Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01140

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01139 and MPMX26_01140 are separated by 125 nucleotidesMPMX26_01140 and MPMX26_01141 are separated by 145 nucleotides MPMX26_01139: MPMX26_01139 - Hydroxyacylglutathione hydrolase GloB, at 1,204,637 to 1,205,368 _01139 MPMX26_01140: MPMX26_01140 - Phosphoribosylamine--glycine ligase, at 1,205,494 to 1,206,777 _01140 MPMX26_01141: MPMX26_01141 - Bifunctional purine biosynthesis protein PurH, at 1,206,923 to 1,208,497 _01141 Position (kb) 1205 1206 1207Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1204.547 kb on + strandat 1204.714 kb on - strand, within MPMX26_01139at 1204.738 kb on - strand, within MPMX26_01139at 1204.790 kb on - strand, within MPMX26_01139at 1204.790 kb on - strand, within MPMX26_01139at 1204.790 kb on - strand, within MPMX26_01139at 1204.792 kb on - strand, within MPMX26_01139at 1204.792 kb on - strand, within MPMX26_01139at 1204.792 kb on - strand, within MPMX26_01139at 1204.792 kb on - strand, within MPMX26_01139at 1204.792 kb on - strand, within MPMX26_01139at 1204.792 kb on - strand, within MPMX26_01139at 1204.792 kb on - strand, within MPMX26_01139at 1204.792 kb on - strand, within MPMX26_01139at 1204.838 kb on - strand, within MPMX26_01139at 1204.946 kb on - strand, within MPMX26_01139at 1205.027 kb on - strand, within MPMX26_01139at 1205.147 kb on - strand, within MPMX26_01139at 1205.261 kb on - strand, within MPMX26_01139at 1205.276 kb on - strand, within MPMX26_01139at 1205.281 kb on - strand, within MPMX26_01139at 1205.308 kb on - strandat 1205.547 kb on - strandat 1205.547 kb on - strandat 1205.557 kb on - strandat 1205.557 kb on - strandat 1205.557 kb on - strandat 1205.619 kb on - strandat 1205.629 kb on - strand, within MPMX26_01140at 1205.629 kb on - strand, within MPMX26_01140at 1205.629 kb on - strand, within MPMX26_01140at 1205.629 kb on - strand, within MPMX26_01140at 1205.629 kb on - strand, within MPMX26_01140at 1205.637 kb on - strand, within MPMX26_01140at 1205.637 kb on - strand, within MPMX26_01140at 1205.639 kb on - strand, within MPMX26_01140at 1205.639 kb on - strand, within MPMX26_01140at 1205.639 kb on - strand, within MPMX26_01140at 1205.639 kb on - strand, within MPMX26_01140at 1205.646 kb on - strand, within MPMX26_01140at 1205.701 kb on - strand, within MPMX26_01140at 1205.712 kb on - strand, within MPMX26_01140at 1205.724 kb on - strand, within MPMX26_01140at 1205.724 kb on - strand, within MPMX26_01140at 1205.757 kb on - strand, within MPMX26_01140at 1205.768 kb on - strand, within MPMX26_01140at 1205.769 kb on - strand, within MPMX26_01140at 1205.797 kb on - strand, within MPMX26_01140at 1205.797 kb on - strand, within MPMX26_01140at 1206.077 kb on - strand, within MPMX26_01140at 1206.084 kb on - strand, within MPMX26_01140at 