Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00646

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00644 and MPMX26_00645 overlap by 46 nucleotidesMPMX26_00645 and MPMX26_00646 are separated by 38 nucleotidesMPMX26_00646 and MPMX26_00647 are separated by 134 nucleotidesMPMX26_00647 and MPMX26_00648 are separated by 36 nucleotides MPMX26_00644: MPMX26_00644 - hypothetical protein, at 688,074 to 688,565 _00644 MPMX26_00645: MPMX26_00645 - dTTP/UTP pyrophosphatase, at 688,520 to 689,119 _00645 MPMX26_00646: MPMX26_00646 - Ribonuclease G, at 689,158 to 690,612 _00646 MPMX26_00647: MPMX26_00647 - hypothetical protein, at 690,747 to 690,920 _00647 MPMX26_00648: MPMX26_00648 - O-acyltransferase WSD, at 690,957 to 692,342 _00648 Position (kb) 689 690 691Strain fitness (log2 ratio) -3 -2 -1 0 1at 688.223 kb on + strand, within MPMX26_00644at 688.223 kb on + strand, within MPMX26_00644at 688.223 kb on + strand, within MPMX26_00644at 688.223 kb on + strand, within MPMX26_00644at 688.223 kb on + strand, within MPMX26_00644at 688.223 kb on + strand, within MPMX26_00644at 688.223 kb on + strand, within MPMX26_00644at 688.223 kb on + strand, within MPMX26_00644at 688.223 kb on + strand, within MPMX26_00644at 688.223 kb on + strand, within MPMX26_00644at 688.223 kb on + strand, within MPMX26_00644at 688.223 kb on + strand, within MPMX26_00644at 688.223 kb on + strand, within MPMX26_00644at 688.223 kb on + strand, within MPMX26_00644at 688.223 kb on + strand, within MPMX26_00644at 688.223 kb on + strand, within MPMX26_00644at 688.223 kb on + strand, within MPMX26_00644at 688.223 kb on + strand, within MPMX26_00644at 688.223 kb on + strand, within MPMX26_00644at 688.223 kb on + strand, within MPMX26_00644at 688.223 kb on + strand, within MPMX26_00644at 688.223 kb on + strand, within MPMX26_00644at 688.239 kb on + strand, within MPMX26_00644at 688.249 kb on + strand, within MPMX26_00644at 688.249 kb on + strand, within MPMX26_00644at 688.254 kb on + strand, within MPMX26_00644at 688.254 kb on + strand, within MPMX26_00644at 688.290 kb on + strand, within MPMX26_00644at 688.292 kb on + strand, within MPMX26_00644at 688.292 kb on + strand, within MPMX26_00644at 688.330 kb on + strand, within MPMX26_00644at 688.348 kb on + strand, within MPMX26_00644at 688.360 kb on + strand, within MPMX26_00644at 688.366 kb on + strand, within MPMX26_00644at 688.457 kb on + strand, within MPMX26_00644at 688.457 kb on + strand, within MPMX26_00644at 688.457 kb on + strand, within MPMX26_00644at 688.457 kb on + strand, within MPMX26_00644at 688.457 kb on + strand, within MPMX26_00644at 688.520 kb on + strandat 688.520 kb on + strandat 688.525 kb on + strandat 688.525 kb on + strandat 688.587 kb on + strand, within MPMX26_00645at 688.590 kb on + strand, within MPMX26_00645at 688.635 kb on + strand, within MPMX26_00645at 688.635 kb on + strand, within MPMX26_00645at 688.651 kb on + strand, within MPMX26_00645at 688.653 kb on + strand, within MPMX26_00645at 688.680 kb on + strand, within MPMX26_00645at 688.683 kb on + strand, within MPMX26_00645at 688.754 kb on + strand, within MPMX26_00645at 688.754 kb on + strand, within MPMX26_00645at 688.754 kb on + strand, within MPMX26_00645at 688.764 kb on + strand, within MPMX26_00645at 688.774 kb on + strand, within MPMX26_00645at 688.774 kb on + strand, within MPMX26_00645at 688.774 kb on + strand, within MPMX26_00645at 688.867 kb on + strand, within MPMX26_00645at 688.872 kb on + strand, within MPMX26_00645at 688.904 kb on + strand, within MPMX26_00645at 688.904 kb on + strand, within MPMX26_00645at 688.908 kb on + strand, within MPMX26_00645at 688.938 kb on + strand, within MPMX26_00645at 688.998 kb on + strand, within MPMX26_00645at 689.003 kb on + strand, within MPMX26_00645at 689.008 kb on + strand, within MPMX26_00645at 689.008 kb on + strand, within MPMX26_00645at 689.008 kb on + strand, within MPMX26_00645at 689.008 kb on + strand, within MPMX26_00645at 689.057 kb on + strand, within MPMX26_00645at 689.074 kb on + strandat 689.188 kb on + strandat 689.196 kb on + strandat 689.254 kb on + strandat 689.254 kb on + strandat 689.254 kb on + strandat 689.286 kb on + strandat 689.443 kb on + strand, within MPMX26_00646at 689.484 kb on + strand, within MPMX26_00646at 689.484 kb on + strand, within MPMX26_00646at 689.489 kb on + strand, within MPMX26_00646at 689.503 kb on + strand, within MPMX26_00646at 689.647 kb on + strand, within MPMX26_00646at 689.691 kb on + strand, within MPMX26_00646at 689.692 kb on + strand, within MPMX26_00646at 689.803 kb on + strand, within MPMX26_00646at 689.883 kb on + strand, within MPMX26_00646at 689.918 kb on + strand, within MPMX26_00646at 689.918 kb on + strand, within MPMX26_00646at 689.923 kb on + strand, within MPMX26_00646at 689.923 kb on + strand, within MPMX26_00646at 689.935 kb on + strand, within MPMX26_00646at 689.946 kb on + strand, within MPMX26_00646at 689.946 kb on + strand, within MPMX26_00646at 689.946 kb on + strand, within MPMX26_00646at 689.974 kb on + strand, within MPMX26_00646at 689.974 kb on + strand, within MPMX26_00646at 690.027 kb on + strand, within MPMX26_00646at 690.027 kb on + strand, within MPMX26_00646at 690.034 kb on + strand, within MPMX26_00646at 690.054 kb on + strand, within MPMX26_00646at 690.062 kb on + strand, within MPMX26_00646at 690.062 kb on + strand, within MPMX26_00646at 690.062 kb on + strand, within MPMX26_00646at 690.062 kb on + strand, within MPMX26_00646at 690.062 kb on + strand, within MPMX26_00646at 690.062 kb on + strand, within MPMX26_00646at 690.085 kb on + strand, within MPMX26_00646at 690.337 kb on + strand, within MPMX26_00646at 690.378 kb on + strand, within MPMX26_00646at 690.476 kb on + strandat 690.484 kb on + strandat 690.484 kb on + strandat 690.484 kb on + strandat 690.484 kb on + strandat 690.484 kb on + strandat 690.484 kb on + strandat 690.484 kb on + strandat 690.495 kb on + strandat 690.498 kb on + strandat 690.576 kb on + strandat 690.576 kb on + strandat 690.688 kb on + strandat 690.698 kb on + strandat 690.718 kb on + strandat 690.718 kb on + strandat 690.851 kb on + strand, within MPMX26_00647at 690.856 kb on + strand, within MPMX26_00647at 690.876 kb on + strand, within MPMX26_00647at 690.899 kb on + strand, within MPMX26_00647at 690.899 kb on + strand, within MPMX26_00647at 690.962 kb on - strandat 691.002 kb on - strandat 691.067 kb on - strandat 691.067 kb on - strandat 691.133 kb on - strand, within MPMX26_00648at 691.241 kb on - strand, within MPMX26_00648at 691.241 kb on - strand, within MPMX26_00648at 691.296 kb on - strand, within MPMX26_00648at 691.296 kb on - strand, within MPMX26_00648at 691.296 kb on - strand, within MPMX26_00648at 691.298 kb on - strand, within MPMX26_00648at 691.298 kb on - strand, within MPMX26_00648at 691.298 kb on - strand, within MPMX26_00648at 691.383 kb on - strand, within MPMX26_00648at 691.407 kb on - strand, within MPMX26_00648at 691.413 kb on - strand, within MPMX26_00648at 691.413 kb on - strand, within MPMX26_00648at 691.413 kb on - strand, within MPMX26_00648at 691.451 kb on - strand, within MPMX26_00648at 691.451 kb on - strand, within MPMX26_00648at 691.482 kb on - strand, within MPMX26_00648at 691.515 kb on - strand, within MPMX26_00648at 691.520 kb on - strand, within MPMX26_00648at 691.520 kb on - strand, within MPMX26_00648at 691.551 kb on - strand, within MPMX26_00648at 691.551 kb on - strand, within MPMX26_00648at 691.551 kb on - strand, within MPMX26_00648at 691.551 kb on - strand, within MPMX26_00648

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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688,223 + MPMX26_00644 0.30 -0.2
688,223 + MPMX26_00644 0.30 -0.0
688,223 + MPMX26_00644 0.30 -1.5
688,223 + MPMX26_00644 0.30 -0.9
688,223 + MPMX26_00644 0.30 +0.8
688,223 + MPMX26_00644 0.30 +0.2
688,223 + MPMX26_00644 0.30 -1.1
688,223 + MPMX26_00644 0.30 -0.1
688,223 + MPMX26_00644 0.30 +0.4
688,223 + MPMX26_00644 0.30 -1.7
688,223 + MPMX26_00644 0.30 +1.2
688,223 + MPMX26_00644 0.30 -0.4
688,223 + MPMX26_00644 0.30 -0.3
688,223 + MPMX26_00644 0.30 -0.4
688,223 + MPMX26_00644 0.30 -2.4
688,223 + MPMX26_00644 0.30 -0.2
688,223 + MPMX26_00644 0.30 -1.2
688,223 + MPMX26_00644 0.30 +0.3
688,223 + MPMX26_00644 0.30 +0.1
688,223 + MPMX26_00644 0.30 -0.0
688,223 + MPMX26_00644 0.30 -1.4
688,223 + MPMX26_00644 0.30 +0.6
688,239 + MPMX26_00644 0.34 -0.7
688,249 + MPMX26_00644 0.36 -1.3
688,249 + MPMX26_00644 0.36 -0.5
688,254 + MPMX26_00644 0.37 -1.7
688,254 + MPMX26_00644 0.37 -0.9
688,290 + MPMX26_00644 0.44 +0.0
688,292 + MPMX26_00644 0.44 -0.9
688,292 + MPMX26_00644 0.44 -0.5
688,330 + MPMX26_00644 0.52 -1.1
688,348 + MPMX26_00644 0.56 +0.7
688,360 + MPMX26_00644 0.58 -0.3
688,366 + MPMX26_00644 0.59 -1.2
688,457 + MPMX26_00644 0.78 -0.4
688,457 + MPMX26_00644 0.78 +0.3
688,457 + MPMX26_00644 0.78 +0.1
688,457 + MPMX26_00644 0.78 +0.4
688,457 + MPMX26_00644 0.78 -1.9
688,520 + -0.2
688,520 + -0.2
688,525 + +0.6
688,525 + +0.1
688,587 + MPMX26_00645 0.11 -0.3
688,590 + MPMX26_00645 0.12 +0.1
688,635 + MPMX26_00645 0.19 -0.4
688,635 + MPMX26_00645 0.19 +0.6
688,651 + MPMX26_00645 0.22 -0.1
688,653 + MPMX26_00645 0.22 -0.8
688,680 + MPMX26_00645 0.27 +0.5
688,683 + MPMX26_00645 0.27 -0.7
688,754 + MPMX26_00645 0.39 -0.0
688,754 + MPMX26_00645 0.39 -0.3
