Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01147

Experiment: UV exposure at 150J/m2 for 20 seconds

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_01145 and MPMX26_01146 are separated by 166 nucleotidesMPMX26_01146 and MPMX26_01147 are separated by 252 nucleotidesMPMX26_01147 and MPMX26_01148 are separated by 379 nucleotides MPMX26_01145: MPMX26_01145 - Pantothenate precursors transporter PanS, at 1,211,107 to 1,211,988 _01145 MPMX26_01146: MPMX26_01146 - hypothetical protein, at 1,212,155 to 1,212,502 _01146 MPMX26_01147: MPMX26_01147 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG, at 1,212,755 to 1,214,635 _01147 MPMX26_01148: MPMX26_01148 - hypothetical protein, at 1,215,015 to 1,216,013 _01148 Position (kb) 1212 1213 1214 1215Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 1212.715 kb on + strandat 1212.753 kb on + strandat 1212.755 kb on + strandat 1212.762 kb on + strandat 1212.767 kb on + strandat 1212.825 kb on + strandat 1212.848 kb on + strandat 1212.849 kb on + strandat 1212.853 kb on + strandat 1212.868 kb on + strandat 1212.868 kb on + strandat 1212.912 kb on + strandat 1212.922 kb on + strandat 1212.926 kb on + strandat 1212.926 kb on + strandat 1212.926 kb on + strandat 1212.947 kb on + strand, within MPMX26_01147at 1212.947 kb on + strand, within MPMX26_01147at 1212.976 kb on + strand, within MPMX26_01147at 1212.983 kb on + strand, within MPMX26_01147at 1212.984 kb on + strand, within MPMX26_01147at 1212.984 kb on + strand, within MPMX26_01147at 1212.984 kb on + strand, within MPMX26_01147at 1212.984 kb on + strand, within MPMX26_01147at 1212.984 kb on + strand, within MPMX26_01147at 1212.987 kb on + strand, within MPMX26_01147at 1212.987 kb on + strand, within MPMX26_01147at 1212.989 kb on + strand, within MPMX26_01147at 1213.012 kb on + strand, within MPMX26_01147at 1213.020 kb on + strand, within MPMX26_01147at 1213.020 kb on + strand, within MPMX26_01147at 1213.020 kb on + strand, within MPMX26_01147at 1213.020 kb on + strand, within MPMX26_01147at 1213.026 kb on + strand, within MPMX26_01147at 1213.032 kb on + strand, within MPMX26_01147at 1213.038 kb on + strand, within MPMX26_01147at 1213.053 kb on + strand, within MPMX26_01147at 1213.085 kb on + strand, within MPMX26_01147at 1213.085 kb on + strand, within MPMX26_01147at 1213.103 kb on + strand, within MPMX26_01147at 1213.142 kb on + strand, within MPMX26_01147at 1213.147 kb on + strand, within MPMX26_01147at 1213.157 kb on + strand, within MPMX26_01147at 1213.157 kb on + strand, within MPMX26_01147at 1213.157 kb on + strand, within MPMX26_01147at 1213.280 kb on + strand, within MPMX26_01147at 1213.342 kb on + strand, within MPMX26_01147at 1213.350 kb on + strand, within