1206.094 kb on - strand, within MPMX26_01140at 1206.094 kb on - strand, within MPMX26_01140at 1206.094 kb on - strand, within MPMX26_01140at 1206.094 kb on - strand, within MPMX26_01140at 1206.106 kb on - strand, within MPMX26_01140at 1206.108 kb on - strand, within MPMX26_01140at 1206.108 kb on - strand, within MPMX26_01140at 1206.108 kb on - strand, within MPMX26_01140at 1206.108 kb on - strand, within MPMX26_01140at 1206.108 kb on - strand, within MPMX26_01140at 1206.108 kb on - strand, within MPMX26_01140at 1206.108 kb on - strand, within MPMX26_01140at 1206.115 kb on - strand, within MPMX26_01140at 1206.144 kb on - strand, within MPMX26_01140at 1206.144 kb on - strand, within MPMX26_01140at 1206.144 kb on - strand, within MPMX26_01140at 1206.146 kb on - strand, within MPMX26_01140at 1206.171 kb on - strand, within MPMX26_01140at 1206.204 kb on - strand, within MPMX26_01140at 1206.204 kb on - strand, within MPMX26_01140at 1206.204 kb on - strand, within MPMX26_01140at 1206.233 kb on - strand, within MPMX26_01140at 1206.233 kb on - strand, within MPMX26_01140at 1206.276 kb on - strand, within MPMX26_01140at 1206.318 kb on - strand, within MPMX26_01140at 1206.318 kb on - strand, within MPMX26_01140at 1206.335 kb on - strand, within MPMX26_01140at 1206.349 kb on - strand, within MPMX26_01140at 1206.470 kb on - strand, within MPMX26_01140at 1206.470 kb on - strand, within MPMX26_01140at 1206.470 kb on - strand, within MPMX26_01140at 1206.470 kb on - strand, within MPMX26_01140at 1206.470 kb on - strand, within MPMX26_01140at 1206.478 kb on - strand, within MPMX26_01140at 1206.478 kb on - strand, within MPMX26_01140at 1206.478 kb on - strand, within MPMX26_01140at 1206.478 kb on - strand, within MPMX26_01140at 1206.550 kb on - strand, within MPMX26_01140at 1206.561 kb on - strand, within MPMX26_01140at 1206.577 kb on - strand, within MPMX26_01140at 1206.627 kb on - strand, within MPMX26_01140at 1206.638 kb on - strand, within MPMX26_01140at 1206.682 kb on - strandat 1206.697 kb on - strandat 1206.712 kb on - strandat 1206.749 kb on - strandat 1206.956 kb on - strandat 1207.011 kb on - strandat 1207.063 kb on - strandat 1207.164 kb on - strand, within MPMX26_01141at 1207.164 kb on - strand, within MPMX26_01141at 1207.164 kb on - strand, within MPMX26_01141at 1207.177 kb on - strand, within MPMX26_01141at 1207.177 kb on - strand, within MPMX26_01141at 1207.177 kb on - strand, within MPMX26_01141at 1207.177 kb on - strand, within MPMX26_01141at 1207.235 kb on - strand, within MPMX26_01141at 1207.313 kb on - strand, within MPMX26_01141at 1207.345 kb on - strand, within MPMX26_01141at 1207.370 kb on - strand, within MPMX26_01141at 1207.427 kb on - strand, within MPMX26_01141at 1207.482 kb on - strand, within MPMX26_01141at 1207.484 kb on - strand, within MPMX26_01141at 1207.489 kb on - strand, within MPMX26_01141at 