Experiment: UV exposure at 150J/m2 for 20 seconds
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01654 and MPMX26_01655 are separated by 142 nucleotides MPMX26_01655 and MPMX26_01656 are separated by 286 nucleotides MPMX26_01656 and MPMX26_01657 are separated by 332 nucleotides MPMX26_01657 and MPMX26_01658 are separated by 28 nucleotides
MPMX26_01654: MPMX26_01654 - hypothetical protein, at 1,713,064 to 1,713,210
_01654
MPMX26_01655: MPMX26_01655 - hypothetical protein, at 1,713,353 to 1,713,751
_01655
MPMX26_01656: MPMX26_01656 - hypothetical protein, at 1,714,038 to 1,714,451
_01656
MPMX26_01657: MPMX26_01657 - hypothetical protein, at 1,714,784 to 1,715,092
_01657
MPMX26_01658: MPMX26_01658 - hypothetical protein, at 1,715,121 to 1,715,507
_01658
Position (kb) 1714
1715 Strain fitness (log2 ratio) -1
0
1 at 1713.955 kb on - strand at 1713.986 kb on + strand at 1714.109 kb on - strand, within MPMX26_01656 at 1714.109 kb on - strand, within MPMX26_01656 at 1714.110 kb on - strand, within MPMX26_01656 at 1714.176 kb on - strand, within MPMX26_01656 at 1714.205 kb on - strand, within MPMX26_01656 at 1714.221 kb on - strand, within MPMX26_01656 at 1714.301 kb on - strand, within MPMX26_01656 at 1714.311 kb on - strand, within MPMX26_01656 at 1714.379 kb on - strand, within MPMX26_01656 at 1714.379 kb on - strand, within MPMX26_01656 at 1714.379 kb on - strand, within MPMX26_01656 at 1715.376 kb on - strand, within MPMX26_01658
Per-strain Table
Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds remove 1,713,955 - +0.3 1,713,986 + -0.4 1,714,109 - MPMX26_01656 0.17 -0.1 1,714,109 - MPMX26_01656 0.17 -0.4 1,714,110 - MPMX26_01656 0.17 +0.8 1,714,176 - MPMX26_01656 0.33 -0.4 1,714,205 - MPMX26_01656 0.40 -0.6 1,714,221 - MPMX26_01656 0.44 -0.9 1,714,301 - MPMX26_01656 0.64 -0.1 1,714,311 - MPMX26_01656 0.66 -0.1 1,714,379 - MPMX26_01656 0.82 -0.8 1,714,379 - MPMX26_01656 0.82 +0.4 1,714,379 - MPMX26_01656 0.82 -1.3 1,715,376 - MPMX26_01658 0.66 -0.2
Or see this region's nucleotide sequence