Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01246

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01245 and MPMX26_01246 are separated by 87 nucleotidesMPMX26_01246 and MPMX26_01247 are separated by 360 nucleotides MPMX26_01245: MPMX26_01245 - putative HTH-type transcriptional regulator, at 1,314,656 to 1,315,663 _01245 MPMX26_01246: MPMX26_01246 - Cell division protein ZapE, at 1,315,751 to 1,316,887 _01246 MPMX26_01247: MPMX26_01247 - Malate synthase G, at 1,317,248 to 1,319,413 _01247 Position (kb) 1315 1316 1317Strain fitness (log2 ratio) -2 -1 0 1at 1314.779 kb on + strand, within MPMX26_01245at 1314.779 kb on + strand, within MPMX26_01245at 1314.826 kb on + strand, within MPMX26_01245at 1314.847 kb on + strand, within MPMX26_01245at 1314.854 kb on + strand, within MPMX26_01245at 1314.859 kb on + strand, within MPMX26_01245at 1314.859 kb on + strand, within MPMX26_01245at 1314.884 kb on + strand, within MPMX26_01245at 1314.916 kb on + strand, within MPMX26_01245at 1314.942 kb on + strand, within MPMX26_01245at 1314.952 kb on + strand, within MPMX26_01245at 1314.967 kb on + strand, within MPMX26_01245at 1314.974 kb on + strand, within MPMX26_01245at 1314.975 kb on + strand, within MPMX26_01245at 1315.120 kb on + strand, within MPMX26_01245at 1315.120 kb on + strand, within MPMX26_01245at 1315.203 kb on + strand, within MPMX26_01245at 1315.208 kb on + strand, within MPMX26_01245at 1315.208 kb on + strand, within MPMX26_01245at 1315.208 kb on + strand, within MPMX26_01245at 1315.208 kb on + strand, within MPMX26_01245at 1315.208 kb on + strand, within MPMX26_01245at 1315.208 kb on + strand, within MPMX26_01245at 1315.310 kb on + strand, within MPMX26_01245at 1315.350 kb on + strand, within MPMX26_01245at 1315.362 kb on + strand, within MPMX26_01245at 1315.376 kb on + strand, within MPMX26_01245at 1315.376 kb on + strand, within MPMX26_01245at 1315.386 kb on + strand, within MPMX26_01245at 1315.386 kb on + strand, within MPMX26_01245at 1315.394 kb on + strand, within MPMX26_01245at 1315.420 kb on + strand, within MPMX26_01245at 1315.470 kb on + strand, within MPMX26_01245at 1315.555 kb on + strand, within MPMX26_01245at 1315.567 kb on + strandat 1315.590 kb on + strandat 1315.590 kb on + strandat 1315.639 kb on + strandat 1315.641 kb on + strandat 1315.771 kb on + strandat 1315.774 kb on + strandat 1315.795 kb on + strandat 1315.819 kb on + strandat 1315.858 kb on + strandat 1315.858 kb on + strandat 1315.858 kb on + strandat 1315.858 kb on + strandat 1315.858 kb on + strandat 1315.858 kb on + strandat 1315.858 kb on + strandat 1315.858 kb on + strandat 1315.858 kb on + strandat 1315.858 kb on + strandat 1315.858 kb on + strandat 1315.858 kb on + strandat 1315.868 kb on + strand, within MPMX26_01246at 1315.868 kb on + strand, within MPMX26_01246at 1315.868 kb on + strand, within MPMX26_01246at 1315.885 kb on + strand, within MPMX26_01246at 1315.885 kb on + strand, within MPMX26_01246at 1315.964 kb on + strand, within MPMX26_01246at 1315.964 kb on + strand, within MPMX26_01246at 1315.965 kb on + strand, within MPMX26_01246at 1315.965 kb on + strand, within MPMX26_01246at 1315.965 kb on + strand, within MPMX26_01246at 1315.965 kb on + strand, within MPMX26_01246at 1315.967 kb on + strand, within MPMX26_01246at 1315.967 kb on + strand, within MPMX26_01246at 1315.967 kb on + strand, within MPMX26_01246at 1315.978 kb on + strand, within MPMX26_01246at 