1207.489 kb on - strand, within MPMX26_01141at 1207.526 kb on - strand, within MPMX26_01141at 1207.549 kb on - strand, within MPMX26_01141at 1207.615 kb on - strand, within MPMX26_01141at 1207.615 kb on - strand, within MPMX26_01141at 1207.615 kb on - strand, within MPMX26_01141at 1207.615 kb on - strand, within MPMX26_01141at 1207.615 kb on - strand, within MPMX26_01141at 1207.615 kb on - strand, within MPMX26_01141at 1207.615 kb on - strand, within MPMX26_01141at 1207.615 kb on - strand, within MPMX26_01141at 1207.615 kb on - strand, within MPMX26_01141at 1207.615 kb on - strand, within MPMX26_01141at 1207.615 kb on - strand, within MPMX26_01141at 1207.615 kb on - strand, within MPMX26_01141at 1207.615 kb on - strand, within MPMX26_01141at 1207.625 kb on - strand, within MPMX26_01141at 1207.626 kb on - strand, within MPMX26_01141at 1207.647 kb on - strand, within MPMX26_01141at 1207.712 kb on - strand, within MPMX26_01141at 1207.714 kb on - strand, within MPMX26_01141at 1207.773 kb on - strand, within MPMX26_01141

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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1,204,547 + +1.1
1,204,714 - MPMX26_01139 0.11 +0.9
1,204,738 - MPMX26_01139 0.14 -0.1
1,204,790 - MPMX26_01139 0.21 +0.5
1,204,790 - MPMX26_01139 0.21 -0.2
1,204,790 - MPMX26_01139 0.21 +2.4
1,204,792 - MPMX26_01139 0.21 -0.3
1,204,792 - MPMX26_01139 0.21 +0.7
1,204,792 - MPMX26_01139 0.21 +0.5
1,204,792 - MPMX26_01139 0.21 +0.5
1,204,792 - MPMX26_01139 0.21 -0.5
1,204,792 - MPMX26_01139 0.21 +0.2
1,204,792 - MPMX26_01139 0.21 +0.7
1,204,792 - MPMX26_01139 0.21 +0.0
1,204,838 - MPMX26_01139 0.27 -0.3
1,204,946 - MPMX26_01139 0.42 -0.1
1,205,027 - MPMX26_01139 0.53 -0.3
1,205,147 - MPMX26_01139 0.70 -0.9
1,205,261 - MPMX26_01139 0.85 -0.4
1,205,276 - MPMX26_01139 0.87 +0.1
1,205,281 - MPMX26_01139 0.88 +0.6
1,205,308 - +0.5
1,205,547 - -0.3
1,205,547 - -1.0
1,205,557 - -1.1
1,205,557 - -2.1
1,205,557 - +0.1
1,205,619 - -1.2
1,205,629 - MPMX26_01140 0.11 -2.9
1,205,629 - MPMX26_01140 0.11 -1.1
1,205,629 - MPMX26_01140 0.11 -0.3
1,205,629 - MPMX26_01140 0.11 -0.9
1,205,629 - MPMX26_01140 0.11 -1.2
1,205,637 - MPMX26_01140 0.11 -0.7
1,205,637 - MPMX26_01140 0.11 -1.9
1,205,639 - MPMX26_01140 0.11 +0.1
1,205,639 - MPMX26_01140 0.11 -0.7
1,205,639 - MPMX26_01140 0.11 -1.3
1,205,639 - MPMX26_01140 0.11 -1.5
1,205,646 - MPMX26_01140 0.12 +1.7
1,205,701 - MPMX26_01140 0.16 +0.4
1,205,712 - MPMX26_01140 0.17 -1.7
1,205,724 - MPMX26_01140 0.18 -1.7
1,205,724 - MPMX26_01140 0.18 -1.1
1,205,757 - MPMX26_01140 0.20 -0.7
1,205,768 - MPMX26_01140 0.21 -0.9
1,205,769 - MPMX26_01140 0.21 -1.5
1,205,797 - MPMX26_01140 0.24 -1.3
1,205,797 - MPMX26_01140 0.24 -1.2
1,206,077 - MPMX26_01140 0.45 +0.1
1,206,084 - MPMX26_01140 0.46 -0.2
1,206,094 - MPMX26_01140 0.47 -0.1
1,206,094 - MPMX26_01140 0.47 -2.3
