Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00618

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00616 and MPMX26_00617 are separated by 168 nucleotidesMPMX26_00617 and MPMX26_00618 are separated by 86 nucleotidesMPMX26_00618 and MPMX26_00619 are separated by 138 nucleotides MPMX26_00616: MPMX26_00616 - hypothetical protein, at 651,224 to 653,833 _00616 MPMX26_00617: MPMX26_00617 - hypothetical protein, at 654,002 to 654,562 _00617 MPMX26_00618: MPMX26_00618 - Inner membrane protein YccS, at 654,649 to 656,820 _00618 MPMX26_00619: MPMX26_00619 - Bicyclomycin resistance protein, at 656,959 to 658,167 _00619 Position (kb) 654 655 656 657Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 653.661 kb on + strandat 653.669 kb on - strandat 653.669 kb on - strandat 653.669 kb on - strandat 653.697 kb on - strandat 653.700 kb on - strandat 653.702 kb on + strandat 653.702 kb on - strandat 653.702 kb on - strandat 653.710 kb on - strandat 653.710 kb on - strandat 653.715 kb on - strandat 653.779 kb on + strandat 653.809 kb on - strandat 653.839 kb on - strandat 654.016 kb on - strandat 654.017 kb on - strandat 654.017 kb on - strandat 654.017 kb on - strandat 654.017 kb on - strandat 654.017 kb on - strandat 654.103 kb on - strand, within MPMX26_00617at 654.103 kb on - strand, within MPMX26_00617at 654.103 kb on - strand, within MPMX26_00617at 654.112 kb on - strand, within MPMX26_00617at 654.236 kb on - strand, within MPMX26_00617at 654.305 kb on - strand, within MPMX26_00617at 654.313 kb on - strand, within MPMX26_00617at 654.313 kb on - strand, within MPMX26_00617at 654.355 kb on - strand, within MPMX26_00617at 654.355 kb on - strand, within MPMX26_00617at 654.355 kb on - strand, within MPMX26_00617at 654.355 kb on - strand, within MPMX26_00617at 654.355 kb on - strand, within MPMX26_00617at 654.355 kb on - strand, within MPMX26_00617at 654.355 kb on - strand, within MPMX26_00617at 654.502 kb on - strand, within MPMX26_00617at 654.502 kb on - strand, within MPMX26_00617at 654.542 kb on - strandat 654.718 kb on - strandat 654.718 kb on - strandat 654.718 kb on - strandat 654.718 kb on - strandat 654.777 kb on - strandat 654.841 kb on - strandat 654.845 kb on - strandat 654.855 kb on - strandat 654.861 kb on - strandat 654.864 kb on - strandat 654.897 kb on - strand, within MPMX26_00618at 655.107 kb on - strand, within MPMX26_00618at 655.107 kb on - strand, within MPMX26_00618at 655.107 kb on - strand, within MPMX26_00618at 655.194 kb on - strand, within MPMX26_00618at 655.222 kb on - strand, within MPMX26_00618at 655.243 kb on - strand, within MPMX26_00618at 655.243 kb on - strand, within MPMX26_00618at 655.401 kb on - strand, within MPMX26_00618at 655.414 kb on - strand, within MPMX26_00618at 655.425 kb on - strand, within MPMX26_00618at 655.599 kb on - strand, within MPMX26_00618at 655.599 kb on - strand, within MPMX26_00618at 655.599 kb on - strand, within MPMX26_00618at 655.599 kb on - strand, within MPMX26_00618at 655.599 kb on - strand, within MPMX26_00618at 655.606 kb on - strand, within MPMX26_00618at 655.614 kb on - strand, within MPMX26_00618at 655.629 kb on - strand, within MPMX26_00618at 655.663 kb on - strand, within MPMX26_00618at 655.717 kb on - strand, within MPMX26_00618at 655.812 kb on - strand, within MPMX26_00618at 655.834 kb on - strand, within MPMX26_00618at 655.839 kb on - strand, within MPMX26_00618at 