Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01052

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01051 and MPMX26_01052 are separated by 118 nucleotidesMPMX26_01052 and MPMX26_01053 are separated by 160 nucleotidesMPMX26_01053 and MPMX26_01054 are separated by 106 nucleotides MPMX26_01051: MPMX26_01051 - D-alanyl-D-alanine carboxypeptidase DacA, at 1,114,894 to 1,116,042 _01051 MPMX26_01052: MPMX26_01052 - hypothetical protein, at 1,116,161 to 1,116,559 _01052 MPMX26_01053: MPMX26_01053 - hypothetical protein, at 1,116,720 to 1,117,091 _01053 MPMX26_01054: MPMX26_01054 - 5'-nucleotidase SurE, at 1,117,198 to 1,117,971 _01054 Position (kb) 1116 1117Strain fitness (log2 ratio) -2 -1 0 1at 1115.175 kb on - strand, within MPMX26_01051at 1115.193 kb on - strand, within MPMX26_01051at 1115.204 kb on - strand, within MPMX26_01051at 1115.204 kb on - strand, within MPMX26_01051at 1115.212 kb on - strand, within MPMX26_01051at 1115.245 kb on - strand, within MPMX26_01051at 1115.248 kb on - strand, within MPMX26_01051at 1115.258 kb on - strand, within MPMX26_01051at 1115.258 kb on - strand, within MPMX26_01051at 1115.265 kb on - strand, within MPMX26_01051at 1115.265 kb on - strand, within MPMX26_01051at 1115.265 kb on - strand, within MPMX26_01051at 1115.265 kb on - strand, within MPMX26_01051at 1115.265 kb on - strand, within MPMX26_01051at 1115.265 kb on - strand, within MPMX26_01051at 1115.265 kb on - strand, within MPMX26_01051at 1115.265 kb on - strand, within MPMX26_01051at 1115.265 kb on - strand, within MPMX26_01051at 1115.265 kb on - strand, within MPMX26_01051at 1115.289 kb on - strand, within MPMX26_01051at 1115.299 kb on - strand, within MPMX26_01051at 1115.321 kb on - strand, within MPMX26_01051at 1115.332 kb on - strand, within MPMX26_01051at 1115.352 kb on - strand, within MPMX26_01051at 1115.355 kb on - strand, within MPMX26_01051at 1115.361 kb on - strand, within MPMX26_01051at 1115.391 kb on - strand, within MPMX26_01051at 1115.391 kb on - strand, within MPMX26_01051at 1115.391 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.407 kb on - strand, within MPMX26_01051at 1115.412 kb on - strand, within MPMX26_01051at 1115.417 kb on - strand, within MPMX26_01051at 1115.417 kb on - strand, within MPMX26_01051at 1115.419 kb on - strand, within MPMX26_01051at 1115.425 kb on - strand, within MPMX26_01051at 1115.425 kb on - strand, within MPMX26_01051at 1115.425 kb on - strand, within MPMX26_01051at 1115.425 kb on - strand, within MPMX26_01051at 1115.425 kb on - strand, within MPMX26_01051at 1115.425 kb on - strand, within MPMX26_01051at 1115.425 kb on - strand, within MPMX26_01051at 1115.425 kb on - strand, within MPMX26_01051at 1115.425 kb on - strand, within