Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00734

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00733 and MPMX26_00734 are separated by 189 nucleotidesMPMX26_00734 and MPMX26_00735 are separated by 70 nucleotides MPMX26_00733: MPMX26_00733 - DNA primase, at 771,148 to 773,031 _00733 MPMX26_00734: MPMX26_00734 - Outer membrane protein assembly factor BamD, at 773,221 to 774,252 _00734 MPMX26_00735: MPMX26_00735 - Ribosomal large subunit pseudouridine synthase D, at 774,323 to 775,375 _00735 Position (kb) 773 774 775Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 773.083 kb on - strandat 773.103 kb on - strandat 773.108 kb on - strandat 773.141 kb on - strandat 773.250 kb on - strandat 773.276 kb on - strandat 773.280 kb on - strandat 773.284 kb on - strandat 773.284 kb on - strandat 773.286 kb on - strandat 773.286 kb on - strandat 773.318 kb on - strandat 773.325 kb on - strand, within MPMX26_00734at 773.325 kb on - strand, within MPMX26_00734at 773.325 kb on - strand, within MPMX26_00734at 773.346 kb on - strand, within MPMX26_00734at 773.363 kb on - strand, within MPMX26_00734at 773.383 kb on - strand, within MPMX26_00734at 773.400 kb on - strand, within MPMX26_00734at 773.439 kb on - strand, within MPMX26_00734at 773.464 kb on + strand, within MPMX26_00734at 773.474 kb on - strand, within MPMX26_00734at 773.474 kb on - strand, within MPMX26_00734at 773.474 kb on - strand, within MPMX26_00734at 773.474 kb on - strand, within MPMX26_00734at 773.474 kb on - strand, within MPMX26_00734at 773.474 kb on - strand, within MPMX26_00734at 773.474 kb on - strand, within MPMX26_00734at 773.474 kb on - strand, within MPMX26_00734at 773.474 kb on - strand, within MPMX26_00734at 773.474 kb on - strand, within MPMX26_00734at 773.474 kb on - strand, within MPMX26_00734at 773.474 kb on - strand, within MPMX26_00734at 773.474 kb on - strand, within MPMX26_00734at 773.474 kb on - strand, within MPMX26_00734at 773.474 kb on - strand, within MPMX26_00734at 773.474 kb on - strand, within MPMX26_00734at 773.474 kb on - strand, within MPMX26_00734at 773.474 kb on - strand, within MPMX26_00734at 773.474 kb on - strand, within MPMX26_00734at 773.474 kb on - strand, within MPMX26_00734at 773.474 kb on - strand, within MPMX26_00734at 773.474 kb on - strand, within MPMX26_00734at 773.484 kb on - strand, within MPMX26_00734at 773.501 kb on - strand, within MPMX26_00734at 773.501 kb on - strand, within MPMX26_00734at 773.501 kb on - strand, within MPMX26_00734at 773.501 kb on - strand, within MPMX26_00734at 773.501 kb on - strand, within MPMX26_00734at 773.501 kb on - strand, within MPMX26_00734at 773.501 kb on - strand, within MPMX26_00734at 773.501 kb on - strand, within MPMX26_00734at 773.501 kb on - strand, within MPMX26_00734at 773.506 kb on - strand, within