Experiment: UV exposure at 150J/m2 for 20 seconds
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01086 and MPMX26_01087 are separated by 269 nucleotides MPMX26_01087 and MPMX26_01088 are separated by 81 nucleotides MPMX26_01088 and MPMX26_01089 are separated by 326 nucleotides
MPMX26_01086: MPMX26_01086 - Alanine--tRNA ligase, at 1,153,624 to 1,156,302
_01086
MPMX26_01087: MPMX26_01087 - D-erythrose-4-phosphate dehydrogenase, at 1,156,572 to 1,157,594
_01087
MPMX26_01088: MPMX26_01088 - hypothetical protein, at 1,157,676 to 1,157,996
_01088
MPMX26_01089: MPMX26_01089 - ATP phosphoribosyltransferase regulatory subunit, at 1,158,323 to 1,159,489
_01089
Position (kb) 1156
1157
1158 Strain fitness (log2 ratio) -2
-1
0
1 at 1156.569 kb on + strand at 1156.569 kb on + strand at 1156.704 kb on + strand, within MPMX26_01087 at 1156.709 kb on + strand, within MPMX26_01087 at 1156.709 kb on + strand, within MPMX26_01087 at 1156.714 kb on + strand, within MPMX26_01087 at 1156.714 kb on + strand, within MPMX26_01087 at 1156.893 kb on + strand, within MPMX26_01087 at 1157.051 kb on + strand, within MPMX26_01087 at 1157.051 kb on + strand, within MPMX26_01087 at 1157.051 kb on + strand, within MPMX26_01087 at 1157.051 kb on + strand, within MPMX26_01087 at 1157.107 kb on + strand, within MPMX26_01087 at 1157.150 kb on + strand, within MPMX26_01087 at 1157.151 kb on + strand, within MPMX26_01087 at 1157.165 kb on + strand, within MPMX26_01087 at 1157.172 kb on + strand, within MPMX26_01087 at 1157.205 kb on + strand, within MPMX26_01087 at 1157.706 kb on + strand at 1158.503 kb on + strand, within MPMX26_01089 at 1158.509 kb on + strand, within MPMX26_01089 at 1158.569 kb on + strand, within MPMX26_01089
Per-strain Table
Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds remove 1,156,569 + -1.2 1,156,569 + +0.9 1,156,704 + MPMX26_01087 0.13 -0.3 1,156,709 + MPMX26_01087 0.13 +0.7 1,156,709 + MPMX26_01087 0.13 +0.9 1,156,714 + MPMX26_01087 0.14 -0.3 1,156,714 + MPMX26_01087 0.14 -0.3 1,156,893 + MPMX26_01087 0.31 -2.1 1,157,051 + MPMX26_01087 0.47 -1.8 1,157,051 + MPMX26_01087 0.47 +0.1 1,157,051 + MPMX26_01087 0.47 -1.3 1,157,051 + MPMX26_01087 0.47 +0.7 1,157,107 + MPMX26_01087 0.52 +0.1 1,157,150 + MPMX26_01087 0.57 -1.2 1,157,151 + MPMX26_01087 0.57 +0.1 1,157,165 + MPMX26_01087 0.58 -0.3 1,157,172 + MPMX26_01087 0.59 +0.3 1,157,205 + MPMX26_01087 0.62 -1.5 1,157,706 + +0.1 1,158,503 + MPMX26_01089 0.15 +0.1 1,158,509 + MPMX26_01089 0.16 -0.7 1,158,569 + MPMX26_01089 0.21 -0.3
Or see this region's nucleotide sequence