655.974 kb on - strand, within MPMX26_00618at 655.974 kb on - strand, within MPMX26_00618at 655.974 kb on - strand, within MPMX26_00618at 655.974 kb on - strand, within MPMX26_00618at 656.062 kb on - strand, within MPMX26_00618at 656.062 kb on - strand, within MPMX26_00618at 656.140 kb on - strand, within MPMX26_00618at 656.140 kb on - strand, within MPMX26_00618at 656.254 kb on - strand, within MPMX26_00618at 656.254 kb on - strand, within MPMX26_00618at 656.254 kb on - strand, within MPMX26_00618at 656.314 kb on - strand, within MPMX26_00618at 656.314 kb on - strand, within MPMX26_00618at 656.320 kb on - strand, within MPMX26_00618at 656.335 kb on - strand, within MPMX26_00618at 656.369 kb on - strand, within MPMX26_00618at 656.369 kb on - strand, within MPMX26_00618at 656.369 kb on - strand, within MPMX26_00618at 656.369 kb on - strand, within MPMX26_00618at 656.371 kb on - strand, within MPMX26_00618at 656.373 kb on - strand, within MPMX26_00618at 656.373 kb on - strand, within MPMX26_00618at 656.373 kb on - strand, within MPMX26_00618at 656.373 kb on - strand, within MPMX26_00618at 656.373 kb on - strand, within MPMX26_00618at 656.373 kb on - strand, within MPMX26_00618at 656.404 kb on - strand, within MPMX26_00618at 656.408 kb on - strand, within MPMX26_00618at 656.429 kb on - strand, within MPMX26_00618at 656.429 kb on - strand, within MPMX26_00618at 656.429 kb on - strand, within MPMX26_00618at 656.429 kb on - strand, within MPMX26_00618at 656.429 kb on - strand, within MPMX26_00618at 656.429 kb on - strand, within MPMX26_00618at 656.429 kb on - strand, within MPMX26_00618at 656.441 kb on - strand, within MPMX26_00618at 656.441 kb on - strand, within MPMX26_00618at 656.485 kb on - strand, within MPMX26_00618at 656.514 kb on - strand, within MPMX26_00618at 656.519 kb on - strand, within MPMX26_00618at 656.555 kb on - strand, within MPMX26_00618at 656.555 kb on - strand, within MPMX26_00618at 656.565 kb on - strand, within MPMX26_00618at 656.579 kb on - strand, within MPMX26_00618at 656.614 kb on - strandat 656.614 kb on - strandat 656.623 kb on - strandat 656.656 kb on - strandat 656.671 kb on - strandat 656.671 kb on - strandat 656.671 kb on - strandat 656.751 kb on - strandat 656.768 kb on - strandat 656.785 kb on - strandat 656.801 kb on - strandat 656.901 kb on + strandat 656.956 kb on + strandat 656.957 kb on + strandat 656.974 kb on + strandat 656.974 kb on + strandat 656.988 kb on + strandat 656.989 kb on + strandat 656.991 kb on + strandat 656.995 kb on + strandat 656.995 kb on + strandat 657.019 kb on + strandat 657.031 kb on + strandat 657.031 kb on + strandat 657.031 kb on + strandat 657.031 kb on + strandat 657.101 kb on + strand, within MPMX26_00619at 657.101 kb on + strand, within MPMX26_00619at 657.114 kb on + strand, within MPMX26_00619at 657.114 kb on + strand, within MPMX26_00619at 657.114 kb on + strand, within MPMX26_00619at 657.114 kb on + strand, within MPMX26_00619at 657.120 kb on + strand, within MPMX26_00619at 657.185 kb on + strand, within MPMX26_00619at 657.229 kb on + strand, within MPMX26_00619at 657.238 kb on + strand, within MPMX26_00619at 657.238 kb on + strand, within MPMX26_00619at 657.248 kb on + strand, within MPMX26_00619at 657.311 kb on + strand, within MPMX26_00619at 657.322 kb on + strand, within MPMX26_00619at 657.365 kb on + strand, within MPMX26_00619at 657.415 kb on + strand, within MPMX26_00619at 