MPMX26_00734at 773.525 kb on - strand, within MPMX26_00734at 773.525 kb on - strand, within MPMX26_00734at 773.525 kb on - strand, within MPMX26_00734at 773.525 kb on - strand, within MPMX26_00734at 773.525 kb on - strand, within MPMX26_00734at 773.525 kb on - strand, within MPMX26_00734at 773.525 kb on - strand, within MPMX26_00734at 773.525 kb on - strand, within MPMX26_00734at 773.525 kb on - strand, within MPMX26_00734at 773.527 kb on - strand, within MPMX26_00734at 773.528 kb on - strand, within MPMX26_00734at 773.530 kb on - strand, within MPMX26_00734at 773.542 kb on - strand, within MPMX26_00734at 773.542 kb on - strand, within MPMX26_00734at 773.542 kb on - strand, within MPMX26_00734at 773.542 kb on - strand, within MPMX26_00734at 774.312 kb on - strandat 774.363 kb on - strandat 774.403 kb on + strandat 774.408 kb on + strandat 774.416 kb on - strandat 774.416 kb on - strandat 774.416 kb on - strandat 774.416 kb on - strandat 774.416 kb on - strandat 774.416 kb on - strandat 774.451 kb on + strand, within MPMX26_00735at 774.462 kb on + strand, within MPMX26_00735at 774.462 kb on + strand, within MPMX26_00735at 774.470 kb on - strand, within MPMX26_00735at 774.470 kb on - strand, within MPMX26_00735at 774.470 kb on - strand, within MPMX26_00735at 774.474 kb on + strand, within MPMX26_00735at 774.474 kb on + strand, within MPMX26_00735at 774.494 kb on - strand, within MPMX26_00735at 774.494 kb on - strand, within MPMX26_00735at 774.496 kb on + strand, within MPMX26_00735at 774.496 kb on + strand, within MPMX26_00735at 774.496 kb on + strand, within MPMX26_00735at 774.496 kb on + strand, within MPMX26_00735at 774.504 kb on - strand, within MPMX26_00735at 774.504 kb on - strand, within MPMX26_00735at 774.506 kb on + strand, within MPMX26_00735at 774.534 kb on + strand, within MPMX26_00735at 774.534 kb on + strand, within MPMX26_00735at 774.543 kb on - strand, within MPMX26_00735at 774.588 kb on + strand, within MPMX26_00735at 774.593 kb on - strand, within MPMX26_00735at 774.607 kb on + strand, within MPMX26_00735at 774.607 kb on + strand, within MPMX26_00735at 774.607 kb on + strand, within MPMX26_00735at 774.607 kb on + strand, within MPMX26_00735at 774.607 kb on + strand, within MPMX26_00735at 774.662 kb on + strand, within MPMX26_00735at 774.722 kb on + strand, within MPMX26_00735at 774.727 kb on + strand, within MPMX26_00735at 774.740 kb on + strand, within MPMX26_00735at 774.755 kb on + strand, within MPMX26_00735at 774.755 kb on + strand, within MPMX26_00735at 774.760 kb on + strand, within MPMX26_00735at 774.760 kb on + strand, within MPMX26_00735at 774.760 kb on + strand, within MPMX26_00735at 774.760 kb on + strand, within MPMX26_00735at 774.768 kb on - strand, within MPMX26_00735at 774.772 kb on + strand, within MPMX26_00735at 774.772 