Experiment: UV exposure at 150J/m2 for 20 seconds
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01099 and MPMX26_01100 are separated by 10 nucleotides MPMX26_01100 and MPMX26_01101 are separated by 202 nucleotides
MPMX26_01099: MPMX26_01099 - Aspartate carbamoyltransferase, at 1,171,004 to 1,172,020
_01099
MPMX26_01100: MPMX26_01100 - Dihydroorotase-like protein, at 1,172,031 to 1,173,266
_01100
MPMX26_01101: MPMX26_01101 - Peptidoglycan-associated lipoprotein, at 1,173,469 to 1,174,929
_01101
Position (kb) 1172
1173
1174 Strain fitness (log2 ratio) -1
0
1 at 1171.187 kb on + strand, within MPMX26_01099 at 1171.297 kb on + strand, within MPMX26_01099 at 1171.315 kb on + strand, within MPMX26_01099 at 1171.448 kb on + strand, within MPMX26_01099 at 1171.468 kb on + strand, within MPMX26_01099 at 1171.468 kb on + strand, within MPMX26_01099 at 1171.472 kb on + strand, within MPMX26_01099 at 1171.472 kb on + strand, within MPMX26_01099 at 1171.568 kb on + strand, within MPMX26_01099 at 1171.586 kb on + strand, within MPMX26_01099 at 1171.633 kb on + strand, within MPMX26_01099 at 1171.945 kb on + strand at 1171.945 kb on + strand at 1171.945 kb on + strand at 1171.945 kb on + strand at 1171.945 kb on + strand at 1172.011 kb on + strand at 1172.021 kb on + strand at 1172.028 kb on + strand at 1172.205 kb on + strand, within MPMX26_01100 at 1172.321 kb on + strand, within MPMX26_01100 at 1172.363 kb on + strand, within MPMX26_01100 at 1172.402 kb on + strand, within MPMX26_01100 at 1172.481 kb on + strand, within MPMX26_01100 at 1172.535 kb on + strand, within MPMX26_01100 at 1172.540 kb on + strand, within MPMX26_01100 at 1172.540 kb on + strand, within MPMX26_01100 at 1172.540 kb on + strand, within MPMX26_01100 at 1172.540 kb on + strand, within MPMX26_01100 at 1172.540 kb on + strand, within MPMX26_01100 at 1172.540 kb on + strand, within MPMX26_01100 at 1172.555 kb on + strand, within MPMX26_01100 at 1172.555 kb on + strand, within MPMX26_01100 at 1172.555 kb on + strand, within MPMX26_01100 at 1172.598 kb on + strand, within MPMX26_01100 at 1172.642 kb on + strand, within MPMX26_01100 at 1172.723 kb on + strand, within MPMX26_01100 at 1172.747 kb on + strand, within MPMX26_01100 at 1172.762 kb on + strand, within MPMX26_01100 at 1172.802 kb on + strand, within MPMX26_01100 at 1172.862 kb on + strand, within MPMX26_01100 at 1172.862 kb on + strand, within MPMX26_01100 at 1172.862 kb on + strand, within MPMX26_01100 at 1172.862 kb on + strand, within MPMX26_01100 at 1172.862 kb on + strand, within MPMX26_01100 at 1172.862 kb on + strand, within MPMX26_01100 at 1172.862 kb on + strand, within MPMX26_01100 at 1172.874 kb on + strand, within MPMX26_01100 at 1172.874 kb on + strand, within MPMX26_01100 at 1172.874 kb on + strand, within MPMX26_01100 at 1172.874 kb on + strand, within MPMX26_01100 at 