Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01287

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01285 and MPMX26_01286 are separated by 35 nucleotidesMPMX26_01286 and MPMX26_01287 are separated by 94 nucleotidesMPMX26_01287 and MPMX26_01288 are separated by 103 nucleotides MPMX26_01285: MPMX26_01285 - hypothetical protein, at 1,361,660 to 1,362,013 _01285 MPMX26_01286: MPMX26_01286 - hypothetical protein, at 1,362,049 to 1,362,516 _01286 MPMX26_01287: MPMX26_01287 - Ornithine carbamoyltransferase 1, anabolic, at 1,362,611 to 1,363,531 _01287 MPMX26_01288: MPMX26_01288 - hypothetical protein, at 1,363,635 to 1,364,213 _01288 Position (kb) 1362 1363 1364Strain fitness (log2 ratio) -3 -2 -1 0 1at 1361.617 kb on + strandat 1361.617 kb on + strandat 1362.617 kb on - strandat 1362.617 kb on - strandat 1362.617 kb on - strandat 1362.617 kb on - strandat 1362.697 kb on - strandat 1362.753 kb on - strand, within MPMX26_01287at 1362.758 kb on - strand, within MPMX26_01287at 1362.758 kb on - strand, within MPMX26_01287at 1362.758 kb on - strand, within MPMX26_01287at 1362.758 kb on - strand, within MPMX26_01287at 1362.758 kb on - strand, within MPMX26_01287at 1362.758 kb on - strand, within MPMX26_01287at 1362.781 kb on - strand, within MPMX26_01287at 1362.781 kb on - strand, within MPMX26_01287at 1362.781 kb on - strand, within MPMX26_01287at 1362.781 kb on - strand, within MPMX26_01287at 1362.789 kb on - strand, within MPMX26_01287at 1362.815 kb on - strand, within MPMX26_01287at 1362.837 kb on - strand, within MPMX26_01287at 1362.864 kb on - strand, within MPMX26_01287at 1362.874 kb on - strand, within MPMX26_01287at 1362.874 kb on - strand, within MPMX26_01287at 1362.882 kb on - strand, within MPMX26_01287at 1362.887 kb on - strand, within MPMX26_01287at 1362.918 kb on - strand, within MPMX26_01287at 1362.928 kb on - strand, within MPMX26_01287at 1362.928 kb on - strand, within MPMX26_01287at 1362.928 kb on - strand, within MPMX26_01287at 1362.936 kb on - strand, within MPMX26_01287at 1362.936 kb on - strand, within MPMX26_01287at 1362.978 kb on - strand, within MPMX26_01287at 1362.978 kb on - strand, within MPMX26_01287at 1362.978 kb on - strand, within MPMX26_01287at 1363.021 kb on - strand, within MPMX26_01287at 1363.037 kb on - strand, within MPMX26_01287at 1363.037 kb on - strand, within MPMX26_01287at 1363.043 kb on - strand, within MPMX26_01287at 1363.107 kb on - strand, within MPMX26_01287at 1363.107 kb on - strand, within MPMX26_01287at 1363.144 kb on - strand, within MPMX26_01287at 1363.213 kb on - strand, within MPMX26_01287at 1363.231 kb on - strand, within MPMX26_01287at 1363.231 kb on - strand, within MPMX26_01287at 1363.257 kb on - strand, within MPMX26_01287at 1363.273 kb on - strand, within MPMX26_01287at 1363.273 kb on - strand, within MPMX26_01287at 1363.273 kb on - strand, within MPMX26_01287at 1363.273 kb on - strand, within MPMX26_01287at 1363.273 kb on - strand, within MPMX26_01287at 1363.273 kb on - strand, within MPMX26_01287at 1363.292 kb on - strand, within MPMX26_01287at 1363.310 kb on - strand, within MPMX26_01287at 1363.334 kb on - strand, within MPMX26_01287at 1363.344 kb on - strand, within MPMX26_01287at 1363.371 kb on - strand, within MPMX26_01287at 1363.371 kb on - strand, within MPMX26_01287at 1363.371 kb on - strand, within MPMX26_01287at 1363.423 kb on - strand, within MPMX26_01287at 1363.441 kb on - strandat 1363.535 kb on - strandat 1363.800 kb on - strand, within MPMX26_01288at 1363.853 kb on - strand, within MPMX26_01288at 1363.902 kb on - strand, within MPMX26_01288at 1363.902 kb on - strand, within MPMX26_01288at 1363.902 kb on - strand, within MPMX26_01288at 1363.902 kb on - strand, within MPMX26_01288at 1363.902 kb on - strand, within MPMX26_01288at 1363.902 kb on - strand, within MPMX26_01288at 1363.902 kb on - strand, within MPMX26_01288at 1363.902 kb on - strand, within MPMX26_01288at 1363.902 kb on - strand, within MPMX26_01288at 1363.902 kb on - strand, within MPMX26_01288at 1363.902 kb on - strand, within MPMX26_01288at 1363.913 kb on - strand, within MPMX26_01288