1316.030 kb on + strand, within MPMX26_01246at 1316.078 kb on + strand, within MPMX26_01246at 1316.078 kb on + strand, within MPMX26_01246at 1316.078 kb on + strand, within MPMX26_01246at 1316.078 kb on + strand, within MPMX26_01246at 1316.101 kb on + strand, within MPMX26_01246at 1316.113 kb on + strand, within MPMX26_01246at 1316.113 kb on + strand, within MPMX26_01246at 1316.113 kb on + strand, within MPMX26_01246at 1316.247 kb on + strand, within MPMX26_01246at 1316.247 kb on + strand, within MPMX26_01246at 1316.247 kb on + strand, within MPMX26_01246at 1316.247 kb on + strand, within MPMX26_01246at 1316.247 kb on + strand, within MPMX26_01246at 1316.247 kb on + strand, within MPMX26_01246at 1316.257 kb on + strand, within MPMX26_01246at 1316.328 kb on + strand, within MPMX26_01246at 1316.359 kb on + strand, within MPMX26_01246at 1316.426 kb on + strand, within MPMX26_01246at 1316.456 kb on + strand, within MPMX26_01246at 1316.456 kb on + strand, within MPMX26_01246at 1316.456 kb on + strand, within MPMX26_01246at 1316.476 kb on + strand, within MPMX26_01246at 1316.544 kb on + strand, within MPMX26_01246at 1316.555 kb on + strand, within MPMX26_01246at 1316.555 kb on + strand, within MPMX26_01246at 1316.557 kb on + strand, within MPMX26_01246at 1316.578 kb on + strand, within MPMX26_01246at 1316.583 kb on + strand, within MPMX26_01246at 1316.591 kb on - strand, within MPMX26_01246at 1316.639 kb on + strand, within MPMX26_01246at 1316.644 kb on + strand, within MPMX26_01246at 1316.644 kb on + strand, within MPMX26_01246at 1316.644 kb on + strand, within MPMX26_01246at 1316.644 kb on + strand, within MPMX26_01246at 1316.644 kb on + strand, within MPMX26_01246at 1316.647 kb on + strand, within MPMX26_01246at 1316.654 kb on + strand, within MPMX26_01246at 1316.748 kb on + strand, within MPMX26_01246at 1316.748 kb on + strand, within MPMX26_01246at 1316.814 kb on + strandat 1317.244 kb on + strandat 1317.244 kb on + strandat 1317.311 kb on + strandat 1317.317 kb on + strandat 1317.332 kb on + strandat 1317.332 kb on + strandat 1317.332 kb on + strandat 1317.332 kb on + strandat 1317.332 kb on + strandat 1317.332 kb on + strandat 1317.340 kb on + strandat 1317.578 kb on + strand, within MPMX26_01247at 1317.578 kb on + strand, within MPMX26_01247at 1317.662 kb on + strand, within MPMX26_01247at 1317.706 kb on + strand, within MPMX26_01247at 1317.706 kb on + strand, within MPMX26_01247at 1317.715 kb on + strand, within MPMX26_01247at 1317.715 kb on + strand, within MPMX26_01247at 1317.715 kb on + strand, within MPMX26_01247at 1317.859 kb on + strand, within MPMX26_01247at 1317.874 kb on + strand, within MPMX26_01247

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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1,314,779 + MPMX26_01245 0.12 -0.2
1,314,779 + MPMX26_01245 0.12 +0.4
1,314,826 + MPMX26_01245 0.17 +0.2
1,314,847 + MPMX26_01245 0.19 +0.1
1,314,854 + MPMX26_01245 0.20 -0.0
1,314,859 + MPMX26_01245 0.20 +0.3
1,314,859 + MPMX26_01245 0.20 +0.2
1,314,884 + MPMX26_01245 0.23 +0.0
1,314,916 + MPMX26_01245 0.26 +0.0
1,314,942 + MPMX26_01245 0.28 +0.9
1,314,952 + MPMX26_01245 0.29 +0.3
1,314,967 + MPMX26_01245 0.31 +0.5
1,314,974 + MPMX26_01245 0.32 +0.4
1,314,975 + MPMX26_01245 0.32 -0.1
1,315,120 + MPMX26_01245 0.46 -0.1
1,315,120 + MPMX26_01245 0.46 -0.9
1,315,203 + MPMX26_01245 0.54 +0.2
1,315,208 + MPMX26_01245 0.55 +0.1