MPMX26_01147at 1213.401 kb on + strand, within MPMX26_01147at 1213.401 kb on + strand, within MPMX26_01147at 1213.438 kb on + strand, within MPMX26_01147at 1213.452 kb on + strand, within MPMX26_01147at 1213.471 kb on + strand, within MPMX26_01147at 1213.471 kb on + strand, within MPMX26_01147at 1213.482 kb on + strand, within MPMX26_01147at 1213.498 kb on + strand, within MPMX26_01147at 1213.527 kb on + strand, within MPMX26_01147at 1213.541 kb on + strand, within MPMX26_01147at 1213.543 kb on + strand, within MPMX26_01147at 1213.544 kb on + strand, within MPMX26_01147at 1213.548 kb on + strand, within MPMX26_01147at 1213.548 kb on + strand, within MPMX26_01147at 1213.548 kb on + strand, within MPMX26_01147at 1213.548 kb on + strand, within MPMX26_01147at 1213.548 kb on + strand, within MPMX26_01147at 1213.566 kb on + strand, within MPMX26_01147at 1213.566 kb on + strand, within MPMX26_01147at 1213.566 kb on + strand, within MPMX26_01147at 1213.566 kb on + strand, within MPMX26_01147at 1213.566 kb on + strand, within MPMX26_01147at 1213.566 kb on + strand, within MPMX26_01147at 1213.566 kb on + strand, within MPMX26_01147at 1213.566 kb on + strand, within MPMX26_01147at 1213.566 kb on + strand, within MPMX26_01147at 1213.566 kb on + strand, within MPMX26_01147at 1213.566 kb on + strand, within MPMX26_01147at 1213.566 kb on + strand, within MPMX26_01147at 1213.566 kb on + strand, within MPMX26_01147at 1213.566 kb on + strand, within MPMX26_01147at 1213.566 kb on + strand, within MPMX26_01147at 1213.566 kb on + strand, within MPMX26_01147at 1213.567 kb on + strand, within MPMX26_01147at 1213.592 kb on + strand, within MPMX26_01147at 1213.625 kb on + strand, within MPMX26_01147at 1213.657 kb on + strand, within MPMX26_01147at 1213.665 kb on + strand, within MPMX26_01147at 1213.665 kb on + strand, within MPMX26_01147at 1213.665 kb on + strand, within MPMX26_01147at 1213.665 kb on + strand, within MPMX26_01147at 1213.665 kb on + strand, within MPMX26_01147at 1213.665 kb on + strand, within MPMX26_01147at 1213.667 kb on + strand, within MPMX26_01147at 1213.672 kb on + strand, within MPMX26_01147at 1213.672 kb on + strand, within MPMX26_01147at 1213.721 kb on + strand, within MPMX26_01147at 1213.726 kb on + strand, within MPMX26_01147at 1213.772 kb on + strand, within MPMX26_01147at 1213.846 kb on + strand, within MPMX26_01147at 1213.864 kb on + strand, within MPMX26_01147at 1213.864 kb on + strand, within MPMX26_01147at 1213.864 kb on + strand, within MPMX26_01147at 1213.864 kb on + strand, within MPMX26_01147at 1213.880 kb on + strand, within MPMX26_01147at 1213.903 kb on + strand, within MPMX26_01147at 1213.916 kb on + strand, within MPMX26_01147at 1213.916 kb on + strand, within