657.426 kb on + strand, within MPMX26_00619at 657.447 kb on + strand, within MPMX26_00619at 657.452 kb on + strand, within MPMX26_00619at 657.489 kb on + strand, within MPMX26_00619at 657.537 kb on + strand, within MPMX26_00619at 657.622 kb on + strand, within MPMX26_00619at 657.623 kb on + strand, within MPMX26_00619at 657.631 kb on + strand, within MPMX26_00619at 657.650 kb on + strand, within MPMX26_00619at 657.655 kb on + strand, within MPMX26_00619at 657.655 kb on + strand, within MPMX26_00619at 657.655 kb on + strand, within MPMX26_00619at 657.655 kb on + strand, within MPMX26_00619at 657.655 kb on + strand, within MPMX26_00619at 657.655 kb on + strand, within MPMX26_00619at 657.655 kb on + strand, within MPMX26_00619at 657.655 kb on + strand, within MPMX26_00619at 657.660 kb on + strand, within MPMX26_00619at 657.669 kb on + strand, within MPMX26_00619at 657.674 kb on + strand, within MPMX26_00619at 657.683 kb on + strand, within MPMX26_00619at 657.697 kb on + strand, within MPMX26_00619at 657.715 kb on + strand, within MPMX26_00619at 657.726 kb on + strand, within MPMX26_00619at 657.748 kb on + strand, within MPMX26_00619at 657.751 kb on + strand, within MPMX26_00619at 657.765 kb on + strand, within MPMX26_00619at 657.803 kb on + strand, within MPMX26_00619at 657.815 kb on + strand, within MPMX26_00619at 657.815 kb on + strand, within MPMX26_00619at 657.815 kb on + strand, within MPMX26_00619

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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653,661 + -0.7
653,669 - -0.7
653,669 - -0.5
653,669 - -1.0
653,697 - +0.1
653,700 - -2.0
653,702 + -0.6
653,702 - +0.9
653,702 - -1.4
653,710 - +0.4
653,710 - -0.7
653,715 - -0.4
653,779 + -0.5
653,809 - -0.4
653,839 - +0.6
654,016 - -0.3
654,017 - -0.8
654,017 - -0.1
654,017 - +0.0
654,017 - -0.7
654,017 - -0.5
654,103 - MPMX26_00617 0.18 -1.8
654,103 - MPMX26_00617 0.18 -0.2
654,103 - MPMX26_00617 0.18 -1.1
654,112 - MPMX26_00617 0.20 -0.4
654,236 - MPMX26_00617 0.42 -1.1
654,305 - MPMX26_00617 0.54 +0.0
654,313 - MPMX26_00617 0.55 -1.4
654,313 - MPMX26_00617 0.55 +0.4
654,355 - MPMX26_00617 0.63 -0.7
654,355 - MPMX26_00617 0.63 -0.4
654,355 - MPMX26_00617 0.63 -1.2
654,355 - MPMX26_00617 0.63 -1.5
654,355 - MPMX26_00617 0.63 -1.1
654,355 - MPMX26_00617 0.63 -0.2
654,355 - MPMX26_00617 0.63 -1.0
654,502 - MPMX26_00617 0.89 -1.0
654,502 - MPMX26_00617 0.89 -0.3
654,542 - -2.6
654,718 - -0.2
654,718 - +0.6
654,718 - +0.9
654,718 - +0.4
654,777 - -0.7
654,841 - -0.6
654,845 - +0.5
654,855 - +1.1
654,861 - +0.2
654,864 - +0.9
654,897 - MPMX26_00618 0.11 +0.5
655,107 - MPMX26_00618 0.21 -0.1
655,107 - MPMX26_00618 0.21 -0.2
655,107 - MPMX26_00618 0.21 +0.1
655,194 - MPMX26_00618 0.25 +0.0
655,222 - MPMX26_00618 0.26 +0.2
655,243 - MPMX26_00618 0.27 +0.2
655,243 - MPMX26_00618 0.27 +0.6
655,401 - MPMX26_00618 0.35 -0.2
655,414 - MPMX26_00618 0.35 +1.1
655,425 - MPMX26_00618 0.36 +0.5
655,599 - MPMX26_00618 0.44 -0.1
655,599 - MPMX26_00618 0.44 -0.2
655,599 - MPMX26_00618 0.44 +4.0
655,599 - MPMX26_00618 0.44 +0.9
655,599 - MPMX26_00618 0.44 +0.4
655,606 - MPMX26_00618 0.44 +0.2
655,614 - MPMX26_00618 0.44 -0.5
655,629 - MPMX26_00618 0.45 -0.8
655,663 - MPMX26_00618 0.47 -1.1
655,717 - MPMX26_00618 0.49 +0.1
655,812 - MPMX26_00618 0.54 +0.0
655,834 - MPMX26_00618 0.55 +0.2
655,839 - MPMX26_00618 0.55 +0.7
655,974 - MPMX26_00618 0.61 +0.1
