_01866 0.61 +0.2
1,903,711 + MPMX26_01866 0.62 +1.0
1,903,747 + MPMX26_01866 0.65 +0.0
1,903,747 + MPMX26_01866 0.65 -0.4
1,903,747 + MPMX26_01866 0.65 +0.6
1,903,747 + MPMX26_01866 0.65 +1.3
1,903,747 + MPMX26_01866 0.65 +0.9
1,903,757 + MPMX26_01866 0.66 +0.1
1,903,757 + MPMX26_01866 0.66 -0.3
1,903,762 + MPMX26_01866 0.66 -0.6
1,903,800 + MPMX26_01866 0.69 -0.2
1,903,805 + MPMX26_01866 0.70 -0.3
1,903,805 + MPMX26_01866 0.70 +0.7
1,903,810 + MPMX26_01866 0.70 +0.7
1,903,821 + MPMX26_01866 0.71 +0.5
1,903,821 + MPMX26_01866 0.71 +0.4
1,903,835 + MPMX26_01866 0.72 -0.2
1,903,845 + MPMX26_01866 0.73 -0.2
1,903,845 + MPMX26_01866 0.73 -0.3
1,903,855 + MPMX26_01866 0.74 -0.4
1,903,868 + MPMX26_01866 0.75 +0.7
1,903,902 + MPMX26_01866 0.78 +0.7
1,903,902 + MPMX26_01866 0.78 +0.3
1,903,902 + MPMX26_01866 0.78 +0.1
1,903,902 + MPMX26_01866 0.78 +0.3
1,903,902 + MPMX26_01866 0.78 +0.1
1,903,902 + MPMX26_01866 0.78 -0.2
1,903,902 + MPMX26_01866 0.78 -0.4
1,903,902 + MPMX26_01866 0.78 +0.0
1,903,902 + MPMX26_01866 0.78 +0.0
1,903,902 + MPMX26_01866 0.78 -0.2
1,903,902 + MPMX26_01866 0.78 -0.3
1,903,916 + MPMX26_01866 0.79 -0.1
1,903,936 + MPMX26_01866 0.81 -0.8
1,903,936 + MPMX26_01866 0.81 +1.6
1,903,936 + MPMX26_01866 0.81 -0.5
1,903,936 + MPMX26_01866 0.81 -0.2
1,903,936 + MPMX26_01866 0.81 -0.5
1,903,936 + MPMX26_01866 0.81 -0.2
1,903,936 + MPMX26_01866 0.81 -1.0
1,903,936 + MPMX26_01866 0.81 -0.9
1,903,936 + MPMX26_01866 0.81 +0.8
1,903,938 + MPMX26_01866 0.81 -0.5
1,903,938 + MPMX26_01866 0.81 +0.3
1,903,943 + MPMX26_01866 0.81 -0.0
1,903,965 + MPMX26_01866 0.83 +0.1
1,903,975 + MPMX26_01866 0.84 -0.4
1,903,975 + MPMX26_01866 0.84 -0.1
1,903,975 + MPMX26_01866 0.84 -0.3
1,904,012 + MPMX26_01866 0.87 -0.1
1,904,056 + +0.4
1,904,066 + +0.5
1,904,071 + +0.0
1,904,071 + -0.5
1,904,076 + -0.2
1,904,076 + +0.1
1,904,211 + -0.7
1,905,141 + MPMX26_01867 0.36 -1.6
1,905,223 + MPMX26_01867 0.39 -0.7
1,905,244 + MPMX26_01867 0.39 +0.6
1,905,244 + MPMX26_01867 0.39 -0.1
1,905,244 + MPMX26_01867 0.39 -0.4
1,905,278 + MPMX26_01867 0.41 -0.4
1,905,278 + MPMX26_01867 0.41 -1.0
1,905,331 + MPMX26_01867 0.43 -0.4
1,905,331 + MPMX26_01867 0.43 -0.6
1,905,331 + MPMX26_01867 0.43 -0.8
1,905,331 + MPMX26_01867 0.43 -1.5
1,905,437 + MPMX26_01867 0.47 -2.5
1,905,484 + MPMX26_01867 0.48 -3.0
1,905,607 + MPMX26_01867 0.53 +0.6
1,905,706 + MPMX26_01867 0.57 -0.8
1,905,706 + MPMX26_01867 0.57 -1.2
1,905,720 + MPMX26_01867 0.57 -0.3
1,905,721 + MPMX26_01867 0.57 -0.5
