Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01065

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01064 and MPMX26_01065 overlap by 4 nucleotidesMPMX26_01065 and MPMX26_01066 are separated by 15 nucleotides MPMX26_01064: MPMX26_01064 - hypothetical protein, at 1,128,793 to 1,130,913 _01064 MPMX26_01065: MPMX26_01065 - Cyclic-di-GMP receptor FimW, at 1,130,910 to 1,132,664 _01065 MPMX26_01066: MPMX26_01066 - L-lysine 2,3-aminomutase, at 1,132,680 to 1,133,696 _01066 Position (kb) 1130 1131 1132 1133Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1129.912 kb on - strand, within MPMX26_01064at 1129.912 kb on - strand, within MPMX26_01064at 1129.951 kb on - strand, within MPMX26_01064at 1130.044 kb on - strand, within MPMX26_01064at 1130.062 kb on - strand, within MPMX26_01064at 1130.063 kb on - strand, within MPMX26_01064at 1130.091 kb on - strand, within MPMX26_01064at 1130.091 kb on - strand, within MPMX26_01064at 1130.091 kb on - strand, within MPMX26_01064at 1130.105 kb on - strand, within MPMX26_01064at 1130.154 kb on - strand, within MPMX26_01064at 1130.166 kb on - strand, within MPMX26_01064at 1130.260 kb on - strand, within MPMX26_01064at 1130.260 kb on - strand, within MPMX26_01064at 1130.308 kb on - strand, within MPMX26_01064at 1130.325 kb on - strand, within MPMX26_01064at 1130.334 kb on - strand, within MPMX26_01064at 1130.346 kb on - strand, within MPMX26_01064at 1130.455 kb on - strand, within MPMX26_01064at 1130.461 kb on - strand, within MPMX26_01064at 1130.476 kb on - strand, within MPMX26_01064at 1130.491 kb on - strand, within MPMX26_01064at 1130.499 kb on - strand, within MPMX26_01064at 1130.506 kb on - strand, within MPMX26_01064at 1130.506 kb on - strand, within MPMX26_01064at 1130.515 kb on - strand, within MPMX26_01064at 1130.533 kb on - strand, within MPMX26_01064at 1130.537 kb on - strand, within MPMX26_01064at 1130.538 kb on - strand, within MPMX26_01064at 1130.538 kb on - strand, within MPMX26_01064at 1130.548 kb on - strand, within MPMX26_01064at 1130.669 kb on - strand, within MPMX26_01064at 1130.671 kb on - strand, within MPMX26_01064at 1130.671 kb on - strand, within MPMX26_01064at 1130.671 kb on - strand, within MPMX26_01064at 1130.671 kb on - strand, within MPMX26_01064at 1130.671 kb on - strand, within MPMX26_01064at 1130.671 kb on - strand, within MPMX26_01064at 1130.671 kb on - strand, within MPMX26_01064at 1130.671 kb on - strand, within MPMX26_01064at 1130.679 kb on - strand, within MPMX26_01064at 1130.749 kb on - strandat 1130.784 kb on - strandat 1130.784 kb on - strandat 1130.798 kb on - strandat 1130.921 kb on - strandat 1130.921 kb on - strandat 1130.970 kb on - strandat 1130.985 kb on - strandat 1131.048 kb on - strandat 1131.135 kb on - strand, within MPMX26_01065at 1131.179 kb on - strand, within MPMX26_01065at 1131.311 kb on - strand, within MPMX26_01065at 1131.335 kb on - strand, within MPMX26_01065at 1131.342 kb on - strand, within MPMX26_01065at 1131.342 kb on - strand, within MPMX26_01065at 1131.342 kb on - strand, within MPMX26_01065at 1131.383 kb on - strand, within MPMX26_01065at 1131.437 kb on - strand, within MPMX26_01065at 1131.480 kb on - strand, within MPMX26_01065at 1131.480 kb on - strand, within MPMX26_01065at 1131.480 kb on - strand, within MPMX26_01065at 1131.498 kb on - strand, within MPMX26_01065at 1131.588 kb on - strand, within MPMX26_01065at 1131.605 kb on - strand, within MPMX26_01065at 1131.785 kb on - strand, within MPMX26_01065at 1131.921 kb on - strand, within MPMX26_01065at 1131.930 kb on - strand, within MPMX26_01065at 1131.930 kb on - strand, within MPMX26_01065at 1132.340 kb on - strand, within MPMX26_01065at 1132.340 kb on - strand, within MPMX26_01065at 1132.340 kb on - strand, within MPMX26_01065at 1132.424 kb on - strand, within MPMX26_01065at 1132.527 kb on - strandat 1132.622 kb on - strandat 1132.701 kb on - strandat 1132.701 kb on - strandat 1132.716 kb on - strandat 1132.716 kb on - strandat 1132.716 kb on - strandat 1132.716 kb on - strandat 1132.716 kb on - strandat 1133.105 kb on - strand, within MPMX26_01066