kb on + strand, within MPMX26_00735at 774.772 kb on + strand, within MPMX26_00735at 774.772 kb on + strand, within MPMX26_00735at 774.772 kb on + strand, within MPMX26_00735at 774.772 kb on + strand, within MPMX26_00735at 774.772 kb on + strand, within MPMX26_00735at 774.780 kb on - strand, within MPMX26_00735at 774.792 kb on + strand, within MPMX26_00735at 774.797 kb on + strand, within MPMX26_00735at 774.805 kb on - strand, within MPMX26_00735at 774.807 kb on + strand, within MPMX26_00735at 774.807 kb on + strand, within MPMX26_00735at 774.807 kb on + strand, within MPMX26_00735at 774.807 kb on + strand, within MPMX26_00735at 774.815 kb on - strand, within MPMX26_00735at 774.836 kb on + strand, within MPMX26_00735at 774.958 kb on - strand, within MPMX26_00735at 774.980 kb on + strand, within MPMX26_00735at 775.029 kb on + strand, within MPMX26_00735at 775.038 kb on + strand, within MPMX26_00735at 775.075 kb on + strand, within MPMX26_00735at 775.096 kb on + strand, within MPMX26_00735at 775.096 kb on + strand, within MPMX26_00735at 775.096 kb on + strand, within MPMX26_00735at 775.096 kb on + strand, within MPMX26_00735at 775.096 kb on + strand, within MPMX26_00735at 775.096 kb on + strand, within MPMX26_00735at 775.096 kb on + strand, within MPMX26_00735at 775.096 kb on + strand, within MPMX26_00735at 775.096 kb on + strand, within MPMX26_00735at 775.104 kb on - strand, within MPMX26_00735at 775.104 kb on - strand, within MPMX26_00735at 775.115 kb on + strand, within MPMX26_00735at 775.115 kb on + strand, within MPMX26_00735at 775.115 kb on + strand, within MPMX26_00735at 775.115 kb on + strand, within MPMX26_00735at 775.118 kb on - strand, within MPMX26_00735at 775.146 kb on + strand, within MPMX26_00735at 775.151 kb on + strand, within MPMX26_00735at 775.168 kb on + strand, within MPMX26_00735at 775.168 kb on + strand, within MPMX26_00735at 775.177 kb on - strand, within MPMX26_00735at 775.182 kb on + strand, within MPMX26_00735at 775.186 kb on + strand, within MPMX26_00735at 775.187 kb on + strand, within MPMX26_00735at 775.187 kb on - strand, within MPMX26_00735at 775.195 kb on - strand, within MPMX26_00735at 775.211 kb on - strand, within MPMX26_00735at 775.216 kb on + strand, within MPMX26_00735at 775.224 kb on - strand, within MPMX26_00735at 775.233 kb on + strand, within MPMX26_00735at 775.233 kb on + strand, within MPMX26_00735at 775.233 kb on + strand, within MPMX26_00735at 775.233 kb on + strand, within MPMX26_00735at 775.233 kb on + strand, within MPMX26_00735at 775.233 kb on + strand, within MPMX26_00735at 775.241 kb on - strand, within MPMX26_00735at 775.246 kb on + strand, within MPMX26_00735at 775.247 kb on + strand, within MPMX26_00735at 775.247 kb on + strand, within MPMX26_00735

