Experiment: UV exposure at 150J/m2 for 20 seconds
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01306 and MPMX26_01307 are separated by 444 nucleotides MPMX26_01307 and MPMX26_01308 are separated by 53 nucleotides MPMX26_01308 and MPMX26_01309 are separated by 148 nucleotides MPMX26_01309 and MPMX26_01310 overlap by 17 nucleotides
MPMX26_01306: MPMX26_01306 - Cell division coordinator CpoB, at 1,382,788 to 1,383,612
_01306
MPMX26_01307: MPMX26_01307 - Regulatory protein RecX, at 1,384,057 to 1,384,542
_01307
MPMX26_01308: MPMX26_01308 - Protein RecA, at 1,384,596 to 1,385,642
_01308
MPMX26_01309: MPMX26_01309 - Heat shock protein 15, at 1,385,791 to 1,386,231
_01309
MPMX26_01310: MPMX26_01310 - GMP/IMP nucleotidase YrfG, at 1,386,215 to 1,386,901
_01310
Position (kb)
1384
1385
1386 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1384.054 kb on + strand at 1384.054 kb on + strand at 1384.137 kb on + strand, within MPMX26_01307 at 1384.619 kb on - strand at 1384.668 kb on - strand at 1384.668 kb on - strand at 1384.668 kb on - strand at 1384.668 kb on - strand at 1384.668 kb on - strand at 1384.668 kb on - strand at 1384.683 kb on - strand at 1384.745 kb on - strand, within MPMX26_01308 at 1384.902 kb on - strand, within MPMX26_01308 at 1384.956 kb on - strand, within MPMX26_01308 at 1384.956 kb on - strand, within MPMX26_01308 at 1385.025 kb on - strand, within MPMX26_01308 at 1385.088 kb on - strand, within MPMX26_01308 at 1385.121 kb on - strand, within MPMX26_01308 at 1385.131 kb on - strand, within MPMX26_01308 at 1385.131 kb on - strand, within MPMX26_01308 at 1385.204 kb on - strand, within MPMX26_01308 at 1385.204 kb on - strand, within MPMX26_01308 at 1385.204 kb on - strand, within MPMX26_01308 at 1385.244 kb on - strand, within MPMX26_01308 at 1385.333 kb on - strand, within MPMX26_01308 at 1385.400 kb on - strand, within MPMX26_01308 at 1385.435 kb on - strand, within MPMX26_01308 at 1385.435 kb on - strand, within MPMX26_01308 at 1385.454 kb on - strand, within MPMX26_01308 at 1385.528 kb on - strand, within MPMX26_01308 at 1385.815 kb on - strand at 1385.979 kb on - strand, within MPMX26_01309 at 1386.042 kb on - strand, within MPMX26_01309 at 1386.042 kb on - strand, within MPMX26_01309 at 1386.042 kb on - strand, within MPMX26_01309 at 1386.060 kb on - strand, within MPMX26_01309 at 1386.130 kb on - strand, within MPMX26_01309 at 1386.178 kb on - strand, within MPMX26_01309 at 1386.178 kb on - strand, within MPMX26_01309 at 1386.178 kb on - strand, within MPMX26_01309 at 1386.178 kb on - strand, within MPMX26_01309
Per-strain Table
Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds remove 1,384,054 + -0.5 1,384,054 + +0.3 1,384,137 + MPMX26_01307 0.16 -0.7 1,384,619 - +0.3 1,384,668 - +0.3 1,384,668 - -0.3 1,384,668 - -0.5 1,384,668 - +0.2 1,384,668 - +0.3 1,384,668 - -1.0 1,384,683 - -0.0 1,384,745 - MPMX26_01308 0.14 -1.4 1,384,902 - MPMX26_01308 0.29 +0.1 1,384,956 - MPMX26_01308 0.34 +0.1 1,384,956 - MPMX26_01308 0.34 -1.5 1,385,025 - MPMX26_01308 0.41 -2.3 1,385,088 - MPMX26_01308 0.47 +0.1 1,385,121 - MPMX26_01308 0.50 -0.9 1,385,131 - MPMX26_01308 0.51 -0.7 1,385,131 - MPMX26_01308 0.51 -2.8 1,385,204 - MPMX26_01308 0.58 -1.2 1,385,204 - MPMX26_01308 0.58 -0.9 1,385,204 - MPMX26_01308 0.58 -0.9 1,385,244 - MPMX26_01308 0.62 -0.2 1,385,333 - MPMX26_01308 0.70 +2.0 1,385,400 - MPMX26_01308 0.77 -0.4 1,385,435 - MPMX26_01308 0.80 -1.2 1,385,435 - MPMX26_01308 0.80 -0.4 1,385,454 - MPMX26_01308 0.82 +0.6 1,385,528 - MPMX26_01308 0.89 -0.4 1,385,815 - +0.8 1,385,979 - MPMX26_01309 0.43 -0.7 1,386,042 - MPMX26_01309 0.57 +0.2 1,386,042 - MPMX26_01309 0.57 +0.0 1,386,042 - MPMX26_01309 0.57 +1.2 1,386,060 - MPMX26_01309 0.61 -0.5 1,386,130 - MPMX26_01309 0.77 -0.8 1,386,178 - MPMX26_01309 0.88 -0.2 1,386,178 - MPMX26_01309 0.88 -0.6 1,386,178 - MPMX26_01309 0.88 -2.1 1,386,178 - MPMX26_01309 0.88 +0.7
Or see this region's nucleotide sequence