Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00766

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00764 and MPMX26_00765 are separated by 125 nucleotidesMPMX26_00765 and MPMX26_00766 are separated by 90 nucleotidesMPMX26_00766 and MPMX26_00767 are separated by 15 nucleotides MPMX26_00764: MPMX26_00764 - Chloramphenicol acetyltransferase, at 808,378 to 808,998 _00764 MPMX26_00765: MPMX26_00765 - Transcription elongation factor GreA, at 809,124 to 809,600 _00765 MPMX26_00766: MPMX26_00766 - Carbamoyl-phosphate synthase large chain, at 809,691 to 812,921 _00766 MPMX26_00767: MPMX26_00767 - Carbamoyl-phosphate synthase small chain, at 812,937 to 814,076 _00767 Position (kb) 809 810 811 812 813Strain fitness (log2 ratio) -1 0 1 2at 808.738 kb on - strand, within MPMX26_00764at 808.738 kb on - strand, within MPMX26_00764at 808.743 kb on - strand, within MPMX26_00764at 808.743 kb on - strand, within MPMX26_00764at 808.743 kb on - strand, within MPMX26_00764at 808.756 kb on - strand, within MPMX26_00764at 808.804 kb on - strand, within MPMX26_00764at 808.852 kb on - strand, within MPMX26_00764at 808.878 kb on - strand, within MPMX26_00764at 808.945 kb on - strandat 808.974 kb on - strandat 808.974 kb on - strandat 808.987 kb on - strandat 809.027 kb on - strandat 809.109 kb on - strandat 809.140 kb on - strandat 809.164 kb on - strandat 809.166 kb on - strandat 809.171 kb on - strandat 809.171 kb on - strandat 809.171 kb on - strandat 809.172 kb on - strand, within MPMX26_00765at 809.228 kb on - strand, within MPMX26_00765at 809.230 kb on - strand, within MPMX26_00765at 809.305 kb on - strand, within MPMX26_00765at 809.335 kb on - strand, within MPMX26_00765at 809.350 kb on - strand, within MPMX26_00765at 809.365 kb on - strand, within MPMX26_00765at 809.374 kb on - strand, within MPMX26_00765at 809.374 kb on - strand, within MPMX26_00765at 809.389 kb on - strand, within MPMX26_00765at 809.389 kb on - strand, within MPMX26_00765at 809.392 kb on - strand, within MPMX26_00765at 809.394 kb on - strand, within MPMX26_00765at 809.422 kb on - strand, within MPMX26_00765at 809.422 kb on - strand, within MPMX26_00765at 809.422 kb on - strand, within MPMX26_00765at 809.428 kb on - strand, within MPMX26_00765at 809.435 kb on - strand, within MPMX26_00765at 809.460 kb on - strand, within MPMX26_00765at 809.462 kb on - strand, within MPMX26_00765at 809.486 kb on - strand, within MPMX26_00765at 809.517 kb on - strand, within MPMX26_00765at 809.541 kb on - strand, within MPMX26_00765at 809.552 kb on - strand, within MPMX26_00765at 809.595 kb on - strandat 809.595 kb on - strandat 809.615 kb on - strandat 809.696 kb on - strandat 809.696 kb on - strandat 809.756 kb on - strandat 809.757 kb on - strandat 810.062 kb on - strand, within MPMX26_00766at 810.134 kb on - strand, within MPMX26_00766at 810.314 kb on - strand, within MPMX26_00766at 810.324 kb on - strand, within MPMX26_00766at 810.416 kb on - strand, within MPMX26_00766at 810.638 kb on - strand, within MPMX26_00766at 810.854 kb on - strand, within MPMX26_00766at 811.024 kb on - strand, within MPMX26_00766at 811.125 kb on - strand, within MPMX26_00766at 811.228 kb on - strand, within MPMX26_00766at 811.272 kb on - strand, within MPMX26_00766at 811.347 kb on - strand, within MPMX26_00766at 811.349 kb on - strand, within MPMX26_00766at 812.538 kb on - strand, within MPMX26_00766at 813.007 kb on - strandat 813.081 kb on - strand, within MPMX26_00767at 813.169 kb on - strand, within MPMX26_00767at 813.229 kb on - strand, within MPMX26_00767at 813.271 kb on - strand, within MPMX26_00767at 813.424 kb on - strand, within MPMX26_00767at 813.529 kb on - strand, within MPMX26_00767at 813.531 kb on - strand, within MPMX26_00767at 813.605 kb on - strand, within MPMX26_00767at 813.605 kb on - strand, within MPMX26_00767at 813.605 kb on - strand, within MPMX26_00767