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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1,361,617 + -0.6
1,361,617 + -0.2
1,362,617 - +0.5
1,362,617 - +0.4
1,362,617 - +0.8
1,362,617 - +1.0
1,362,697 - -0.8
1,362,753 - MPMX26_01287 0.15 +0.5
1,362,758 - MPMX26_01287 0.16 -0.3
1,362,758 - MPMX26_01287 0.16 -1.1
1,362,758 - MPMX26_01287 0.16 -1.5
1,362,758 - MPMX26_01287 0.16 -0.7
1,362,758 - MPMX26_01287 0.16 -1.7
1,362,758 - MPMX26_01287 0.16 -1.3
1,362,781 - MPMX26_01287 0.18 +0.2
1,362,781 - MPMX26_01287 0.18 -0.7
1,362,781 - MPMX26_01287 0.18 -0.9
1,362,781 - MPMX26_01287 0.18 -1.7
1,362,789 - MPMX26_01287 0.19 +0.4
1,362,815 - MPMX26_01287 0.22 -0.8
1,362,837 - MPMX26_01287 0.25 -0.9
1,362,864 - MPMX26_01287 0.27 -0.1
1,362,874 - MPMX26_01287 0.29 -1.7
1,362,874 - MPMX26_01287 0.29 -0.9
1,362,882 - MPMX26_01287 0.29 -0.2
1,362,887 - MPMX26_01287 0.30 -2.2
1,362,918 - MPMX26_01287 0.33 -1.3
1,362,928 - MPMX26_01287 0.34 -1.9
1,362,928 - MPMX26_01287 0.34 -0.9
1,362,928 - MPMX26_01287 0.34 -2.2
1,362,936 - MPMX26_01287 0.35 -1.8
1,362,936 - MPMX26_01287 0.35 +0.7
1,362,978 - MPMX26_01287 0.40 -0.7
1,362,978 - MPMX26_01287 0.40 -1.9
1,362,978 - MPMX26_01287 0.40 -1.3
1,363,021 - MPMX26_01287 0.45 -2.6
1,363,037 - MPMX26_01287 0.46 -1.7
1,363,037 - MPMX26_01287 0.46 +1.1
1,363,043 - MPMX26_01287 0.47 -1.0
1,363,107 - MPMX26_01287 0.54 -1.3
1,363,107 - MPMX26_01287 0.54 -0.9
1,363,144 - MPMX26_01287 0.58 -0.2
1,363,213 - MPMX26_01287 0.65 -1.6
1,363,231 - MPMX26_01287 0.67 -1.3
1,363,231 - MPMX26_01287 0.67 -0.7
1,363,257 - MPMX26_01287 0.70 +0.2
1,363,273 - MPMX26_01287 0.72 -0.4
1,363,273 - MPMX26_01287 0.72 -0.7
1,363,273 - MPMX26_01287 0.72 -0.9
1,363,273 - MPMX26_01287 0.72 -0.8
1,363,273 - MPMX26_01287 0.72 -0.7
1,363,273 - MPMX26_01287 0.72 -2.2
1,363,292 - MPMX26_01287 0.74 -0.7
1,363,310 - MPMX26_01287 0.76 -0.7
1,363,334 - MPMX26_01287 0.79 -1.2
1,363,344 - MPMX26_01287 0.80 -3.3
1,363,371 - MPMX26_01287 0.83 -1.4
1,363,371 - MPMX26_01287 0.83 -0.9
1,363,371 - MPMX26_01287 0.83 -0.2
1,363,423 - MPMX26_01287 0.88 -1.1
1,363,441 - -0.3
1,363,535 - -0.8
1,363,800 - MPMX26_01288 0.28 -0.6
1,363,853 - MPMX26_01288 0.38 -0.3
1,363,902 - MPMX26_01288 0.46 -0.3
1,363,902 - MPMX26_01288 0.46 +1.4
1,363,902 - MPMX26_01288 0.46 +0.4
1,363,902 - MPMX26_01288 0.46 -0.7
1,363,902 - MPMX26_01288 0.46 -2.5
1,363,902 - MPMX26_01288 0.46 -0.5
1,363,902 - MPMX26_01288 0.46 +0.5
1,363,902 - MPMX26_01288 0.46 -0.5
1,363,902 - MPMX26_01288 0.46 +0.7
1,363,902 - MPMX26_01288 0.46 +0.4
1,363,902 - MPMX26_01288 0.46 +0.5
1,363,913 - MPMX26_01288 0.48 -0.2

Or see this region's nucleotide sequence