MPMX26_01147at 1213.916 kb on + strand, within MPMX26_01147at 1213.916 kb on + strand, within MPMX26_01147at 1213.916 kb on + strand, within MPMX26_01147at 1213.916 kb on + strand, within MPMX26_01147at 1213.916 kb on + strand, within MPMX26_01147at 1213.916 kb on + strand, within MPMX26_01147at 1213.916 kb on + strand, within MPMX26_01147at 1213.916 kb on + strand, within MPMX26_01147at 1213.916 kb on + strand, within MPMX26_01147at 1213.916 kb on + strand, within MPMX26_01147at 1213.916 kb on + strand, within MPMX26_01147at 1213.923 kb on + strand, within MPMX26_01147at 1213.935 kb on + strand, within MPMX26_01147at 1213.938 kb on + strand, within MPMX26_01147at 1213.938 kb on + strand, within MPMX26_01147at 1213.959 kb on + strand, within MPMX26_01147at 1213.975 kb on + strand, within MPMX26_01147at 1213.975 kb on + strand, within MPMX26_01147at 1213.975 kb on + strand, within MPMX26_01147at 1213.975 kb on + strand, within MPMX26_01147at 1213.978 kb on + strand, within MPMX26_01147at 1213.980 kb on + strand, within MPMX26_01147at 1213.980 kb on + strand, within MPMX26_01147at 1213.990 kb on + strand, within MPMX26_01147at 1214.026 kb on + strand, within MPMX26_01147at 1214.060 kb on + strand, within MPMX26_01147at 1214.061 kb on + strand, within MPMX26_01147at 1214.077 kb on + strand, within MPMX26_01147at 1214.098 kb on + strand, within MPMX26_01147at 1214.098 kb on + strand, within MPMX26_01147at 1214.100 kb on + strand, within MPMX26_01147at 1214.100 kb on + strand, within MPMX26_01147at 1214.100 kb on + strand, within MPMX26_01147at 1214.100 kb on + strand, within MPMX26_01147at 1214.102 kb on + strand, within MPMX26_01147at 1214.132 kb on + strand, within MPMX26_01147at 1214.137 kb on + strand, within MPMX26_01147at 1214.142 kb on + strand, within MPMX26_01147at 1214.200 kb on + strand, within MPMX26_01147at 1214.200 kb on + strand, within MPMX26_01147at 1214.200 kb on + strand, within MPMX26_01147at 1214.200 kb on + strand, within MPMX26_01147at 1214.252 kb on + strand, within MPMX26_01147at 1214.272 kb on + strand, within MPMX26_01147at 1214.297 kb on + strand, within MPMX26_01147at 1214.330 kb on + strand, within MPMX26_01147at 1214.330 kb on + strand, within MPMX26_01147at 1214.337 kb on + strand, within MPMX26_01147at 1214.337 kb on + strand, within MPMX26_01147at 1214.349 kb on + strand, within MPMX26_01147at 1214.349 kb on + strand, within MPMX26_01147at 1214.349 kb on + strand, within MPMX26_01147at 1214.393 kb on + strand, within MPMX26_01147at 1214.393 kb on + strand, within MPMX26_01147at 1214.418 kb on + strand, within MPMX26_01147at 1214.418 kb on + strand, within MPMX26_01147at 1214.428 kb on + strand, within MPMX26_01147at 1214.428 kb on + strand, within