Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00739

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00737 and MPMX26_00738 are separated by 136 nucleotidesMPMX26_00738 and MPMX26_00739 are separated by 1 nucleotidesMPMX26_00739 and MPMX26_00740 are separated by 445 nucleotidesMPMX26_00740 and MPMX26_00741 are separated by 80 nucleotides MPMX26_00737: MPMX26_00737 - SsrA-binding protein, at 776,246 to 776,728 _00737 MPMX26_00738: MPMX26_00738 - Phosphopantetheine adenylyltransferase, at 776,865 to 777,356 _00738 MPMX26_00739: MPMX26_00739 - Ferredoxin, at 777,358 to 777,621 _00739 MPMX26_00740: MPMX26_00740 - tRNA-Met, at 778,067 to 778,143 _00740 MPMX26_00741: MPMX26_00741 - hypothetical protein, at 778,224 to 778,628 _00741 Position (kb) 777 778Strain fitness (log2 ratio) -2 -1 0 1at 776.359 kb on - strand, within MPMX26_00737at 776.383 kb on - strand, within MPMX26_00737at 776.383 kb on - strand, within MPMX26_00737at 776.383 kb on - strand, within MPMX26_00737at 776.383 kb on - strand, within MPMX26_00737at 776.383 kb on - strand, within MPMX26_00737at 776.383 kb on - strand, within MPMX26_00737at 776.383 kb on - strand, within MPMX26_00737at 776.383 kb on - strand, within MPMX26_00737at 776.398 kb on - strand, within MPMX26_00737at 776.398 kb on - strand, within MPMX26_00737at 776.398 kb on - strand, within MPMX26_00737at 776.398 kb on - strand, within MPMX26_00737at 776.398 kb on - strand, within MPMX26_00737at 776.398 kb on - strand, within MPMX26_00737at 776.398 kb on - strand, within MPMX26_00737at 776.398 kb on - strand, within MPMX26_00737at 776.398 kb on - strand, within MPMX26_00737at 776.398 kb on - strand, within MPMX26_00737at 776.398 kb on - strand, within MPMX26_00737at 776.398 kb on - strand, within MPMX26_00737at 776.398 kb on - strand, within MPMX26_00737at 776.398 kb on - strand, within MPMX26_00737at 776.398 kb on - strand, within MPMX26_00737at 776.398 kb on - strand, within MPMX26_00737at 776.398 kb on - strand, within MPMX26_00737at 776.398 kb on - strand, within MPMX26_00737at 776.398 kb on - strand, within MPMX26_00737at 776.398 kb on - strand, within MPMX26_00737at 776.398 kb on - strand, within MPMX26_00737at 776.412 kb on - strand, within MPMX26_00737at 776.450 kb on - strand, within MPMX26_00737at 776.450 kb on - strand, within MPMX26_00737at 776.450 kb on - strand, within MPMX26_00737at 776.467 kb on - strand, within MPMX26_00737at 776.513 kb on - strand, within MPMX26_00737at 776.559 kb on - strand, within MPMX26_00737at 776.571 kb on - strand, within MPMX26_00737at 776.609 kb on - strand, within MPMX26_00737at 776.609 kb on - strand, within MPMX26_00737at 776.609 kb on - strand, within MPMX26_00737at 776.609 kb on - strand, within MPMX26_00737at 776.609 kb on - strand, within MPMX26_00737at 776.609 kb on - strand, within MPMX26_00737at 776.672 kb on - strand, within MPMX26_00737at 776.672 kb on - strand, within MPMX26_00737at 776.672 kb on - strand, within MPMX26_00737at 776.672 kb on - strand, within MPMX26_00737at 776.672 kb on - strand, within MPMX26_00737at 776.672 kb on - strand, within MPMX26_00737at 776.672 kb on - strand, within MPMX26_00737at 776.672 kb on - strand, within MPMX26_00737at 777.348 kb on + strandat 777.348 kb on + strandat 777.527 kb on + strand, within MPMX26_00739at 777.541 kb on + strand, within MPMX26_00739at 777.541 kb on + strand, within MPMX26_00739at 777.541 kb on + strand, within MPMX26_00739at 777.541 kb on + strand, within MPMX26_00739at 777.541 kb on + strand, within MPMX26_00739at 777.598 kb on + strandat 778.015 kb on + strandat 778.020 kb on + strandat 778.044 kb on + strandat 778.061 kb on + strandat 778.061 kb on + strandat 778.061 kb on + strandat 778.061 kb on + strandat 778.061 kb on + strandat 778.061 kb on + strandat 778.071 kb on + strandat 778.071 kb on + strandat 778.084 kb on + strand, within MPMX26_00740at 778.084 kb on + strand, within MPMX26_00740at 778.084 kb on + strand, within MPMX26_00740at 778.084 kb on + strand, within MPMX26_00740at 778.084 kb on + strand, within MPMX26_00740at 778.084 kb on + strand, within MPMX26_00740at 778.084 kb on + strand, within MPMX26_00740at 778.091 kb on + strand, within MPMX26_00740at 778.091 kb on + strand, within MPMX26_00740at 778.099 kb on + strand, within MPMX26_00740at 778.119 kb on + strand, within MPMX26_00740