1,206,094 - MPMX26_01140 0.47 -0.3
1,206,094 - MPMX26_01140 0.47 +0.2
1,206,106 - MPMX26_01140 0.48 -0.9
1,206,108 - MPMX26_01140 0.48 +0.7
1,206,108 - MPMX26_01140 0.48 -2.3
1,206,108 - MPMX26_01140 0.48 +0.1
1,206,108 - MPMX26_01140 0.48 +0.1
1,206,108 - MPMX26_01140 0.48 -0.3
1,206,108 - MPMX26_01140 0.48 +1.1
1,206,108 - MPMX26_01140 0.48 -1.8
1,206,115 - MPMX26_01140 0.48 -1.7
1,206,144 - MPMX26_01140 0.51 +0.7
1,206,144 - MPMX26_01140 0.51 -1.5
1,206,144 - MPMX26_01140 0.51 -1.4
1,206,146 - MPMX26_01140 0.51 -0.8
1,206,171 - MPMX26_01140 0.53 -1.3
1,206,204 - MPMX26_01140 0.55 -0.7
1,206,204 - MPMX26_01140 0.55 -0.8
1,206,204 - MPMX26_01140 0.55 -2.2
1,206,233 - MPMX26_01140 0.58 -0.9
1,206,233 - MPMX26_01140 0.58 -0.5
1,206,276 - MPMX26_01140 0.61 -1.7
1,206,318 - MPMX26_01140 0.64 -0.3
1,206,318 - MPMX26_01140 0.64 +0.1
1,206,335 - MPMX26_01140 0.65 -1.3
1,206,349 - MPMX26_01140 0.67 -1.9
1,206,470 - MPMX26_01140 0.76 -0.7
1,206,470 - MPMX26_01140 0.76 -0.7
1,206,470 - MPMX26_01140 0.76 -0.2
1,206,470 - MPMX26_01140 0.76 -0.9
1,206,470 - MPMX26_01140 0.76 +1.7
1,206,478 - MPMX26_01140 0.77 -0.9
1,206,478 - MPMX26_01140 0.77 -1.7
1,206,478 - MPMX26_01140 0.77 -2.5
1,206,478 - MPMX26_01140 0.77 -1.3
1,206,550 - MPMX26_01140 0.82 +0.1
1,206,561 - MPMX26_01140 0.83 -0.4
1,206,577 - MPMX26_01140 0.84 -1.7
1,206,627 - MPMX26_01140 0.88 -0.8
1,206,638 - MPMX26_01140 0.89 -0.7
1,206,682 - -0.2
1,206,697 - -0.1
1,206,712 - -1.4
1,206,749 - +0.3
1,206,956 - -1.5
1,207,011 - -1.3
1,207,063 - -1.2
1,207,164 - MPMX26_01141 0.15 +1.7
1,207,164 - MPMX26_01141 0.15 -2.0
1,207,164 - MPMX26_01141 0.15 +0.1
1,207,177 - MPMX26_01141 0.16 -2.3
1,207,177 - MPMX26_01141 0.16 -0.7
1,207,177 - MPMX26_01141 0.16 +1.7
1,207,177 - MPMX26_01141 0.16 -0.9
1,207,235 - MPMX26_01141 0.20 -2.0
1,207,313 - MPMX26_01141 0.25 -1.3
1,207,345 - MPMX26_01141 0.27 -1.3
1,207,370 - MPMX26_01141 0.28 +0.1
1,207,427 - MPMX26_01141 0.32 -1.7
1,207,482 - MPMX26_01141 0.35 +0.7
1,207,484 - MPMX26_01141 0.36 -1.2
1,207,489 - MPMX26_01141 0.36 -0.9
1,207,489 - MPMX26_01141 0.36 +0.1
1,207,526 - MPMX26_01141 0.38 +0.7
1,207,549 - MPMX26_01141 0.40 -1.7
1,207,615 - MPMX26_01141 0.44 -0.3
1,207,615 - MPMX26_01141 0.44 -1.2
1,207,615 - MPMX26_01141 0.44 +0.1
1,207,615 - MPMX26_01141 0.44 -0.2
1,207,615 - MPMX26_01141 0.44 -1.5
1,207,615 - MPMX26_01141 0.44 -0.3
1,207,615 - MPMX26_01141 0.44 +1.7
1,207,615 - MPMX26_01141 0.44 -1.9
1,207,615 - MPMX26_01141 0.44 -1.9
1,207,615 - MPMX26_01141 0.44 -0.9
1,207,615 - MPMX26_01141 0.44 +0.1
1,207,615 - MPMX26_01141 0.44 -2.0
1,207,615 - MPMX26_01141 0.44 -1.7
1,207,625 - MPMX26_01141 0.45 +0.7
1,207,626 - MPMX26_01141 0.45 -1.5
1,207,647 - MPMX26_01141 0.46 +1.7
1,207,712 - MPMX26_01141 0.50 -1.3
1,207,714 - MPMX26_01141 0.50 -0.3
1,207,773 - MPMX26_01141 0.54 +0.7

Or see this region's nucleotide sequence