MPMX26_01147at 1214.428 kb on + strand, within MPMX26_01147at 1214.428 kb on + strand, within MPMX26_01147at 1214.436 kb on - strand, within MPMX26_01147at 1214.480 kb on + strandat 1214.486 kb on + strandat 1214.499 kb on + strandat 1214.517 kb on + strandat 1214.527 kb on + strandat 1214.527 kb on + strandat 1214.527 kb on + strandat 1214.528 kb on + strandat 1214.545 kb on + strandat 1214.550 kb on + strandat 1214.554 kb on + strandat 1214.577 kb on + strandat 1215.033 kb on - strandat 1215.033 kb on - strandat 1215.033 kb on - strandat 1215.035 kb on - strandat 1215.053 kb on - strandat 1215.125 kb on - strand, within MPMX26_01148at 1215.125 kb on - strand, within MPMX26_01148at 1215.125 kb on - strand, within MPMX26_01148at 1215.140 kb on - strand, within MPMX26_01148at 1215.168 kb on - strand, within MPMX26_01148at 1215.173 kb on - strand, within MPMX26_01148at 1215.239 kb on - strand, within MPMX26_01148at 1215.249 kb on - strand, within MPMX26_01148at 1215.263 kb on - strand, within MPMX26_01148at 1215.288 kb on - strand, within MPMX26_01148at 1215.344 kb on - strand, within MPMX26_01148at 1215.378 kb on - strand, within MPMX26_01148at 1215.383 kb on - strand, within MPMX26_01148at 1215.383 kb on - strand, within MPMX26_01148at 1215.383 kb on - strand, within MPMX26_01148at 1215.411 kb on - strand, within MPMX26_01148at 1215.411 kb on - strand, within MPMX26_01148at 1215.488 kb on - strand, within MPMX26_01148at 1215.488 kb on - strand, within MPMX26_01148at 1215.566 kb on - strand, within MPMX26_01148

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
remove
1,212,715 + -0.6
1,212,753 + +0.2
1,212,755 + -1.8
1,212,762 + -1.2
1,212,767 + -0.7
1,212,825 + +0.7
1,212,848 + -1.9
1,212,849 + -0.9
1,212,853 + -1.0
1,212,868 + -2.2
1,212,868 + -1.3
1,212,912 + -1.8
1,212,922 + -0.3
1,212,926 + -1.7
1,212,926 + -1.2
1,212,926 + -1.3
1,212,947 + MPMX26_01147 0.10 -2.6
1,212,947 + MPMX26_01147 0.10 -0.8
1,212,976 + MPMX26_01147 0.12 -2.0
1,212,983 + MPMX26_01147 0.12 -2.6
1,212,984 + MPMX26_01147 0.12 -1.6
1,212,984 + MPMX26_01147 0.12 -1.5
1,212,984 + MPMX26_01147 0.12 -1.8
1,212,984 + MPMX26_01147 0.12 -0.2
1,212,984 + MPMX26_01147 0.12 -1.7
1,212,987 + MPMX26_01147 0.12 -0.9
1,212,987 + MPMX26_01147 0.12 -2.1
1,212,989 + MPMX26_01147 0.12 -2.0
1,213,012 + MPMX26_01147 0.14 -3.0
1,213,020 + MPMX26_01147 0.14 -4.4
1,213,020 + MPMX26_01147 0.14 -0.2
1,213,020 + MPMX26_01147 0.14 -1.0
1,213,020 + MPMX26_01147 0.14 -2.1
1,213,026 + MPMX26_01147 0.14 +0.1
1,213,032 + MPMX26_01147 0.15 -1.7
1,213,038 + MPMX26_01147 0.15 -2.9
1,213,053 + MPMX26_01147 0.16 -1.9
1,213,085 + MPMX26_01147 0.18 -1.7
1,213,085 + MPMX26_01147 0.18 -2.5
1,213,103 + MPMX26_01147 0.19 -0.5
1,213,142 + MPMX26_01147 0.21 -2.0