MPMX26_01051at 1115.425 kb on - strand, within MPMX26_01051at 1115.425 kb on - strand, within MPMX26_01051at 1115.425 kb on - strand, within MPMX26_01051at 1115.435 kb on - strand, within MPMX26_01051at 1115.483 kb on - strand, within MPMX26_01051at 1115.483 kb on - strand, within MPMX26_01051at 1115.483 kb on - strand, within MPMX26_01051at 1115.483 kb on - strand, within MPMX26_01051at 1115.483 kb on - strand, within MPMX26_01051at 1115.493 kb on - strand, within MPMX26_01051at 1115.500 kb on - strand, within MPMX26_01051at 1115.510 kb on - strand, within MPMX26_01051at 1115.515 kb on - strand, within MPMX26_01051at 1115.628 kb on - strand, within MPMX26_01051at 1115.655 kb on - strand, within MPMX26_01051at 1115.662 kb on - strand, within MPMX26_01051at 1115.696 kb on - strand, within MPMX26_01051at 1115.759 kb on - strand, within MPMX26_01051at 1115.759 kb on - strand, within MPMX26_01051at 1115.759 kb on - strand, within MPMX26_01051at 1115.759 kb on - strand, within MPMX26_01051at 1115.778 kb on - strand, within MPMX26_01051at 1115.788 kb on - strand, within MPMX26_01051at 1115.820 kb on - strand, within MPMX26_01051at 1115.884 kb on - strand, within MPMX26_01051at 1115.914 kb on - strand, within MPMX26_01051at 1115.918 kb on - strand, within MPMX26_01051at 1115.919 kb on - strand, within MPMX26_01051at 1115.929 kb on - strandat 1115.929 kb on - strandat 1115.940 kb on - strandat 1115.945 kb on - strandat 1115.961 kb on - strandat 1115.977 kb on - strandat 1115.979 kb on - strandat 1115.979 kb on - strandat 1115.979 kb on - strandat 1115.987 kb on - strandat 1115.993 kb on - strandat 1116.013 kb on - strandat 1116.018 kb on - strandat 1116.018 kb on - strandat 1116.018 kb on - strandat 1116.018 kb on - strandat 1116.018 kb on - strandat 1116.250 kb on - strand, within MPMX26_01052at 1116.250 kb on - strand, within MPMX26_01052at 1116.250 kb on - strand, within MPMX26_01052at 1116.295 kb on - strand, within MPMX26_01052at 1116.319 kb on - strand, within MPMX26_01052at 1116.341 kb on - strand, within MPMX26_01052at 1116.343 kb on - strand, within MPMX26_01052at 1116.343 kb on - strand, within MPMX26_01052at 1116.343 kb on - strand, within MPMX26_01052at 1116.371 kb on - strand, within MPMX26_01052at 1116.371 kb on - strand, within MPMX26_01052at 1116.371 kb on - strand, within MPMX26_01052at 1116.514 kb on - strand, within MPMX26_01052at 1116.514 kb on - strand, within MPMX26_01052at 1116.532 kb on - strandat 1116.737 kb on - strandat 1116.737 kb on - strandat 1116.737 kb on - strandat 1116.737 kb on - strandat 1116.737 kb on - strandat 1116.792 kb on - strand, within MPMX26_01053at 1116.816 kb on - strand, within MPMX26_01053at 1116.816 kb on - strand, within MPMX26_01053at 1116.816 