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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773,083 - -0.9
773,103 - +0.6
773,108 - +2.6
773,141 - -1.0
773,250 - +0.3
773,276 - +0.1
773,280 - -0.1
773,284 - -0.0
773,284 - -0.0
773,286 - -0.6
773,286 - -0.7
773,318 - +0.2
773,325 - MPMX26_00734 0.10 -0.2
773,325 - MPMX26_00734 0.10 -0.3
773,325 - MPMX26_00734 0.10 +0.2
773,346 - MPMX26_00734 0.12 -0.2
773,363 - MPMX26_00734 0.14 +0.9
773,383 - MPMX26_00734 0.16 +1.0
773,400 - MPMX26_00734 0.17 -0.6
773,439 - MPMX26_00734 0.21 -0.5
773,464 + MPMX26_00734 0.24 +0.2
773,474 - MPMX26_00734 0.25 -0.4
773,474 - MPMX26_00734 0.25 -0.5
773,474 - MPMX26_00734 0.25 +2.2
773,474 - MPMX26_00734 0.25 +0.1
773,474 - MPMX26_00734 0.25 +0.4
773,474 - MPMX26_00734 0.25 +0.3
773,474 - MPMX26_00734 0.25 +0.0
773,474 - MPMX26_00734 0.25 -0.1
773,474 - MPMX26_00734 0.25 -0.3
773,474 - MPMX26_00734 0.25 -0.3
773,474 - MPMX26_00734 0.25 +0.4
773,474 - MPMX26_00734 0.25 -0.3
773,474 - MPMX26_00734 0.25 +0.5
773,474 - MPMX26_00734 0.25 +0.3
773,474 - MPMX26_00734 0.25 +0.7
773,474 - MPMX26_00734 0.25 -0.3
773,474 - MPMX26_00734 0.25 -0.1
773,474 - MPMX26_00734 0.25 -1.4
773,474 - MPMX26_00734 0.25 +0.1
773,474 - MPMX26_00734 0.25 +0.3
773,474 - MPMX26_00734 0.25 -0.0
773,474 - MPMX26_00734 0.25 -0.1
773,484 - MPMX26_00734 0.25 -0.0
773,501 - MPMX26_00734 0.27 +0.0
773,501 - MPMX26_00734 0.27 +0.6
773,501 - MPMX26_00734 0.27 +0.4
773,501 - MPMX26_00734 0.27 -0.0
773,501 - MPMX26_00734 0.27 -0.1
773,501 - MPMX26_00734 0.27 -0.1
773,501 - MPMX26_00734 0.27 -0.5
773,501 - MPMX26_00734 0.27 -0.1
773,501 - MPMX26_00734 0.27 +0.5
773,506 - MPMX26_00734 0.28 -0.0
773,525 - MPMX26_00734 0.29 -0.0
773,525 - MPMX26_00734 0.29 -0.4
773,525 - MPMX26_00734 0.29 +0.1
773,525 - MPMX26_00734 0.29 -0.4
773,525 - MPMX26_00734 0.29 -0.1
773,525 - MPMX26_00734 0.29 +0.1
773,525 - MPMX26_00734 0.29 +0.3
773,525 - MPMX26_00734 0.29 +0.4
773,525 - MPMX26_00734 0.29 +0.3
773,527 - MPMX26_00734 0.30 +0.6
773,528 - MPMX26_00734 0.30 -0.4
773,530 - MPMX26_00734 0.30 +0.0
773,542 - MPMX26_00734 0.31 -0.3
773,542 - MPMX26_00734 0.31 +0.5
773,542 - MPMX26_00734 0.31 +0.1
773,542 - MPMX26_00734 0.31 +0.3
774,312 - -0.4
774,363 - +0.3
774,403 + -2.8
774,408 + -0.4
774,416 - -1.9
774,416 - -0.4
774,416 - -1.2
774,416 - -0.9
774,416 - -1.5
774,416 - +0.3
774,451 + MPMX26_00735 0.12 -2.4
774,462 + MPMX26_00735 0.13 -0.4
774,462 + MPMX26_00735 0.13 -0.4
774,470 - MPMX26_00735 0.14 -1.4
774,470 - MPMX26_00735 0.14 +0.1
774,470 - MPMX26_00735 0.14 -0.2
774,474 + MPMX26_00735 0.14 +0.1
774,474 + MPMX26_00735 0.14 -1.4
774,494 - MPMX26_00735 0.16 +1.6
774,494 - MPMX26_00735 0.16 -1.1
774,496 + MPMX26_00735 0.16 -0.9
774,496 + MPMX26_00735 0.16 -1.1
774,496 + MPMX26_00735 0.16 -0.5
774,496 + MPMX26_00735 0.16 -0.8
774,504 - MPMX26_00735 0.17 +0.4