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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1,129,912 - MPMX26_01064 0.53 -0.6
1,129,912 - MPMX26_01064 0.53 +1.5
1,129,951 - MPMX26_01064 0.55 +1.4
1,130,044 - MPMX26_01064 0.59 +0.8
1,130,062 - MPMX26_01064 0.60 +0.8
1,130,063 - MPMX26_01064 0.60 +0.9
1,130,091 - MPMX26_01064 0.61 +1.4
1,130,091 - MPMX26_01064 0.61 +0.7
1,130,091 - MPMX26_01064 0.61 +0.9
1,130,105 - MPMX26_01064 0.62 +1.1
1,130,154 - MPMX26_01064 0.64 -0.4
1,130,166 - MPMX26_01064 0.65 +1.1
1,130,260 - MPMX26_01064 0.69 +1.1
1,130,260 - MPMX26_01064 0.69 +0.8
1,130,308 - MPMX26_01064 0.71 +3.2
1,130,325 - MPMX26_01064 0.72 +1.1
1,130,334 - MPMX26_01064 0.73 +0.9
1,130,346 - MPMX26_01064 0.73 +1.0
1,130,455 - MPMX26_01064 0.78 +0.9
1,130,461 - MPMX26_01064 0.79 +1.0
1,130,476 - MPMX26_01064 0.79 +0.7
1,130,491 - MPMX26_01064 0.80 +2.1
1,130,499 - MPMX26_01064 0.80 +0.9
1,130,506 - MPMX26_01064 0.81 +0.6
1,130,506 - MPMX26_01064 0.81 +0.7
1,130,515 - MPMX26_01064 0.81 +0.9
1,130,533 - MPMX26_01064 0.82 +0.6
1,130,537 - MPMX26_01064 0.82 +0.4
1,130,538 - MPMX26_01064 0.82 +0.9
1,130,538 - MPMX26_01064 0.82 +1.0
1,130,548 - MPMX26_01064 0.83 +1.0
1,130,669 - MPMX26_01064 0.88 +1.0
1,130,671 - MPMX26_01064 0.89 +1.3
1,130,671 - MPMX26_01064 0.89 -0.9
1,130,671 - MPMX26_01064 0.89 +0.9
1,130,671 - MPMX26_01064 0.89 +1.2
1,130,671 - MPMX26_01064 0.89 +1.1
1,130,671 - MPMX26_01064 0.89 +1.1
1,130,671 - MPMX26_01064 0.89 +0.1
1,130,671 - MPMX26_01064 0.89 +1.0
1,130,679 - MPMX26_01064 0.89 +0.5
1,130,749 - +1.0
1,130,784 - +1.2
1,130,784 - -0.0
1,130,798 - +1.0
1,130,921 - +1.2
1,130,921 - +0.4
1,130,970 - +0.3
1,130,985 - -0.2
1,131,048 - +1.0
1,131,135 - MPMX26_01065 0.13 +0.2
1,131,179 - MPMX26_01065 0.15 +0.9
1,131,311 - MPMX26_01065 0.23 +0.0
1,131,335 - MPMX26_01065 0.24 +0.1
1,131,342 - MPMX26_01065 0.25 -0.4
1,131,342 - MPMX26_01065 0.25 -2.2
1,131,342 - MPMX26_01065 0.25 +0.3
1,131,383 - MPMX26_01065 0.27 +0.7
1,131,437 - MPMX26_01065 0.30 +0.6
1,131,480 - MPMX26_01065 0.32 +1.2
1,131,480 - MPMX26_01065 0.32 +1.2
1,131,480 - MPMX26_01065 0.32 +1.3
1,131,498 - MPMX26_01065 0.34 +0.9
1,131,588 - MPMX26_01065 0.39 +0.5
1,131,605 - MPMX26_01065 0.40 +0.6
1,131,785 - MPMX26_01065 0.50 +0.2
1,131,921 - MPMX26_01065 0.58 +0.8
1,131,930 - MPMX26_01065 0.58 -1.2
1,131,930 - MPMX26_01065 0.58 +2.1
1,132,340 - MPMX26_01065 0.81 +1.0
1,132,340 - MPMX26_01065 0.81 +0.2
1,132,340 - MPMX26_01065 0.81 +0.1
1,132,424 - MPMX26_01065 0.86 +1.5
1,132,527 - +0.8
1,132,622 - +0.1
1,132,701 - +0.0
1,132,701 - -0.4
1,132,716 - -0.0
1,132,716 - +0.5
1,132,716 - -0.2
1,132,716 - +1.0
1,132,716 - +0.5
1,133,105 - MPMX26_01066 0.42 +0.6

Or see this region's nucleotide sequence