655,974 - MPMX26_00618 0.61 +0.7
655,974 - MPMX26_00618 0.61 +0.5
655,974 - MPMX26_00618 0.61 -0.1
656,062 - MPMX26_00618 0.65 +0.4
656,062 - MPMX26_00618 0.65 -0.1
656,140 - MPMX26_00618 0.69 +0.0
656,140 - MPMX26_00618 0.69 +0.0
656,254 - MPMX26_00618 0.74 +0.1
656,254 - MPMX26_00618 0.74 +0.5
656,254 - MPMX26_00618 0.74 -0.0
656,314 - MPMX26_00618 0.77 -0.2
656,314 - MPMX26_00618 0.77 -0.2
656,320 - MPMX26_00618 0.77 +0.4
656,335 - MPMX26_00618 0.78 +1.0
656,369 - MPMX26_00618 0.79 +0.9
656,369 - MPMX26_00618 0.79 -0.0
656,369 - MPMX26_00618 0.79 +1.6
656,369 - MPMX26_00618 0.79 +0.1
656,371 - MPMX26_00618 0.79 -0.8
656,373 - MPMX26_00618 0.79 -0.4
656,373 - MPMX26_00618 0.79 +0.2
656,373 - MPMX26_00618 0.79 +0.2
656,373 - MPMX26_00618 0.79 -0.3
656,373 - MPMX26_00618 0.79 +0.1
656,373 - MPMX26_00618 0.79 -0.2
656,404 - MPMX26_00618 0.81 -0.2
656,408 - MPMX26_00618 0.81 +0.0
656,429 - MPMX26_00618 0.82 +0.0
656,429 - MPMX26_00618 0.82 +1.4
656,429 - MPMX26_00618 0.82 +0.4
656,429 - MPMX26_00618 0.82 -0.2
656,429 - MPMX26_00618 0.82 +1.0
656,429 - MPMX26_00618 0.82 +0.1
656,429 - MPMX26_00618 0.82 -0.5
656,441 - MPMX26_00618 0.83 -0.8
656,441 - MPMX26_00618 0.83 +1.6
656,485 - MPMX26_00618 0.85 +0.4
656,514 - MPMX26_00618 0.86 +0.8
656,519 - MPMX26_00618 0.86 +0.0
656,555 - MPMX26_00618 0.88 +0.6
656,555 - MPMX26_00618 0.88 -0.7
656,565 - MPMX26_00618 0.88 +0.6
656,579 - MPMX26_00618 0.89 +0.6
656,614 - +0.3
656,614 - -0.1
656,623 - -0.0
656,656 - -0.8
656,671 - +0.0
656,671 - +1.0
656,671 - +0.9
656,751 - -0.0
656,768 - +0.4
656,785 - +0.2
656,801 - +0.3
656,901 + +0.4
656,956 + -0.0
656,957 + -0.2
656,974 + +0.3
656,974 + +0.4
656,988 + -0.2
656,989 + -0.3
656,991 + -0.6
656,995 + -0.1
656,995 + -0.0
657,019 + +0.0
657,031 + -0.3
657,031 + +0.1
657,031 + -0.1
657,031 + +0.2
657,101 + MPMX26_00619 0.12 -0.6
657,101 + MPMX26_00619 0.12 +0.3
657,114 + MPMX26_00619 0.13 +0.1
657,114 + MPMX26_00619 0.13 +0.3
657,114 + MPMX26_00619 0.13 +0.1
657,114 + MPMX26_00619 0.13 -0.8
657,120 + MPMX26_00619 0.13 +0.0
657,185 + MPMX26_00619 0.19 -0.6
657,229 + MPMX26_00619 0.22 +0.5
657,238 + MPMX26_00619 0.23 +0.1
657,238 + MPMX26_00619 0.23 +0.5
657,248 + MPMX26_00619 0.24 +0.7
657,311 + MPMX26_00619 0.29 -0.6
657,322 + MPMX26_00619 0.30 -0.1
657,365 + MPMX26_00619 0.34 +0.4
657,415 + MPMX26_00619 0.38 -0.2
657,426 + MPMX26_00619 0.39 -0.6
657,447 + MPMX26_00619 0.40 +0.2
657,452 + MPMX26_00619 0.41 +1.9
657,489 + MPMX26_00619 0.44 -0.1
657,537 + MPMX26_00619 0.48 +0.4
657,622 + MPMX26_00619 0.55 +0.6
657,623 + MPMX26_00619 0.55 +0.4
657,631 + MPMX26_00619 0.56 +0.8
657,650 + MPMX26_00619 0.57 +0.2
657,655 + MPMX26_00619 0.58 -0.1
657,655 + MPMX26_00619 0.58 -0.2
657,655 + MPMX26_00619 0.58 +0.3
657,655 + MPMX26_00619 0.58 -0.2
657,655 + MPMX26_00619 0.58 -0.2
657,655 + MPMX26_00619 0.58 +0.5
657,655 + MPMX26_00619 0.58 -1.2
657,655 + MPMX26_00619 0.58 -0.2
657,660 + MPMX26_00619 0.58 +0.3
657,669 + MPMX26_00619 0.59 -0.3
657,674 + MPMX26_00619 0.59 -0.1
657,683 + MPMX26_00619 0.60 +0.5
657,697 + MPMX26_00619 0.61 -0.1
657,715 + MPMX26_00619 0.63 -0.3
657,726 + MPMX26_00619 0.63 -0.3
657,748 + MPMX26_00619 0.65 +0.2
657,751 + MPMX26_00619 0.66 -0.7
657,765 + MPMX26_00619 0.67 +0.3
657,803 + MPMX26_00619 0.70 +1.2
657,815 + MPMX26_00619 0.71 +0.2
657,815 + MPMX26_00619 0.71 -0.5
657,815 + MPMX26_00619 0.71 +0.1

Or see this region's nucleotide sequence