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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808,738 - MPMX26_00764 0.58 +2.2
808,738 - MPMX26_00764 0.58 +0.8
808,743 - MPMX26_00764 0.59 +0.6
808,743 - MPMX26_00764 0.59 +0.1
808,743 - MPMX26_00764 0.59 -0.4
808,756 - MPMX26_00764 0.61 -0.6
808,804 - MPMX26_00764 0.69 +0.1
808,852 - MPMX26_00764 0.76 -0.4
808,878 - MPMX26_00764 0.81 +1.3
808,945 - +0.3
808,974 - -0.3
808,974 - -0.0
808,987 - -0.2
809,027 - +0.5
809,109 - +0.8
809,140 - -0.2
809,164 - +0.2
809,166 - -1.6
809,171 - -0.0
809,171 - -0.2
809,171 - +0.0
809,172 - MPMX26_00765 0.10 +0.1
809,228 - MPMX26_00765 0.22 -0.1
809,230 - MPMX26_00765 0.22 -0.3
809,305 - MPMX26_00765 0.38 -0.4
809,335 - MPMX26_00765 0.44 +0.1
809,350 - MPMX26_00765 0.47 +0.1
809,365 - MPMX26_00765 0.51 -0.2
809,374 - MPMX26_00765 0.52 -0.5
809,374 - MPMX26_00765 0.52 +0.0
809,389 - MPMX26_00765 0.56 +1.6
809,389 - MPMX26_00765 0.56 -0.5
809,392 - MPMX26_00765 0.56 -0.1
809,394 - MPMX26_00765 0.57 +0.4
809,422 - MPMX26_00765 0.62 -0.1
809,422 - MPMX26_00765 0.62 -0.3
809,422 - MPMX26_00765 0.62 +0.2
809,428 - MPMX26_00765 0.64 -0.1
809,435 - MPMX26_00765 0.65 +0.4
809,460 - MPMX26_00765 0.70 -0.7
809,462 - MPMX26_00765 0.71 -0.1
809,486 - MPMX26_00765 0.76 -0.6
809,517 - MPMX26_00765 0.82 -0.4
809,541 - MPMX26_00765 0.87 -0.2
809,552 - MPMX26_00765 0.90 -0.2
809,595 - +0.3
809,595 - -0.5
809,615 - +0.2
809,696 - -0.5
809,696 - -0.2
809,756 - -0.6
809,757 - -0.8
810,062 - MPMX26_00766 0.11 -0.4
810,134 - MPMX26_00766 0.14 -1.2
810,314 - MPMX26_00766 0.19 +1.6
810,324 - MPMX26_00766 0.20 -0.4
810,416 - MPMX26_00766 0.22 -0.7
810,638 - MPMX26_00766 0.29 +0.1
810,854 - MPMX26_00766 0.36 -0.4
811,024 - MPMX26_00766 0.41 +0.1
811,125 - MPMX26_00766 0.44 +0.1
811,228 - MPMX26_00766 0.48 -0.7
811,272 - MPMX26_00766 0.49 +0.1
811,347 - MPMX26_00766 0.51 -0.4
811,349 - MPMX26_00766 0.51 +1.6
812,538 - MPMX26_00766 0.88 -0.4
813,007 - +0.1
813,081 - MPMX26_00767 0.13 +0.1
813,169 - MPMX26_00767 0.20 -1.2
813,229 - MPMX26_00767 0.26 +0.1
813,271 - MPMX26_00767 0.29 -1.7
813,424 - MPMX26_00767 0.43 +1.6
813,529 - MPMX26_00767 0.52 +0.1
813,531 - MPMX26_00767 0.52 +0.6
813,605 - MPMX26_00767 0.59 -0.4
813,605 - MPMX26_00767 0.59 -0.9
813,605 - MPMX26_00767 0.59 +1.6

Or see this region's nucleotide sequence