Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01727

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01726 and MPMX26_01727 are separated by 167 nucleotidesMPMX26_01727 and MPMX26_01728 are separated by 18 nucleotidesMPMX26_01728 and MPMX26_01729 are separated by 121 nucleotides MPMX26_01726: MPMX26_01726 - Glutamine--tRNA ligase, at 1,781,637 to 1,783,361 _01726 MPMX26_01727: MPMX26_01727 - Peptidyl-prolyl cis-trans isomerase cyp18, at 1,783,529 to 1,784,038 _01727 MPMX26_01728: MPMX26_01728 - UDP-2,3-diacylglucosamine hydrolase, at 1,784,057 to 1,784,776 _01728 MPMX26_01729: MPMX26_01729 - Oxygen-insensitive NAD(P)H nitroreductase, at 1,784,898 to 1,785,551 _01729 Position (kb) 1783 1784 1785Strain fitness (log2 ratio) -2 -1 0 1at 1783.461 kb on + strandat 1783.519 kb on + strandat 1783.582 kb on + strand, within MPMX26_01727at 1783.658 kb on + strand, within MPMX26_01727at 1783.666 kb on + strand, within MPMX26_01727at 1783.687 kb on + strand, within MPMX26_01727at 1783.797 kb on + strand, within MPMX26_01727at 1783.867 kb on + strand, within MPMX26_01727at 1783.883 kb on + strand, within MPMX26_01727at 1783.888 kb on + strand, within MPMX26_01727at 1783.888 kb on + strand, within MPMX26_01727at 1783.888 kb on + strand, within MPMX26_01727at 1783.888 kb on + strand, within MPMX26_01727at 1783.888 kb on + strand, within MPMX26_01727at 1783.889 kb on + strand, within MPMX26_01727at 1783.894 kb on + strand, within MPMX26_01727at 1783.894 kb on + strand, within MPMX26_01727at 1783.894 kb on + strand, within MPMX26_01727at 1783.894 kb on + strand, within MPMX26_01727at 1783.894 kb on + strand, within MPMX26_01727at 1783.894 kb on + strand, within MPMX26_01727at 1783.894 kb on + strand, within MPMX26_01727at 1783.896 kb on + strand, within MPMX26_01727at 1783.896 kb on + strand, within MPMX26_01727at 1783.896 kb on + strand, within MPMX26_01727at 1783.904 kb on + strand, within MPMX26_01727at 1783.909 kb on + strand, within MPMX26_01727at 1783.909 kb on + strand, within MPMX26_01727at 1783.925 kb on + strand, within MPMX26_01727at 1783.926 kb on + strand, within MPMX26_01727at 1783.977 kb on + strand, within MPMX26_01727at 1784.001 kb on + strandat 1784.008 kb on + strandat 1784.053 kb on + strandat 1784.053 kb on + strandat 1784.975 kb on + strand, within MPMX26_01729at 1785.029 kb on + strand, within MPMX26_01729

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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1,783,461 + +0.6
1,783,519 + -0.2
1,783,582 + MPMX26_01727 0.10 -1.0
1,783,658 + MPMX26_01727 0.25 -0.7
1,783,666 + MPMX26_01727 0.27 -2.1
1,783,687 + MPMX26_01727 0.31 +0.0
1,783,797 + MPMX26_01727 0.53 -0.2
1,783,867 + MPMX26_01727 0.66 -0.8
1,783,883 + MPMX26_01727 0.69 -0.0
1,783,888 + MPMX26_01727 0.70 +0.0
1,783,888 + MPMX26_01727 0.70 -1.6
1,783,888 + MPMX26_01727 0.70 +0.1
1,783,888 + MPMX26_01727 0.70 -1.3
1,783,888 + MPMX26_01727 0.70 -1.0
1,783,889 + MPMX26_01727 0.71 -0.1
1,783,894 + MPMX26_01727 0.72 -1.4
1,783,894 + MPMX26_01727 0.72 -0.6
1,783,894 + MPMX26_01727 0.72 +0.0
1,783,894 + MPMX26_01727 0.72 -0.1
1,783,894 + MPMX26_01727 0.72 -1.4
1,783,894 + MPMX26_01727 0.72 -1.9
1,783,894 + MPMX26_01727 0.72 -2.0
1,783,896 + MPMX26_01727 0.72 -1.0
1,783,896 + MPMX26_01727 0.72 -0.3
1,783,896 + MPMX26_01727 0.72 +0.3
1,783,904 + MPMX26_01727 0.74 -1.2
1,783,909 + MPMX26_01727 0.75 -1.6
1,783,909 + MPMX26_01727 0.75 -0.5
1,783,925 + MPMX26_01727 0.78 -1.6
1,783,926 + MPMX26_01727 0.78 -0.8
1,783,977 + MPMX26_01727 0.88 +0.1
1,784,001 + -2.4
1,784,008 + -0.4
1,784,053 + -0.1
1,784,053 + -0.8
1,784,975 + MPMX26_01729 0.12 -0.3
1,785,029 + MPMX26_01729 0.20 +0.6

Or see this region's nucleotide sequence