Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01540

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01537 and MPMX26_01538 are separated by 151 nucleotidesMPMX26_01538 and MPMX26_01539 are separated by 5 nucleotidesMPMX26_01539 and MPMX26_01540 are separated by 4 nucleotidesMPMX26_01540 and MPMX26_01541 are separated by 158 nucleotidesMPMX26_01541 and MPMX26_01542 are separated by 11 nucleotides MPMX26_01537: MPMX26_01537 - hypothetical protein, at 1,594,053 to 1,595,321 _01537 MPMX26_01538: MPMX26_01538 - hypothetical protein, at 1,595,473 to 1,595,727 _01538 MPMX26_01539: MPMX26_01539 - hypothetical protein, at 1,595,733 to 1,595,924 _01539 MPMX26_01540: MPMX26_01540 - hypothetical protein, at 1,595,929 to 1,596,240 _01540 MPMX26_01541: MPMX26_01541 - hypothetical protein, at 1,596,399 to 1,596,734 _01541 MPMX26_01542: MPMX26_01542 - hypothetical protein, at 1,596,746 to 1,597,966 _01542 Position (kb) 1595 1596 1597Strain fitness (log2 ratio) -1 0 1at 1596.063 kb on + strand, within MPMX26_01540at 1596.255 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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1,596,063 + MPMX26_01540 0.43 -1.2
1,596,255 - -0.9

Or see this region's nucleotide sequence