688,754 + MPMX26_00645 0.39 -0.6
688,764 + MPMX26_00645 0.41 +0.4
688,774 + MPMX26_00645 0.42 +0.1
688,774 + MPMX26_00645 0.42 +0.0
688,774 + MPMX26_00645 0.42 +0.6
688,867 + MPMX26_00645 0.58 -0.3
688,872 + MPMX26_00645 0.59 -0.3
688,904 + MPMX26_00645 0.64 -0.5
688,904 + MPMX26_00645 0.64 +0.3
688,908 + MPMX26_00645 0.65 -0.2
688,938 + MPMX26_00645 0.70 -0.6
688,998 + MPMX26_00645 0.80 +0.6
689,003 + MPMX26_00645 0.81 +1.3
689,008 + MPMX26_00645 0.81 -0.3
689,008 + MPMX26_00645 0.81 +0.1
689,008 + MPMX26_00645 0.81 -0.1
689,008 + MPMX26_00645 0.81 -0.4
689,057 + MPMX26_00645 0.90 -0.2
689,074 + -0.9
689,188 + +1.2
689,196 + -0.8
689,254 + -0.2
689,254 + -0.6
689,254 + -0.9
689,286 + -0.5
689,443 + MPMX26_00646 0.20 -0.6
689,484 + MPMX26_00646 0.22 -1.4
689,484 + MPMX26_00646 0.22 -0.2
689,489 + MPMX26_00646 0.23 +0.6
689,503 + MPMX26_00646 0.24 -0.4
689,647 + MPMX26_00646 0.34 -1.0
689,691 + MPMX26_00646 0.37 -2.3
689,692 + MPMX26_00646 0.37 -0.3
689,803 + MPMX26_00646 0.44 -0.6
689,883 + MPMX26_00646 0.50 -1.2
689,918 + MPMX26_00646 0.52 -0.7
689,918 + MPMX26_00646 0.52 +1.6
689,923 + MPMX26_00646 0.53 +0.2
689,923 + MPMX26_00646 0.53 -0.5
689,935 + MPMX26_00646 0.53 -1.1
689,946 + MPMX26_00646 0.54 -1.2
689,946 + MPMX26_00646 0.54 -0.3
689,946 + MPMX26_00646 0.54 -0.7
689,974 + MPMX26_00646 0.56 -0.7
689,974 + MPMX26_00646 0.56 -1.0
690,027 + MPMX26_00646 0.60 -2.0
690,027 + MPMX26_00646 0.60 -3.0
690,034 + MPMX26_00646 0.60 +0.3
690,054 + MPMX26_00646 0.62 -1.2
690,062 + MPMX26_00646 0.62 -0.4
690,062 + MPMX26_00646 0.62 -1.2
690,062 + MPMX26_00646 0.62 -0.9
690,062 + MPMX26_00646 0.62 -0.8
690,062 + MPMX26_00646 0.62 +0.6
690,062 + MPMX26_00646 0.62 +0.9
690,085 + MPMX26_00646 0.64 -0.6
690,337 + MPMX26_00646 0.81 -2.3
690,378 + MPMX26_00646 0.84 -0.1
690,476 + -0.9
690,484 + -1.3
690,484 + +0.1
690,484 + -0.8
690,484 + -1.8
690,484 + +0.1
690,484 + -1.8
690,484 + -1.6
690,495 + -0.4
690,498 + -0.0
690,576 + -1.5
690,576 + -1.1
690,688 + -0.6
690,698 + +0.6
690,718 + +0.7
690,718 + -1.1
690,851 + MPMX26_00647 0.60 -1.0
690,856 + MPMX26_00647 0.63 -1.0
690,876 + MPMX26_00647 0.74 -2.9
690,899 + MPMX26_00647 0.87 -0.2
690,899 + MPMX26_00647 0.87 +0.7
690,962 - -0.2
691,002 - -0.2
691,067 - -0.1
691,067 - +0.3
691,133 - MPMX26_00648 0.13 -0.2
691,241 - MPMX26_00648 0.20 -0.1
691,241 - MPMX26_00648 0.20 -0.7
691,296 - MPMX26_00648 0.24 +0.2
691,296 - MPMX26_00648 0.24 -0.1
691,296 - MPMX26_00648 0.24 +0.5
691,298 - MPMX26_00648 0.25 -0.0
691,298 - MPMX26_00648 0.25 +0.1
691,298 - MPMX26_00648 0.25 +0.0
691,383 - MPMX26_00648 0.31 +0.1
691,407 - MPMX26_00648 0.32 +0.2
691,413 - MPMX26_00648 0.33 +0.1
691,413 - MPMX26_00648 0.33 -0.5
691,413 - MPMX26_00648 0.33 -0.3
691,451 - MPMX26_00648 0.36 +1.6
691,451 - MPMX26_00648 0.36 -0.4
691,482 - MPMX26_00648 0.38 +0.3
691,515 - MPMX26_00648 0.40 +0.2
691,520 - MPMX26_00648 0.41 +0.0
691,520 - MPMX26_00648 0.41 -0.8
691,551 - MPMX26_00648 0.43 -0.4
691,551 - MPMX26_00648 0.43 +0.4
691,551 - MPMX26_00648 0.43 -0.7
691,551 - MPMX26_00648 0.43 +0.5

Or see this region's nucleotide sequence