Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01488

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01487 and MPMX26_01488 are separated by 375 nucleotidesMPMX26_01488 and MPMX26_01489 are separated by 297 nucleotides MPMX26_01487: MPMX26_01487 - hypothetical protein, at 1,544,617 to 1,545,561 _01487 MPMX26_01488: MPMX26_01488 - hypothetical protein, at 1,545,937 to 1,546,155 _01488 MPMX26_01489: MPMX26_01489 - Miniconductance mechanosensitive channel YbdG, at 1,546,453 to 1,547,739 _01489 Position (kb) 1545 1546 1547Strain fitness (log2 ratio) -1 0 1at 1545.513 kb on - strandat 1546.062 kb on + strand, within MPMX26_01488

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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1,545,513 - -0.2
1,546,062 + MPMX26_01488 0.57 -0.9

Or see this region's nucleotide sequence