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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776,359 - MPMX26_00737 0.23 -0.4
776,383 - MPMX26_00737 0.28 -0.7
776,383 - MPMX26_00737 0.28 -0.1
776,383 - MPMX26_00737 0.28 -0.6
776,383 - MPMX26_00737 0.28 +0.0
776,383 - MPMX26_00737 0.28 -1.4
776,383 - MPMX26_00737 0.28 -1.3
776,383 - MPMX26_00737 0.28 +0.4
776,383 - MPMX26_00737 0.28 -0.9
776,398 - MPMX26_00737 0.31 -0.7
776,398 - MPMX26_00737 0.31 -0.6
776,398 - MPMX26_00737 0.31 +0.8
776,398 - MPMX26_00737 0.31 -2.4
776,398 - MPMX26_00737 0.31 +0.2
776,398 - MPMX26_00737 0.31 -0.7
776,398 - MPMX26_00737 0.31 -1.3
776,398 - MPMX26_00737 0.31 -1.5
776,398 - MPMX26_00737 0.31 +0.8
776,398 - MPMX26_00737 0.31 -1.4
776,398 - MPMX26_00737 0.31 +0.7
776,398 - MPMX26_00737 0.31 -0.4
776,398 - MPMX26_00737 0.31 -1.2
776,398 - MPMX26_00737 0.31 -1.2
776,398 - MPMX26_00737 0.31 -0.9
776,398 - MPMX26_00737 0.31 +0.9
776,398 - MPMX26_00737 0.31 -1.0
776,398 - MPMX26_00737 0.31 -0.8
776,398 - MPMX26_00737 0.31 -0.9
776,398 - MPMX26_00737 0.31 -0.1
776,398 - MPMX26_00737 0.31 -1.9
776,412 - MPMX26_00737 0.34 +0.5
776,450 - MPMX26_00737 0.42 -0.7
776,450 - MPMX26_00737 0.42 -1.1
776,450 - MPMX26_00737 0.42 -0.5
776,467 - MPMX26_00737 0.46 -0.5
776,513 - MPMX26_00737 0.55 -0.7
776,559 - MPMX26_00737 0.65 -0.4
776,571 - MPMX26_00737 0.67 -1.9
776,609 - MPMX26_00737 0.75 -1.0
776,609 - MPMX26_00737 0.75 -0.9
776,609 - MPMX26_00737 0.75 +0.1
776,609 - MPMX26_00737 0.75 -1.2
776,609 - MPMX26_00737 0.75 -1.7
776,609 - MPMX26_00737 0.75 +0.9
776,672 - MPMX26_00737 0.88 -1.3
776,672 - MPMX26_00737 0.88 -0.4
776,672 - MPMX26_00737 0.88 -0.4
776,672 - MPMX26_00737 0.88 -2.4
776,672 - MPMX26_00737 0.88 -0.7
776,672 - MPMX26_00737 0.88 -0.8
776,672 - MPMX26_00737 0.88 -0.9
776,672 - MPMX26_00737 0.88 -0.6
777,348 + -1.1
777,348 + -0.6
777,527 + MPMX26_00739 0.64 +0.0
777,541 + MPMX26_00739 0.69 -0.9
777,541 + MPMX26_00739 0.69 -1.5
777,541 + MPMX26_00739 0.69 -0.3
777,541 + MPMX26_00739 0.69 -1.4
777,541 + MPMX26_00739 0.69 -1.1
777,598 + +0.6
778,015 + -1.0
778,020 + -0.1
778,044 + +0.1
778,061 + +0.1
778,061 + +0.2
778,061 + +0.9
778,061 + -0.0
778,061 + +0.4
778,061 + +0.2
778,071 + +0.3
778,071 + +0.5
778,084 + MPMX26_00740 0.22 -0.0
778,084 + MPMX26_00740 0.22 -0.5
778,084 + MPMX26_00740 0.22 -0.6
778,084 + MPMX26_00740 0.22 +0.3
778,084 + MPMX26_00740 0.22 +0.1
778,084 + MPMX26_00740 0.22 +0.3
778,084 + MPMX26_00740 0.22 +0.4
778,091 + MPMX26_00740 0.31 +0.4
778,091 + MPMX26_00740 0.31 +0.4
778,099 + MPMX26_00740 0.42 +0.3
778,119 + MPMX26_00740 0.68 +0.3

Or see this region's nucleotide sequence