kb on - strand, within MPMX26_01053at 1116.903 kb on + strand, within MPMX26_01053at 1116.911 kb on - strand, within MPMX26_01053at 1116.981 kb on - strand, within MPMX26_01053at 1117.011 kb on - strand, within MPMX26_01053at 1117.011 kb on - strand, within MPMX26_01053at 1117.016 kb on - strand, within MPMX26_01053at 1117.040 kb on - strand, within MPMX26_01053at 1117.058 kb on - strandat 1117.058 kb on - strandat 1117.067 kb on - strandat 1117.067 kb on - strandat 1117.225 kb on + strandat 1117.270 kb on + strandat 1117.270 kb on + strandat 1117.270 kb on + strandat 1117.270 kb on + strandat 1117.270 kb on + strandat 1117.270 kb on + strandat 1117.270 kb on + strandat 1117.270 kb on + strandat 1117.270 kb on + strandat 1117.270 kb on + strandat 1117.270 kb on + strandat 1117.270 kb on + strandat 1117.270 kb on + strandat 1117.270 kb on + strandat 1117.333 kb on + strand, within MPMX26_01054at 1117.333 kb on + strand, within MPMX26_01054at 1117.333 kb on + strand, within MPMX26_01054at 1117.333 kb on + strand, within MPMX26_01054at 1117.333 kb on + strand, within MPMX26_01054at 1117.333 kb on + strand, within MPMX26_01054at 1117.338 kb on + strand, within MPMX26_01054at 1117.352 kb on + strand, within MPMX26_01054at 1117.374 kb on + strand, within MPMX26_01054at 1117.384 kb on + strand, within MPMX26_01054at 1117.384 kb on + strand, within MPMX26_01054at 1117.384 kb on + strand, within MPMX26_01054at 1117.384 kb on + strand, within MPMX26_01054at 1117.389 kb on + strand, within MPMX26_01054at 1117.396 kb on + strand, within MPMX26_01054at 1117.396 kb on + strand, within MPMX26_01054at 1117.406 kb on + strand, within MPMX26_01054at 1117.462 kb on + strand, within MPMX26_01054at 1117.492 kb on + strand, within MPMX26_01054at 1117.495 kb on + strand, within MPMX26_01054

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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1,115,175 - MPMX26_01051 0.24 +1.2
1,115,193 - MPMX26_01051 0.26 -0.4
1,115,204 - MPMX26_01051 0.27 -1.0
1,115,204 - MPMX26_01051 0.27 +0.6
1,115,212 - MPMX26_01051 0.28 -0.3
1,115,245 - MPMX26_01051 0.31 -0.0
1,115,248 - MPMX26_01051 0.31 +0.4
1,115,258 - MPMX26_01051 0.32 -2.3
1,115,258 - MPMX26_01051 0.32 +0.1
1,115,265 - MPMX26_01051 0.32 +0.0
1,115,265 - MPMX26_01051 0.32 +0.2
1,115,265 - MPMX26_01051 0.32 +0.1
1,115,265 - MPMX26_01051 0.32 +0.6
1,115,265 - MPMX26_01051 0.32 +0.2
1,115,265 - MPMX26_01051 0.32 -0.2
1,115,265 - MPMX26_01051 0.32 +1.4
1,115,265 - MPMX26_01051 0.32 -0.5
1,115,265 - MPMX26_01051 0.32 -0.1
1,115,265 - MPMX26_01051 0.32 -0.5
1,115,289 - MPMX26_01051 0.34 -0.6
1,115,299 - MPMX26_01051 0.35 -0.6
1,115,321 - MPMX26_01051 0.37 -0.3
1,115,332 - MPMX26_01051 0.38 -0.2
