Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01446

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01445 and MPMX26_01446 are separated by 120 nucleotides MPMX26_01445: MPMX26_01445 - UDP-glucose 4-epimerase, at 1,495,830 to 1,496,837 _01445 MPMX26_01446: MPMX26_01446 - Fumarate hydratase class II, at 1,496,958 to 1,498,352 _01446 Position (kb) 1496 1497 1498 1499Strain fitness (log2 ratio) -1 0 1at 1496.162 kb on + strand, within MPMX26_01445at 1497.615 kb on + strand, within MPMX26_01446at 1497.650 kb on + strand, within MPMX26_01446at 1498.136 kb on - strand, within MPMX26_01446at 1498.818 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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1,496,162 + MPMX26_01445 0.33 +0.8
1,497,615 + MPMX26_01446 0.47 +0.6
1,497,650 + MPMX26_01446 0.50 +0.1
1,498,136 - MPMX26_01446 0.84 -0.5
1,498,818 + +0.1

Or see this region's nucleotide sequence