Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01038

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01037 and MPMX26_01038 are separated by 810 nucleotidesMPMX26_01038 and MPMX26_01039 are separated by 100 nucleotides MPMX26_01037: MPMX26_01037 - Aromatic amino acid transport protein AroP, at 1,098,793 to 1,100,175 _01037 MPMX26_01038: MPMX26_01038 - Phosphate-binding protein PstS, at 1,100,986 to 1,102,017 _01038 MPMX26_01039: MPMX26_01039 - hypothetical protein, at 1,102,118 to 1,103,497 _01039 Position (kb) 1100 1101 1102 1103Strain fitness (log2 ratio) -2 -1 0 1 2at 1100.878 kb on + strandat 1101.441 kb on + strand, within MPMX26_01038at 1101.441 kb on + strand, within MPMX26_01038at 1101.651 kb on + strand, within MPMX26_01038at 1101.660 kb on + strand, within MPMX26_01038at 1101.739 kb on + strand, within MPMX26_01038at 1101.773 kb on + strand, within MPMX26_01038at 1101.817 kb on + strand, within MPMX26_01038at 1101.831 kb on + strand, within MPMX26_01038at 1101.847 kb on + strand, within MPMX26_01038at 1101.855 kb on + strand, within MPMX26_01038at 1101.877 kb on + strand, within MPMX26_01038at 1101.943 kb on + strandat 1101.957 kb on + strandat 1101.990 kb on + strandat 1101.999 kb on + strandat 1102.258 kb on + strand, within MPMX26_01039at 1102.262 kb on + strand, within MPMX26_01039at 1102.306 kb on + strand, within MPMX26_01039at 1102.333 kb on + strand, within MPMX26_01039at 1102.373 kb on + strand, within MPMX26_01039at 1102.373 kb on + strand, within MPMX26_01039at 1102.373 kb on + strand, within MPMX26_01039at 1102.375 kb on + strand, within MPMX26_01039at 1102.406 kb on + strand, within MPMX26_01039at 1102.411 kb on + strand, within MPMX26_01039at 1102.411 kb on + strand, within MPMX26_01039at 1102.457 kb on + strand, within MPMX26_01039at 1102.475 kb on + strand, within MPMX26_01039at 1102.550 kb on + strand, within MPMX26_01039at 1102.550 kb on + strand, within MPMX26_01039at 1102.550 kb on + strand, within MPMX26_01039at 1102.550 kb on + strand, within MPMX26_01039at 1102.550 kb on + strand, within MPMX26_01039at 1102.555 kb on + strand, within MPMX26_01039at 1102.585 kb on + strand, within MPMX26_01039at 1102.585 kb on + strand, within MPMX26_01039at 1102.745 kb on + strand, within MPMX26_01039at 1102.807 kb on + strand, within MPMX26_01039at 1102.807 kb on + strand, within MPMX26_01039at 1102.807 kb on + strand, within MPMX26_01039at 1102.807 kb on + strand, within MPMX26_01039at 1102.807 kb on + strand, within MPMX26_01039at 1102.807 kb on + strand, within MPMX26_01039at 1102.807 kb on + strand, within MPMX26_01039at 1102.807 kb on + strand, within MPMX26_01039at 1102.807 kb on + strand, within MPMX26_01039at 1102.820 kb on + strand, within MPMX26_01039at 1102.820 kb on + strand, within MPMX26_01039at 1102.820 kb on + strand, within MPMX26_01039at 1102.820 kb on + strand, within MPMX26_01039at 1102.820 kb on + strand, within MPMX26_01039at 1102.825 kb on + strand, within MPMX26_01039at 1102.931 kb on + strand, within MPMX26_01039at 1102.970 kb on + strand, within MPMX26_01039at 1102.999 kb on + strand, within MPMX26_01039

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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1,100,878 + -0.4
1,101,441 + MPMX26_01038 0.44 -0.9
1,101,441 + MPMX26_01038 0.44 -0.2
1,101,651 + MPMX26_01038 0.64 -1.2
1,101,660 + MPMX26_01038 0.65 -1.2
1,101,739 + MPMX26_01038 0.73 -0.3
1,101,773 + MPMX26_01038 0.76 -0.2
1,101,817 + MPMX26_01038 0.81 -0.4
1,101,831 + MPMX26_01038 0.82 +0.6
1,101,847 + MPMX26_01038 0.83 -0.9
1,101,855 + MPMX26_01038 0.84 -0.7
1,101,877 + MPMX26_01038 0.86 -0.9
1,101,943 + -0.9
1,101,957 + +1.6
1,101,990 + +0.5
1,101,999 + +0.1
1,102,258 + MPMX26_01039 0.10 +0.3
1,102,262 + MPMX26_01039 0.10 -0.1
1,102,306 + MPMX26_01039 0.14 -0.0
1,102,333 + MPMX26_01039 0.16 -0.9
1,102,373 + MPMX26_01039 0.18 +1.3
1,102,373 + MPMX26_01039 0.18 +0.4
1,102,373 + MPMX26_01039 0.18 -0.1
1,102,375 + MPMX26_01039 0.19 -1.4
1,102,406 + MPMX26_01039 0.21 -0.0
1,102,411 + MPMX26_01039 0.21 +0.1
1,102,411 + MPMX26_01039 0.21 -0.2
1,102,457 + MPMX26_01039 0.25 -0.1
1,102,475 + MPMX26_01039 0.26 -0.4
1,102,550 + MPMX26_01039 0.31 -0.2
1,102,550 + MPMX26_01039 0.31 -0.4
1,102,550 + MPMX26_01039 0.31 -1.3
1,102,550 + MPMX26_01039 0.31 +0.1
1,102,550 + MPMX26_01039 0.31 +0.2
1,102,555 + MPMX26_01039 0.32 +1.6
1,102,585 + MPMX26_01039 0.34 +2.4
1,102,585 + MPMX26_01039 0.34 -0.6
1,102,745 + MPMX26_01039 0.45 +0.2
1,102,807 + MPMX26_01039 0.50 -1.0
1,102,807 + MPMX26_01039 0.50 -0.6
1,102,807 + MPMX26_01039 0.50 -0.4
1,102,807 + MPMX26_01039 0.50 -2.0
1,102,807 + MPMX26_01039 0.50 -0.8
1,102,807 + MPMX26_01039 0.50 -0.7
1,102,807 + MPMX26_01039 0.50 +2.4
1,102,807 + MPMX26_01039 0.50 +0.4
1,102,807 + MPMX26_01039 0.50 -0.7
1,102,820 + MPMX26_01039 0.51 -0.4
1,102,820 + MPMX26_01039 0.51 -0.7
1,102,820 + MPMX26_01039 0.51 -0.5
1,102,820 + MPMX26_01039 0.51 -0.2
1,102,820 + MPMX26_01039 0.51 +0.2
1,102,825 + MPMX26_01039 0.51 -0.8
1,102,931 + MPMX26_01039 0.59 -0.6
1,102,970 + MPMX26_01039 0.62 -1.7
1,102,999 + MPMX26_01039 0.64 +0.3

Or see this region's nucleotide sequence