1,115,352 - MPMX26_01051 0.40 -0.0
1,115,355 - MPMX26_01051 0.40 -0.7
1,115,361 - MPMX26_01051 0.41 +0.5
1,115,391 - MPMX26_01051 0.43 +0.8
1,115,391 - MPMX26_01051 0.43 -0.3
1,115,391 - MPMX26_01051 0.43 +0.3
1,115,407 - MPMX26_01051 0.45 -0.3
1,115,407 - MPMX26_01051 0.45 +0.4
1,115,407 - MPMX26_01051 0.45 -0.3
1,115,407 - MPMX26_01051 0.45 -0.7
1,115,407 - MPMX26_01051 0.45 +0.7
1,115,407 - MPMX26_01051 0.45 -0.1
1,115,407 - MPMX26_01051 0.45 -0.2
1,115,407 - MPMX26_01051 0.45 -0.2
1,115,407 - MPMX26_01051 0.45 +0.1
1,115,407 - MPMX26_01051 0.45 -0.3
1,115,407 - MPMX26_01051 0.45 +0.8
1,115,407 - MPMX26_01051 0.45 -0.6
1,115,407 - MPMX26_01051 0.45 +0.0
1,115,407 - MPMX26_01051 0.45 -0.5
1,115,407 - MPMX26_01051 0.45 -0.2
1,115,407 - MPMX26_01051 0.45 -0.4
1,115,407 - MPMX26_01051 0.45 +0.7
1,115,407 - MPMX26_01051 0.45 -0.1
1,115,407 - MPMX26_01051 0.45 +0.9
1,115,407 - MPMX26_01051 0.45 -0.7
1,115,407 - MPMX26_01051 0.45 +0.1
1,115,407 - MPMX26_01051 0.45 +0.7
1,115,407 - MPMX26_01051 0.45 -0.2
1,115,407 - MPMX26_01051 0.45 -0.2
1,115,407 - MPMX26_01051 0.45 +0.1
1,115,407 - MPMX26_01051 0.45 -0.3
1,115,407 - MPMX26_01051 0.45 -0.4
1,115,407 - MPMX26_01051 0.45 -1.2
1,115,407 - MPMX26_01051 0.45 -0.1
1,115,407 - MPMX26_01051 0.45 -0.5
1,115,407 - MPMX26_01051 0.45 +0.0
1,115,407 - MPMX26_01051 0.45 -0.1
1,115,407 - MPMX26_01051 0.45 +0.1
1,115,407 - MPMX26_01051 0.45 -0.8
1,115,407 - MPMX26_01051 0.45 +0.6
1,115,407 - MPMX26_01051 0.45 -0.1
1,115,407 - MPMX26_01051 0.45 +0.0
1,115,407 - MPMX26_01051 0.45 -0.2
1,115,407 - MPMX26_01051 0.45 +0.1
1,115,407 - MPMX26_01051 0.45 +0.2
1,115,407 - MPMX26_01051 0.45 +0.4
1,115,407 - MPMX26_01051 0.45 +0.1
1,115,407 - MPMX26_01051 0.45 +0.0
1,115,412 - MPMX26_01051 0.45 -0.0
1,115,417 - MPMX26_01051 0.46 -0.3
1,115,417 - MPMX26_01051 0.46 +0.6
1,115,419 - MPMX26_01051 0.46 +0.0
1,115,425 - MPMX26_01051 0.46 +1.0
1,115,425 - MPMX26_01051 0.46 +0.3
1,115,425 - MPMX26_01051 0.46 +0.5
1,115,425 - MPMX26_01051 0.46 -1.0
1,115,425 - MPMX26_01051 0.46 +0.2
1,115,425 - MPMX26_01051 0.46 -0.6
1,115,425 - MPMX26_01051 0.46 -0.3
1,115,425 - MPMX26_01051 0.46 -0.4
1,115,425 - MPMX26_01051 0.46 +0.0
1,115,425 - MPMX26_01051 0.46 -0.1
1,115,425 - MPMX26_01051 0.46 +0.7
1,115,425 - MPMX26_01051 0.46 +0.3
1,115,435 - MPMX26_01051 0.47 +0.6
1,115,483 - MPMX26_01051 0.51 -0.5
1,115,483 - MPMX26_01051 0.51 +0.2
1,115,483 - MPMX26_01051 0.51 +0.2
1,115,483 - MPMX26_01051 0.51 -0.2
1,115,483 - MPMX26_01051 0.51 -0.4
1,115,493 - MPMX26_01051 0.52 -0.4
1,115,500 - MPMX26_01051 0.53 -0.5
1,115,510 - MPMX26_01051 0.54 -0.7
1,115,515 - MPMX26_01051 0.54 -0.1
1,115,628 - MPMX26_01051 0.64 +0.0
1,115,655 - MPMX26_01051 0.66 +0.5
1,115,662 - MPMX26_01051 0.67 -0.0
1,115,696 - MPMX26_01051 0.70 -0.3