1,905,774 + MPMX26_01867 0.59 -0.9
1,905,834 + MPMX26_01867 0.62 -0.6
1,905,844 + MPMX26_01867 0.62 -1.4
1,905,855 + MPMX26_01867 0.62 -0.4
1,905,918 + MPMX26_01867 0.65 -0.3
1,905,924 + MPMX26_01867 0.65 -0.6
1,905,924 + MPMX26_01867 0.65 -0.9
1,905,991 + MPMX26_01867 0.67 -1.1
1,906,903 + +0.5
1,906,909 + -0.7
1,906,909 + -0.0
1,906,981 + -0.6
1,906,981 + +0.3
1,906,981 + -0.3
1,906,981 + -1.1
1,906,981 + -0.7
1,906,981 + +0.0
1,906,985 + -0.3
1,906,993 + -0.6
1,907,050 + MPMX26_01868 0.14 +0.6
1,907,060 + MPMX26_01868 0.15 +0.0
1,907,070 + MPMX26_01868 0.16 -0.1
1,907,074 + MPMX26_01868 0.16 -0.2
1,907,075 + MPMX26_01868 0.16 +0.4
1,907,090 + MPMX26_01868 0.18 -0.1
1,907,095 + MPMX26_01868 0.18 -0.6
1,907,095 + MPMX26_01868 0.18 -0.1
1,907,095 + MPMX26_01868 0.18 +0.0
1,907,095 + MPMX26_01868 0.18 -1.2
1,907,198 + MPMX26_01868 0.27 -0.3
1,907,198 + MPMX26_01868 0.27 -0.1
1,907,203 + MPMX26_01868 0.27 +0.9
1,907,221 + MPMX26_01868 0.29 -0.3
1,907,222 + MPMX26_01868 0.29 +0.1
1,907,231 + MPMX26_01868 0.30 +0.1
1,907,270 + MPMX26_01868 0.33 -0.0
1,907,278 + MPMX26_01868 0.34 -0.3
1,907,294 + MPMX26_01868 0.35 -0.3
1,907,294 + MPMX26_01868 0.35 -0.7
1,907,297 + MPMX26_01868 0.35 +0.4
1,907,335 + MPMX26_01868 0.39 -1.4
1,907,348 + MPMX26_01868 0.40 -0.6
1,907,386 + MPMX26_01868 0.43 +0.4
1,907,401 + MPMX26_01868 0.44 +0.0
1,907,425 + MPMX26_01868 0.46 -0.4
1,907,425 + MPMX26_01868 0.46 -0.0
1,907,489 + MPMX26_01868 0.52 -0.3
1,907,494 + MPMX26_01868 0.52 -0.9
1,907,494 + MPMX26_01868 0.52 -0.6
1,907,525 + MPMX26_01868 0.55 -0.0
1,907,531 + MPMX26_01868 0.55 +0.3
1,907,537 + MPMX26_01868 0.56 +0.5
1,907,537 + MPMX26_01868 0.56 +0.4
1,907,537 + MPMX26_01868 0.56 +0.0
1,907,537 + MPMX26_01868 0.56 -0.1
1,907,537 + MPMX26_01868 0.56 -0.3
1,907,547 + MPMX26_01868 0.57 +0.6
1,907,585 + MPMX26_01868 0.60 -0.7
1,907,659 + MPMX26_01868 0.66 +0.3
1,907,659 + MPMX26_01868 0.66 -0.8
1,907,659 + MPMX26_01868 0.66 +0.4
1,907,659 + MPMX26_01868 0.66 -0.3
1,907,659 + MPMX26_01868 0.66 -0.4
1,907,659 + MPMX26_01868 0.66 -0.3
1,907,659 + MPMX26_01868 0.66 -0.6
1,907,659 + MPMX26_01868 0.66 +0.4
1,907,659 + MPMX26_01868 0.66 +0.7
1,907,659 + MPMX26_01868 0.66 -0.6
1,907,659 + MPMX26_01868 0.66 -0.2
1,907,659 + MPMX26_01868 0.66 +0.3
1,907,659 + MPMX26_01868 0.66 -0.7
1,907,689 + MPMX26_01868 0.69 +0.0
1,907,699 + MPMX26_01868 0.70 -0.2
1,907,699 + MPMX26_01868 0.70 -0.1
1,907,744 + MPMX26_01868 0.74 +0.5

Or see this region's nucleotide sequence