1,213,147 + MPMX26_01147 0.21 -0.3
1,213,157 + MPMX26_01147 0.21 -2.8
1,213,157 + MPMX26_01147 0.21 -1.4
1,213,157 + MPMX26_01147 0.21 -0.4
1,213,280 + MPMX26_01147 0.28 -1.4
1,213,342 + MPMX26_01147 0.31 -1.8
1,213,350 + MPMX26_01147 0.32 -3.3
1,213,401 + MPMX26_01147 0.34 -2.2
1,213,401 + MPMX26_01147 0.34 -2.3
1,213,438 + MPMX26_01147 0.36 -1.5
1,213,452 + MPMX26_01147 0.37 -2.1
1,213,471 + MPMX26_01147 0.38 -0.9
1,213,471 + MPMX26_01147 0.38 -1.3
1,213,482 + MPMX26_01147 0.39 +0.1
1,213,498 + MPMX26_01147 0.40 -2.2
1,213,527 + MPMX26_01147 0.41 -1.7
1,213,541 + MPMX26_01147 0.42 -1.5
1,213,543 + MPMX26_01147 0.42 -1.3
1,213,544 + MPMX26_01147 0.42 -2.0
1,213,548 + MPMX26_01147 0.42 -1.7
1,213,548 + MPMX26_01147 0.42 -0.8
1,213,548 + MPMX26_01147 0.42 -1.6
1,213,548 + MPMX26_01147 0.42 -2.1
1,213,548 + MPMX26_01147 0.42 -1.5
1,213,566 + MPMX26_01147 0.43 -3.6
1,213,566 + MPMX26_01147 0.43 -0.5
1,213,566 + MPMX26_01147 0.43 -0.6
1,213,566 + MPMX26_01147 0.43 -0.7
1,213,566 + MPMX26_01147 0.43 -2.2
1,213,566 + MPMX26_01147 0.43 -2.3
1,213,566 + MPMX26_01147 0.43 -2.0
1,213,566 + MPMX26_01147 0.43 -1.3
1,213,566 + MPMX26_01147 0.43 -2.3
1,213,566 + MPMX26_01147 0.43 -1.4
1,213,566 + MPMX26_01147 0.43 -0.7
1,213,566 + MPMX26_01147 0.43 -1.6
1,213,566 + MPMX26_01147 0.43 -1.2
1,213,566 + MPMX26_01147 0.43 -1.7
1,213,566 + MPMX26_01147 0.43 -1.5
1,213,566 + MPMX26_01147 0.43 -1.1
1,213,567 + MPMX26_01147 0.43 -2.7
1,213,592 + MPMX26_01147 0.44 -2.0
1,213,625 + MPMX26_01147 0.46 -1.6
1,213,657 + MPMX26_01147 0.48 -2.9
1,213,665 + MPMX26_01147 0.48 -2.3
1,213,665 + MPMX26_01147 0.48 -3.0
1,213,665 + MPMX26_01147 0.48 -1.4
1,213,665 + MPMX26_01147 0.48 -2.3
1,213,665 + MPMX26_01147 0.48 -3.6
1,213,665 + MPMX26_01147 0.48 -1.0
1,213,667 + MPMX26_01147 0.48 -1.4
1,213,672 + MPMX26_01147 0.49 -0.7
1,213,672 + MPMX26_01147 0.49 -0.6
1,213,721 + MPMX26_01147 0.51 +1.7
1,213,726 + MPMX26_01147 0.52 -1.4
1,213,772 + MPMX26_01147 0.54 -1.6
1,213,846 + MPMX26_01147 0.58 -2.9
1,213,864 + MPMX26_01147 0.59 -2.1
1,213,864 + MPMX26_01147 0.59 -1.0
1,213,864 + MPMX26_01147 0.59 -0.9
1,213,864 + MPMX26_01147 0.59 -0.6
1,213,880 + MPMX26_01147 0.60 -2.3
1,213,903 + MPMX26_01147 0.61 -1.2
1,213,916 + MPMX26_01147 0.62 -2.0
1,213,916 + MPMX26_01147 0.62 -1.9
1,213,916 + MPMX26_01147 0.62 -0.2
1,213,916 + MPMX26_01147 0.62 -0.5
1,213,916 + MPMX26_01147 0.62 -2.3
1,213,916 + MPMX26_01147 0.62 -0.9
1,213,916 + MPMX26_01147 0.62 -1.8
1,213,916 + MPMX26_01147 0.62 -1.4
1,213,916 + MPMX26_01147 0.62 -1.2
1,213,916 + MPMX26_01147 0.62 +0.4
1,213,916 + MPMX26_01147 0.62 -0.3
1,213,916 + MPMX26_01147 0.62 -1.5
1,213,916 + MPMX26_01147 0.62 -0.9
1,213,923 + MPMX26_01147 0.62 -1.3
1,213,935 + MPMX26_01147 0.63 -0.7