1,315,208 + MPMX26_01245 0.55 +0.2
1,315,208 + MPMX26_01245 0.55 -0.1
1,315,208 + MPMX26_01245 0.55 -0.4
1,315,208 + MPMX26_01245 0.55 +0.0
1,315,208 + MPMX26_01245 0.55 +0.5
1,315,310 + MPMX26_01245 0.65 -0.3
1,315,350 + MPMX26_01245 0.69 +0.7
1,315,362 + MPMX26_01245 0.70 +0.2
1,315,376 + MPMX26_01245 0.71 +0.6
1,315,376 + MPMX26_01245 0.71 +0.4
1,315,386 + MPMX26_01245 0.72 +0.4
1,315,386 + MPMX26_01245 0.72 -0.3
1,315,394 + MPMX26_01245 0.73 +0.2
1,315,420 + MPMX26_01245 0.76 -0.1
1,315,470 + MPMX26_01245 0.81 -0.5
1,315,555 + MPMX26_01245 0.89 +0.1
1,315,567 + +0.2
1,315,590 + -0.2
1,315,590 + +0.1
1,315,639 + -0.1
1,315,641 + -0.3
1,315,771 + +0.1
1,315,774 + -1.6
1,315,795 + +0.2
1,315,819 + -2.0
1,315,858 + -1.2
1,315,858 + -0.5
1,315,858 + -0.2
1,315,858 + +0.2
1,315,858 + -2.2
1,315,858 + -0.3
1,315,858 + -0.9
1,315,858 + -0.3
1,315,858 + -0.7
1,315,858 + +0.9
1,315,858 + -1.5
1,315,858 + +0.7
1,315,868 + MPMX26_01246 0.10 +0.7
1,315,868 + MPMX26_01246 0.10 -1.5
1,315,868 + MPMX26_01246 0.10 -0.9
1,315,885 + MPMX26_01246 0.12 -0.2
1,315,885 + MPMX26_01246 0.12 +0.2
1,315,964 + MPMX26_01246 0.19 -2.1
1,315,964 + MPMX26_01246 0.19 -1.7
1,315,965 + MPMX26_01246 0.19 -0.7
1,315,965 + MPMX26_01246 0.19 -1.3
1,315,965 + MPMX26_01246 0.19 -1.9
1,315,965 + MPMX26_01246 0.19 -1.1
1,315,967 + MPMX26_01246 0.19 -1.3
1,315,967 + MPMX26_01246 0.19 +1.1
1,315,967 + MPMX26_01246 0.19 -1.3
1,315,978 + MPMX26_01246 0.20 +0.1
1,316,030 + MPMX26_01246 0.25 -0.3
1,316,078 + MPMX26_01246 0.29 -0.7
1,316,078 + MPMX26_01246 0.29 +0.5
1,316,078 + MPMX26_01246 0.29 -0.0
1,316,078 + MPMX26_01246 0.29 +0.1
1,316,101 + MPMX26_01246 0.31 -1.1
1,316,113 + MPMX26_01246 0.32 -0.7
1,316,113 + MPMX26_01246 0.32 +0.1
1,316,113 + MPMX26_01246 0.32 -1.1
1,316,247 + MPMX26_01246 0.44 -0.3
1,316,247 + MPMX26_01246 0.44 -1.5
1,316,247 + MPMX26_01246 0.44 +0.7
1,316,247 + MPMX26_01246 0.44 -0.9
1,316,247 + MPMX26_01246 0.44 +1.7
1,316,247 + MPMX26_01246 0.44 -2.0
1,316,257 + MPMX26_01246 0.45 -0.7
1,316,328 + MPMX26_01246 0.51 -1.1
1,316,359 + MPMX26_01246 0.53 +0.1
1,316,426 + MPMX26_01246 0.59 +0.7
1,316,456 + MPMX26_01246 0.62 -1.1
1,316,456 + MPMX26_01246 0.62 -0.7
1,316,456 + MPMX26_01246 0.62 -0.7
1,316,476 + MPMX26_01246 0.64 -1.8
1,316,544 + MPMX26_01246 0.70 -1.8
1,316,555 + MPMX26_01246 0.71 -1.1
1,316,555 + MPMX26_01246 0.71 -1.7
1,316,557 + MPMX26_01246 0.71 +0.7
1,316,578 + MPMX26_01246 0.73 +0.8
1,316,583 + MPMX26_01246 0.73 +0.1
1,316,591 - MPMX26_01246 0.74 +0.7
1,316,639 + MPMX26_01246 0.78 +1.7
1,316,644 + MPMX26_01246 0.79 -0.7
1,316,644 + MPMX26_01246 0.79 -0.7
1,316,644 + MPMX26_01246 0.79 +0.7
1,316,644 + MPMX26_01246 0.79 -1.1
1,316,644 + MPMX26_01246 0.79 -1.3
1,316,647 + MPMX26_01246 0.79 -0.3
1,316,654 + MPMX26_01246 0.79 -2.1
1,316,748 + MPMX26_01246 0.88 +0.7
1,316,748 + MPMX26_01246 0.88 +0.7
1,316,814 + -2.1
1,317,244 + +0.3
1,317,244 + +0.2
1,317,311 + -0.7
1,317,317 + -0.0
1,317,332 + +0.1
1,317,332 + +0.6
1,317,332 + +0.4
1,317,332 + -0.1
1,317,332 + +0.4
1,317,332 + +1.3
1,317,340 + -0.7
1,317,578 + MPMX26_01247 0.15 -0.3
1,317,578 + MPMX26_01247 0.15 +0.8
1,317,662 + MPMX26_01247 0.19 +0.1
1,317,706 + MPMX26_01247 0.21 +0.3
1,317,706 + MPMX26_01247 0.21 -0.9
1,317,715 + MPMX26_01247 0.22 -0.2
1,317,715 + MPMX26_01247 0.22 +0.6
1,317,715 + MPMX26_01247 0.22 -0.1
1,317,859 + MPMX26_01247 0.28 +0.4
1,317,874 + MPMX26_01247 0.29 +0.5

Or see this region's nucleotide sequence