Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01503

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01502 and MPMX26_01503 are separated by 26 nucleotidesMPMX26_01503 and MPMX26_01504 overlap by 8 nucleotides MPMX26_01502: MPMX26_01502 - NADH:quinone reductase, at 1,562,088 to 1,563,074 _01502 MPMX26_01503: MPMX26_01503 - hypothetical protein, at 1,563,101 to 1,563,379 _01503 MPMX26_01504: MPMX26_01504 - hypothetical protein, at 1,563,372 to 1,564,676 _01504 Position (kb) 1563 1564Strain fitness (log2 ratio) -2 -1 0 1at 1562.148 kb on + strandat 1562.528 kb on - strand, within MPMX26_01502at 1563.033 kb on + strandat 1563.244 kb on - strand, within MPMX26_01503at 1563.250 kb on - strand, within MPMX26_01503at 1563.250 kb on - strand, within MPMX26_01503at 1563.277 kb on - strand, within MPMX26_01503at 1563.312 kb on - strand, within MPMX26_01503at 1563.312 kb on - strand, within MPMX26_01503at 1563.312 kb on - strand, within MPMX26_01503at 1563.312 kb on - strand, within MPMX26_01503at 1563.312 kb on - strand, within MPMX26_01503at 1563.340 kb on - strand, within MPMX26_01503at 1563.351 kb on - strand, within MPMX26_01503at 1563.377 kb on - strandat 1563.472 kb on - strandat 1563.512 kb on - strand, within MPMX26_01504at 1563.512 kb on - strand, within MPMX26_01504at 1563.517 kb on - strand, within MPMX26_01504at 1563.517 kb on - strand, within MPMX26_01504at 1563.517 kb on - strand, within MPMX26_01504at 1563.528 kb on - strand, within MPMX26_01504at 1563.528 kb on - strand, within MPMX26_01504at 1563.533 kb on - strand, within MPMX26_01504at 1563.533 kb on - strand, within MPMX26_01504at 1563.545 kb on - strand, within MPMX26_01504at 1563.547 kb on - strand, within MPMX26_01504at 1563.581 kb on - strand, within MPMX26_01504at 1563.584 kb on - strand, within MPMX26_01504at 1563.591 kb on - strand, within MPMX26_01504at 1563.601 kb on - strand, within MPMX26_01504at 1563.620 kb on - strand, within MPMX26_01504at 1563.624 kb on - strand, within MPMX26_01504at 1563.685 kb on - strand, within MPMX26_01504at 1563.685 kb on - strand, within MPMX26_01504at 1563.704 kb on - strand, within MPMX26_01504at 1563.704 kb on - strand, within MPMX26_01504at 1563.709 kb on - strand, within MPMX26_01504at 1563.802 kb on - strand, within MPMX26_01504at 1563.809 kb on - strand, within MPMX26_01504at 1563.809 kb on - strand, within MPMX26_01504at 1563.809 kb on - strand, within MPMX26_01504at 1563.809 kb on - strand, within MPMX26_01504at 1563.809 kb on - strand, within MPMX26_01504at 1563.809 kb on - strand, within MPMX26_01504at 1563.847 kb on - strand, within MPMX26_01504at 1563.847 kb on - strand, within MPMX26_01504at 1563.853 kb on - strand, within MPMX26_01504at 1563.853 kb on - strand, within MPMX26_01504at 1563.853 kb on - strand, within MPMX26_01504at 1563.903 kb on - strand, within MPMX26_01504at 1563.959 kb on - strand, within MPMX26_01504at 1563.991 kb on - strand, within MPMX26_01504at 1563.991 kb on - strand, within MPMX26_01504at 1563.991 kb on - strand, within MPMX26_01504at 1564.016 kb on - strand, within MPMX26_01504at 1564.085 kb on - strand, within MPMX26_01504at 1564.085 kb on - strand, within MPMX26_01504at 1564.085 kb on - strand, within MPMX26_01504at 1564.085 kb on - strand, within MPMX26_01504at 1564.085 kb on - strand, within MPMX26_01504at 1564.085 kb on - strand, within MPMX26_01504at 1564.112 kb on - strand, within MPMX26_01504at 1564.112 kb on - strand, within MPMX26_01504at 1564.112 kb on - strand, within MPMX26_01504at 1564.113 kb on - strand, within MPMX26_01504at 1564.113 kb on - strand, within MPMX26_01504at 1564.113 kb on - strand, within MPMX26_01504at 1564.122 kb on - strand, within MPMX26_01504at 1564.158 kb on - strand, within MPMX26_01504at 1564.159 kb on - strand, within MPMX26_01504at 1564.194 kb on - strand, within MPMX26_01504at 1564.204 kb on - strand, within MPMX26_01504at 1564.204 kb on - strand, within MPMX26_01504at 1564.204 kb on - strand, within MPMX26_01504at 1564.261 kb on - strand, within MPMX26_01504at 1564.261 kb on - strand, within MPMX26_01504at 1564.261 kb on - strand, within MPMX26_01504at 1564.261 kb on - strand, within MPMX26_01504at 1564.261 kb on - strand, within MPMX26_01504at 1564.261 kb on - strand, within MPMX26_01504at 1564.261 kb on - strand, within MPMX26_01504at 1564.261 kb on - strand, within MPMX26_01504at 1564.261 kb on - strand, within MPMX26_01504at 1564.261 kb on - strand, within MPMX26_01504at 1564.261 kb on - strand, within MPMX26_01504at 1564.261 kb on - strand, within MPMX26_01504at 1564.261 kb on - strand, within MPMX26_01504at 1564.262 kb on - strand, within MPMX26_01504at 1564.291 kb on - strand, within MPMX26_01504at 1564.307 kb on - strand, within MPMX26_01504

