Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00853

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00852 and MPMX26_00853 are separated by 57 nucleotidesMPMX26_00853 and MPMX26_00854 are separated by 11 nucleotidesMPMX26_00854 and MPMX26_00855 are separated by 289 nucleotides MPMX26_00852: MPMX26_00852 - GABA permease, at 897,203 to 898,642 _00852 MPMX26_00853: MPMX26_00853 - Gamma-glutamylputrescine oxidoreductase, at 898,700 to 900,136 _00853 MPMX26_00854: MPMX26_00854 - hypothetical protein, at 900,148 to 900,543 _00854 MPMX26_00855: MPMX26_00855 - HTH-type transcriptional regulator TauR, at 900,833 to 902,326 _00855 Position (kb) 898 899 900 901Strain fitness (log2 ratio) -1 0 1at 898.936 kb on - strand, within MPMX26_00853at 898.971 kb on - strand, within MPMX26_00853at 900.041 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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898,936 - MPMX26_00853 0.16 -1.6
898,971 - MPMX26_00853 0.19 -0.3
900,041 - +0.1

Or see this region's nucleotide sequence