1172.879 kb on + strand, within MPMX26_01100 at 1172.886 kb on + strand, within MPMX26_01100 at 1172.901 kb on + strand, within MPMX26_01100 at 1172.946 kb on + strand, within MPMX26_01100 at 1173.038 kb on + strand, within MPMX26_01100 at 1173.038 kb on + strand, within MPMX26_01100 at 1173.048 kb on + strand, within MPMX26_01100 at 1173.149 kb on + strand at 1173.164 kb on + strand at 1173.164 kb on + strand at 1173.194 kb on + strand at 1173.194 kb on + strand at 1173.231 kb on + strand at 1173.236 kb on + strand at 1173.236 kb on + strand at 1173.236 kb on + strand at 1173.236 kb on + strand at 1173.825 kb on + strand, within MPMX26_01101
Per-strain Table
Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds remove 1,171,187 + MPMX26_01099 0.18 +0.7 1,171,297 + MPMX26_01099 0.29 +0.7 1,171,315 + MPMX26_01099 0.31 +0.1 1,171,448 + MPMX26_01099 0.44 +0.1 1,171,468 + MPMX26_01099 0.46 -0.3 1,171,468 + MPMX26_01099 0.46 -0.3 1,171,472 + MPMX26_01099 0.46 +0.7 1,171,472 + MPMX26_01099 0.46 -0.7 1,171,568 + MPMX26_01099 0.55 -0.9 1,171,586 + MPMX26_01099 0.57 +0.7 1,171,633 + MPMX26_01099 0.62 -0.3 1,171,945 + -0.3 1,171,945 + -0.3 1,171,945 + +0.7 1,171,945 + +0.1 1,171,945 + +0.7 1,172,011 + +1.2 1,172,021 + +0.4 1,172,028 + -0.2 1,172,205 + MPMX26_01100 0.14 -0.3 1,172,321 + MPMX26_01100 0.23 +0.1 1,172,363 + MPMX26_01100 0.27 -0.3 1,172,402 + MPMX26_01100 0.30 -0.3 1,172,481 + MPMX26_01100 0.36 +0.7 1,172,535 + MPMX26_01100 0.41 +0.1 1,172,540 + MPMX26_01100 0.41 +0.1 1,172,540 + MPMX26_01100 0.41 +1.7 1,172,540 + MPMX26_01100 0.41 -1.1 1,172,540 + MPMX26_01100 0.41 +0.7 1,172,540 + MPMX26_01100 0.41 -0.7 1,172,540 + MPMX26_01100 0.41 -0.7 1,172,555 + MPMX26_01100 0.42 +0.1 1,172,555 + MPMX26_01100 0.42 -0.3 1,172,555 + MPMX26_01100 0.42 +1.7 1,172,598 + MPMX26_01100 0.46 +0.1 1,172,642 + MPMX26_01100 0.49 -0.9 1,172,723 + MPMX26_01100 0.56 -0.7 1,172,747 + MPMX26_01100 0.58 +0.7 1,172,762 + MPMX26_01100 0.59 -0.3 1,172,802 + MPMX26_01100 0.62 +0.7 1,172,862 + MPMX26_01100 0.67 -0.3 1,172,862 + MPMX26_01100 0.67 +0.7 1,172,862 + MPMX26_01100 0.67 +0.1 1,172,862 + MPMX26_01100 0.67 +0.1 1,172,862 + MPMX26_01100 0.67 -0.3 1,172,862 + MPMX26_01100 0.67 -0.7 1,172,862 + MPMX26_01100 0.67 +0.7 1,172,874 + MPMX26_01100 0.68 -0.3 1,172,874 + MPMX26_01100 0.68 -0.7 1,172,874 + MPMX26_01100 0.68 +0.7 1,172,874 + MPMX26_01100 0.68 -0.9 1,172,879 + MPMX26_01100 0.69 -0.9 1,172,886 + MPMX26_01100 0.69 -0.7 1,172,901 + MPMX26_01100 0.70 -0.9 1,172,946 + MPMX26_01100 0.74 -0.7 1,173,038 + MPMX26_01100 0.81 +0.7 1,173,038 + MPMX26_01100 0.81 +0.7 1,173,048 + MPMX26_01100 0.82 -0.3 1,173,149 + +0.1 1,173,164 + +1.7 1,173,164 + +1.7 1,173,194 + -0.9 1,173,194 + -0.3 1,173,231 + -0.3 1,173,236 + -0.3 1,173,236 + -0.3 1,173,236 + -0.4 1,173,236 + -0.3 1,173,825 + MPMX26_01101 0.24 -1.1
Or see this region's nucleotide sequence