1,115,759 - MPMX26_01051 0.75 +0.6
1,115,759 - MPMX26_01051 0.75 +0.1
1,115,759 - MPMX26_01051 0.75 -0.7
1,115,759 - MPMX26_01051 0.75 +0.1
1,115,778 - MPMX26_01051 0.77 -0.1
1,115,788 - MPMX26_01051 0.78 -0.1
1,115,820 - MPMX26_01051 0.81 -0.1
1,115,884 - MPMX26_01051 0.86 -0.1
1,115,914 - MPMX26_01051 0.89 +0.3
1,115,918 - MPMX26_01051 0.89 +0.0
1,115,919 - MPMX26_01051 0.89 -1.6
1,115,929 - -0.2
1,115,929 - +0.3
1,115,940 - -0.6
1,115,945 - +0.5
1,115,961 - -0.2
1,115,977 - -0.1
1,115,979 - -0.9
1,115,979 - -0.2
1,115,979 - +0.3
1,115,987 - -0.7
1,115,993 - -0.3
1,116,013 - +0.5
1,116,018 - +0.3
1,116,018 - -0.2
1,116,018 - -0.2
1,116,018 - -0.2
1,116,018 - -0.3
1,116,250 - MPMX26_01052 0.22 -0.6
1,116,250 - MPMX26_01052 0.22 +0.1
1,116,250 - MPMX26_01052 0.22 +0.3
1,116,295 - MPMX26_01052 0.34 -0.7
1,116,319 - MPMX26_01052 0.40 +0.1
1,116,341 - MPMX26_01052 0.45 +0.5
1,116,343 - MPMX26_01052 0.46 -0.3
1,116,343 - MPMX26_01052 0.46 -0.3
1,116,343 - MPMX26_01052 0.46 -0.1
1,116,371 - MPMX26_01052 0.53 -0.5
1,116,371 - MPMX26_01052 0.53 -0.6
1,116,371 - MPMX26_01052 0.53 -0.0
1,116,514 - MPMX26_01052 0.88 -1.0
1,116,514 - MPMX26_01052 0.88 +0.4
1,116,532 - -0.0
1,116,737 - -0.1
1,116,737 - +0.6
1,116,737 - -0.0
1,116,737 - -0.3
1,116,737 - -0.1
1,116,792 - MPMX26_01053 0.19 -0.6
1,116,816 - MPMX26_01053 0.26 -0.1
1,116,816 - MPMX26_01053 0.26 +0.5
1,116,816 - MPMX26_01053 0.26 +0.1
1,116,903 + MPMX26_01053 0.49 +0.2
1,116,911 - MPMX26_01053 0.51 -0.8
1,116,981 - MPMX26_01053 0.70 -0.7
1,117,011 - MPMX26_01053 0.78 +0.1
1,117,011 - MPMX26_01053 0.78 +0.1
1,117,016 - MPMX26_01053 0.80 -0.1
1,117,040 - MPMX26_01053 0.86 +0.5
1,117,058 - +0.4
1,117,058 - +0.8
1,117,067 - +0.2
1,117,067 - +0.8
1,117,225 + -0.7
1,117,270 + -0.1
1,117,270 + +1.1
1,117,270 + +0.0
1,117,270 + -0.5
1,117,270 + +0.6
1,117,270 + -0.4
1,117,270 + +0.2
1,117,270 + +0.3
1,117,270 + +0.4
1,117,270 + +0.1
1,117,270 + -0.2
1,117,270 + +0.2
1,117,270 + -0.7
1,117,270 + +0.2
1,117,333 + MPMX26_01054 0.17 -0.1
1,117,333 + MPMX26_01054 0.17 +0.5
1,117,333 + MPMX26_01054 0.17 -1.0
1,117,333 + MPMX26_01054 0.17 -0.2
1,117,333 + MPMX26_01054 0.17 -0.6
1,117,333 + MPMX26_01054 0.17 +0.2
1,117,338 + MPMX26_01054 0.18 -0.6
1,117,352 + MPMX26_01054 0.20 +1.6
1,117,374 + MPMX26_01054 0.23 +0.1
1,117,384 + MPMX26_01054 0.24 -0.1
1,117,384 + MPMX26_01054 0.24 +0.6
1,117,384 + MPMX26_01054 0.24 -0.8
1,117,384 + MPMX26_01054 0.24 +0.0
1,117,389 + MPMX26_01054 0.25 +0.1
1,117,396 + MPMX26_01054 0.26 -0.1
1,117,396 + MPMX26_01054 0.26 +0.3
1,117,406 + MPMX26_01054 0.27 +1.1
1,117,462 + MPMX26_01054 0.34 -0.2
1,117,492 + MPMX26_01054 0.38 -0.0
1,117,495 + MPMX26_01054 0.38 +0.5

Or see this region's nucleotide sequence