Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01456

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01455 and MPMX26_01456 are separated by 16 nucleotidesMPMX26_01456 and MPMX26_01457 are separated by 138 nucleotidesMPMX26_01457 and MPMX26_01458 overlap by 8 nucleotides MPMX26_01455: MPMX26_01455 - Cytochrome bd-I ubiquinol oxidase subunit 2, at 1,507,094 to 1,508,098 _01455 MPMX26_01456: MPMX26_01456 - hypothetical protein, at 1,508,115 to 1,508,222 _01456 MPMX26_01457: MPMX26_01457 - hypothetical protein, at 1,508,361 to 1,509,173 _01457 MPMX26_01458: MPMX26_01458 - hypothetical protein, at 1,509,166 to 1,509,315 _01458 Position (kb) 1508 1509Strain fitness (log2 ratio) -1 0 1at 1507.274 kb on + strand, within MPMX26_01455at 1508.147 kb on + strand, within MPMX26_01456

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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1,507,274 + MPMX26_01455 0.18 +0.1
1,508,147 + MPMX26_01456 0.30 -0.8

Or see this region's nucleotide sequence