774,504 - MPMX26_00735 0.17 -1.2
774,506 + MPMX26_00735 0.17 -0.3
774,534 + MPMX26_00735 0.20 -0.4
774,534 + MPMX26_00735 0.20 -0.1
774,543 - MPMX26_00735 0.21 -0.9
774,588 + MPMX26_00735 0.25 -0.6
774,593 - MPMX26_00735 0.26 -2.9
774,607 + MPMX26_00735 0.27 -0.5
774,607 + MPMX26_00735 0.27 -1.0
774,607 + MPMX26_00735 0.27 -0.9
774,607 + MPMX26_00735 0.27 -1.2
774,607 + MPMX26_00735 0.27 -0.1
774,662 + MPMX26_00735 0.32 -1.4
774,722 + MPMX26_00735 0.38 -1.2
774,727 + MPMX26_00735 0.38 -2.2
774,740 + MPMX26_00735 0.40 -0.6
774,755 + MPMX26_00735 0.41 -0.8
774,755 + MPMX26_00735 0.41 -2.1
774,760 + MPMX26_00735 0.42 -0.8
774,760 + MPMX26_00735 0.42 -1.6
774,760 + MPMX26_00735 0.42 -1.7
774,760 + MPMX26_00735 0.42 +0.3
774,768 - MPMX26_00735 0.42 +2.6
774,772 + MPMX26_00735 0.43 -1.1
774,772 + MPMX26_00735 0.43 -1.7
774,772 + MPMX26_00735 0.43 +0.2
774,772 + MPMX26_00735 0.43 -0.5
774,772 + MPMX26_00735 0.43 -1.2
774,772 + MPMX26_00735 0.43 -0.9
774,772 + MPMX26_00735 0.43 +0.4
774,780 - MPMX26_00735 0.43 -0.7
774,792 + MPMX26_00735 0.45 -0.5
774,797 + MPMX26_00735 0.45 -0.4
774,805 - MPMX26_00735 0.46 +1.1
774,807 + MPMX26_00735 0.46 -0.6
774,807 + MPMX26_00735 0.46 -1.5
774,807 + MPMX26_00735 0.46 -0.7
774,807 + MPMX26_00735 0.46 +0.1
774,815 - MPMX26_00735 0.47 -0.9
774,836 + MPMX26_00735 0.49 -1.7
774,958 - MPMX26_00735 0.60 -0.4
774,980 + MPMX26_00735 0.62 -0.7
775,029 + MPMX26_00735 0.67 -1.2
775,038 + MPMX26_00735 0.68 -1.0
775,075 + MPMX26_00735 0.71 -1.4
775,096 + MPMX26_00735 0.73 -0.0
775,096 + MPMX26_00735 0.73 -1.8
775,096 + MPMX26_00735 0.73 -1.4
775,096 + MPMX26_00735 0.73 -0.7
775,096 + MPMX26_00735 0.73 -1.4
775,096 + MPMX26_00735 0.73 -1.2
775,096 + MPMX26_00735 0.73 -1.2
775,096 + MPMX26_00735 0.73 -0.7
775,096 + MPMX26_00735 0.73 -0.0
775,104 - MPMX26_00735 0.74 -0.2
775,104 - MPMX26_00735 0.74 +0.2
775,115 + MPMX26_00735 0.75 -1.2
775,115 + MPMX26_00735 0.75 -0.7
775,115 + MPMX26_00735 0.75 -0.6
775,115 + MPMX26_00735 0.75 -1.7
775,118 - MPMX26_00735 0.75 -1.2
775,146 + MPMX26_00735 0.78 -0.7
775,151 + MPMX26_00735 0.79 -0.9
775,168 + MPMX26_00735 0.80 -0.2
775,168 + MPMX26_00735 0.80 -0.5
775,177 - MPMX26_00735 0.81 -0.4
775,182 + MPMX26_00735 0.82 -1.2
775,186 + MPMX26_00735 0.82 -1.3
775,187 + MPMX26_00735 0.82 -0.7
775,187 - MPMX26_00735 0.82 -1.5
775,195 - MPMX26_00735 0.83 -0.7
775,211 - MPMX26_00735 0.84 -0.1
775,216 + MPMX26_00735 0.85 -1.0
775,224 - MPMX26_00735 0.86 -2.3
775,233 + MPMX26_00735 0.86 -2.1
775,233 + MPMX26_00735 0.86 -1.4
775,233 + MPMX26_00735 0.86 -2.4
775,233 + MPMX26_00735 0.86 -0.9
775,233 + MPMX26_00735 0.86 -0.6
775,233 + MPMX26_00735 0.86 -0.3
775,241 - MPMX26_00735 0.87 +2.2
775,246 + MPMX26_00735 0.88 -1.1
775,247 + MPMX26_00735 0.88 -0.7
775,247 + MPMX26_00735 0.88 -2.7

Or see this region's nucleotide sequence