1,213,938 + MPMX26_01147 0.63 -2.4
1,213,938 + MPMX26_01147 0.63 -1.1
1,213,959 + MPMX26_01147 0.64 -1.8
1,213,975 + MPMX26_01147 0.65 -2.3
1,213,975 + MPMX26_01147 0.65 -1.0
1,213,975 + MPMX26_01147 0.65 -1.5
1,213,975 + MPMX26_01147 0.65 -0.7
1,213,978 + MPMX26_01147 0.65 -2.0
1,213,980 + MPMX26_01147 0.65 -1.5
1,213,980 + MPMX26_01147 0.65 -0.2
1,213,990 + MPMX26_01147 0.66 -2.0
1,214,026 + MPMX26_01147 0.68 -2.4
1,214,060 + MPMX26_01147 0.69 -0.8
1,214,061 + MPMX26_01147 0.69 -1.3
1,214,077 + MPMX26_01147 0.70 -0.5
1,214,098 + MPMX26_01147 0.71 -1.3
1,214,098 + MPMX26_01147 0.71 -1.0
1,214,100 + MPMX26_01147 0.72 -1.9
1,214,100 + MPMX26_01147 0.72 -1.7
1,214,100 + MPMX26_01147 0.72 -1.0
1,214,100 + MPMX26_01147 0.72 -1.1
1,214,102 + MPMX26_01147 0.72 -0.3
1,214,132 + MPMX26_01147 0.73 -2.2
1,214,137 + MPMX26_01147 0.73 -1.9
1,214,142 + MPMX26_01147 0.74 -1.7
1,214,200 + MPMX26_01147 0.77 -2.6
1,214,200 + MPMX26_01147 0.77 -1.9
1,214,200 + MPMX26_01147 0.77 -1.9
1,214,200 + MPMX26_01147 0.77 -1.2
1,214,252 + MPMX26_01147 0.80 -0.6
1,214,272 + MPMX26_01147 0.81 +0.0
1,214,297 + MPMX26_01147 0.82 -0.3
1,214,330 + MPMX26_01147 0.84 -0.7
1,214,330 + MPMX26_01147 0.84 -1.3
1,214,337 + MPMX26_01147 0.84 -1.2
1,214,337 + MPMX26_01147 0.84 -1.3
1,214,349 + MPMX26_01147 0.85 -1.7
1,214,349 + MPMX26_01147 0.85 -0.7
1,214,349 + MPMX26_01147 0.85 -2.6
1,214,393 + MPMX26_01147 0.87 -2.1
1,214,393 + MPMX26_01147 0.87 -0.9
1,214,418 + MPMX26_01147 0.88 -1.3
1,214,418 + MPMX26_01147 0.88 -1.8
1,214,428 + MPMX26_01147 0.89 -1.9
1,214,428 + MPMX26_01147 0.89 -2.6
1,214,428 + MPMX26_01147 0.89 -1.3
1,214,428 + MPMX26_01147 0.89 -1.8
1,214,436 - MPMX26_01147 0.89 +1.1
1,214,480 + -0.9
1,214,486 + -1.5
1,214,499 + -1.7
1,214,517 + -0.2
1,214,527 + -1.4
1,214,527 + -1.8
1,214,527 + -0.4
1,214,528 + -1.0
1,214,545 + -2.3
1,214,550 + -2.1
1,214,554 + -2.1
1,214,577 + -2.4
1,215,033 - +0.7
1,215,033 - -0.7
1,215,033 - -0.3
1,215,035 - -0.3
1,215,053 - -0.3
1,215,125 - MPMX26_01148 0.11 +0.3
1,215,125 - MPMX26_01148 0.11 -0.2
1,215,125 - MPMX26_01148 0.11 +2.1
1,215,140 - MPMX26_01148 0.13 -0.2
1,215,168 - MPMX26_01148 0.15 -0.4
1,215,173 - MPMX26_01148 0.16 +0.0
1,215,239 - MPMX26_01148 0.22 -0.7
1,215,249 - MPMX26_01148 0.23 -0.7
1,215,263 - MPMX26_01148 0.25 +0.2
1,215,288 - MPMX26_01148 0.27 +0.4
1,215,344 - MPMX26_01148 0.33 -1.3
1,215,378 - MPMX26_01148 0.36 -1.0
1,215,383 - MPMX26_01148 0.37 -0.9
1,215,383 - MPMX26_01148 0.37 +0.4
1,215,383 - MPMX26_01148 0.37 -0.4
1,215,411 - MPMX26_01148 0.40 -0.5
1,215,411 - MPMX26_01148 0.40 +0.1
1,215,488 - MPMX26_01148 0.47 -0.5
1,215,488 - MPMX26_01148 0.47 -0.3
1,215,566 - MPMX26_01148 0.55 +0.7

Or see this region's nucleotide sequence