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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1,562,148 + +0.3
1,562,528 - MPMX26_01502 0.45 +0.6
1,563,033 + +0.3
1,563,244 - MPMX26_01503 0.51 -2.2
1,563,250 - MPMX26_01503 0.53 -1.2
1,563,250 - MPMX26_01503 0.53 +0.9
1,563,277 - MPMX26_01503 0.63 -1.4
1,563,312 - MPMX26_01503 0.76 -0.3
1,563,312 - MPMX26_01503 0.76 -0.5
1,563,312 - MPMX26_01503 0.76 +0.6
1,563,312 - MPMX26_01503 0.76 +0.0
1,563,312 - MPMX26_01503 0.76 -0.1
1,563,340 - MPMX26_01503 0.86 -0.4
1,563,351 - MPMX26_01503 0.90 -1.4
1,563,377 - -1.7
1,563,472 - -0.8
1,563,512 - MPMX26_01504 0.11 +0.1
1,563,512 - MPMX26_01504 0.11 -0.0
1,563,517 - MPMX26_01504 0.11 +0.1
1,563,517 - MPMX26_01504 0.11 -0.4
1,563,517 - MPMX26_01504 0.11 -0.1
1,563,528 - MPMX26_01504 0.12 +0.2
1,563,528 - MPMX26_01504 0.12 +0.1
1,563,533 - MPMX26_01504 0.12 +0.6
1,563,533 - MPMX26_01504 0.12 -0.0
1,563,545 - MPMX26_01504 0.13 +0.4
1,563,547 - MPMX26_01504 0.13 -0.4
1,563,581 - MPMX26_01504 0.16 +0.2
1,563,584 - MPMX26_01504 0.16 -0.5
1,563,591 - MPMX26_01504 0.17 +0.3
1,563,601 - MPMX26_01504 0.18 +0.1
1,563,620 - MPMX26_01504 0.19 +0.3
1,563,624 - MPMX26_01504 0.19 +0.8
1,563,685 - MPMX26_01504 0.24 -0.0
1,563,685 - MPMX26_01504 0.24 +0.1
1,563,704 - MPMX26_01504 0.25 +0.2
1,563,704 - MPMX26_01504 0.25 -0.3
1,563,709 - MPMX26_01504 0.26 +0.5
1,563,802 - MPMX26_01504 0.33 +0.4
1,563,809 - MPMX26_01504 0.33 -0.2
1,563,809 - MPMX26_01504 0.33 +0.5
1,563,809 - MPMX26_01504 0.33 -0.2
1,563,809 - MPMX26_01504 0.33 -0.4
1,563,809 - MPMX26_01504 0.33 +0.6
1,563,809 - MPMX26_01504 0.33 +0.2
1,563,847 - MPMX26_01504 0.36 +0.1
1,563,847 - MPMX26_01504 0.36 -0.3
1,563,853 - MPMX26_01504 0.37 +0.3
1,563,853 - MPMX26_01504 0.37 -0.2
1,563,853 - MPMX26_01504 0.37 -0.1
1,563,903 - MPMX26_01504 0.41 -0.3
1,563,959 - MPMX26_01504 0.45 +0.0
1,563,991 - MPMX26_01504 0.47 -0.6
1,563,991 - MPMX26_01504 0.47 +0.0
1,563,991 - MPMX26_01504 0.47 +0.4
1,564,016 - MPMX26_01504 0.49 -0.1
1,564,085 - MPMX26_01504 0.55 -0.2
1,564,085 - MPMX26_01504 0.55 +0.3
1,564,085 - MPMX26_01504 0.55 +0.2
1,564,085 - MPMX26_01504 0.55 +1.0
1,564,085 - MPMX26_01504 0.55 -0.0
1,564,085 - MPMX26_01504 0.55 +0.2
1,564,112 - MPMX26_01504 0.57 -0.6
1,564,112 - MPMX26_01504 0.57 +0.9
1,564,112 - MPMX26_01504 0.57 +0.1
1,564,113 - MPMX26_01504 0.57 +0.6
1,564,113 - MPMX26_01504 0.57 +0.3
1,564,113 - MPMX26_01504 0.57 -0.3
1,564,122 - MPMX26_01504 0.57 -0.1
1,564,158 - MPMX26_01504 0.60 +0.1
1,564,159 - MPMX26_01504 0.60 -0.7
1,564,194 - MPMX26_01504 0.63 +0.4
1,564,204 - MPMX26_01504 0.64 +0.3
1,564,204 - MPMX26_01504 0.64 +0.3
1,564,204 - MPMX26_01504 0.64 +0.3
1,564,261 - MPMX26_01504 0.68 +0.0
1,564,261 - MPMX26_01504 0.68 +0.0
1,564,261 - MPMX26_01504 0.68 +0.0
1,564,261 - MPMX26_01504 0.68 +0.6
1,564,261 - MPMX26_01504 0.68 -0.4
1,564,261 - MPMX26_01504 0.68 -0.2
1,564,261 - MPMX26_01504 0.68 -0.1
1,564,261 - MPMX26_01504 0.68 -0.1
1,564,261 - MPMX26_01504 0.68 -0.2
1,564,261 - MPMX26_01504 0.68 -0.0
1,564,261 - MPMX26_01504 0.68 +0.2
1,564,261 - MPMX26_01504 0.68 +0.5
1,564,261 - MPMX26_01504 0.68 -0.1
1,564,262 - MPMX26_01504 0.68 +0.4
1,564,291 - MPMX26_01504 0.70 -0.3
1,564,307 - MPMX26_01504 0.72 +0.0

Or see this region's nucleotide sequence