Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00614

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00613 and MPMX26_00614 are separated by 149 nucleotidesMPMX26_00614 and MPMX26_00615 overlap by 8 nucleotidesMPMX26_00615 and MPMX26_00616 are separated by 61 nucleotides MPMX26_00613: MPMX26_00613 - Acetyl-CoA:oxalate CoA-transferase, at 647,752 to 648,885 _00613 MPMX26_00614: MPMX26_00614 - Sulfite reductase [ferredoxin], at 649,035 to 650,678 _00614 MPMX26_00615: MPMX26_00615 - hypothetical protein, at 650,671 to 651,162 _00615 MPMX26_00616: MPMX26_00616 - hypothetical protein, at 651,224 to 653,833 _00616 Position (kb) 649 650 651Strain fitness (log2 ratio) -2 -1 0 1at 648.064 kb on + strand, within MPMX26_00613at 649.083 kb on + strandat 649.083 kb on + strandat 649.164 kb on + strandat 649.173 kb on + strandat 649.196 kb on + strandat 649.308 kb on + strand, within MPMX26_00614at 649.363 kb on + strand, within MPMX26_00614at 649.365 kb on + strand, within MPMX26_00614at 649.365 kb on + strand, within MPMX26_00614at 649.588 kb on + strand, within MPMX26_00614at 649.653 kb on + strand, within MPMX26_00614at 649.705 kb on + strand, within MPMX26_00614at 649.705 kb on + strand, within MPMX26_00614at 649.734 kb on + strand, within MPMX26_00614at 649.941 kb on + strand, within MPMX26_00614at 649.961 kb on + strand, within MPMX26_00614at 649.961 kb on + strand, within MPMX26_00614at 649.961 kb on + strand, within MPMX26_00614at 649.990 kb on + strand, within MPMX26_00614at 650.120 kb on + strand, within MPMX26_00614at 650.141 kb on + strand, within MPMX26_00614at 650.257 kb on + strand, within MPMX26_00614at 650.303 kb on + strand, within MPMX26_00614at 650.351 kb on + strand, within MPMX26_00614at 650.353 kb on + strand, within MPMX26_00614at 650.363 kb on + strand, within MPMX26_00614at 650.363 kb on + strand, within MPMX26_00614at 650.479 kb on + strand, within MPMX26_00614at 650.653 kb on + strandat 650.653 kb on + strandat 650.653 kb on + strandat 650.653 kb on + strandat 650.653 kb on + strandat 650.653 kb on + strandat 650.653 kb on + strandat 650.653 kb on + strandat 650.653 kb on + strandat 650.653 kb on + strandat 650.653 kb on + strandat 650.653 kb on + strandat 650.655 kb on + strandat 650.660 kb on + strandat 650.673 kb on + strandat 650.673 kb on + strandat 650.768 kb on + strand, within MPMX26_00615at 650.770 kb on + strand, within MPMX26_00615at 650.778 kb on + strand, within MPMX26_00615at 650.778 kb on + strand, within MPMX26_00615at 650.780 kb on + strand, within MPMX26_00615at 650.789 kb on + strand, within MPMX26_00615at 650.808 kb on + strand, within MPMX26_00615at 650.839 kb on + strand, within MPMX26_00615at 650.839 kb on + strand, within MPMX26_00615at 650.849 kb on + strand, within MPMX26_00615at 650.941 kb on + strand, within MPMX26_00615at 650.944 kb on + strand, within MPMX26_00615at 651.004 kb on + strand, within MPMX26_00615at 651.014 kb on + strand, within MPMX26_00615at 651.014 kb on + strand, within MPMX26_00615at 651.044 kb on + strand, within MPMX26_00615at 651.045 kb on + strand, within MPMX26_00615at 651.055 kb on + strand, within MPMX26_00615at 651.092 kb on + strand, within MPMX26_00615at 651.092 kb on + strand, within MPMX26_00615at 651.106 kb on + strand, within MPMX26_00615at 651.111 kb on + strand, within MPMX26_00615at 651.121 kb on + strandat 651.122 kb on + strandat 651.122 kb on + strandat 651.148 kb on + strandat 651.240 kb on - strandat 651.271 kb on - strandat 651.273 kb on - strandat 651.307 kb on - strandat 651.307 kb on - strandat 651.307 kb on - strandat 651.312 kb on - strandat 651.312 kb on - strandat 651.312 kb on - strandat 651.312 kb on - strandat 651.312 kb on - strandat 651.312 kb on - strandat 651.312 kb on - strandat 651.333 kb on - strandat 651.397 kb on - strandat 651.424 kb on + strandat 651.432 kb on - strandat 651.448 kb on + strandat 651.451 kb on - strandat 651.451 kb on - strandat 651.456 kb on - strandat 651.456 kb on - strandat 651.456 kb on - strandat 651.456 kb on - strandat 651.456 kb on - strandat 651.456 kb on - strandat 651.456 kb on - strandat 651.456 kb on - strandat 651.464 kb on - strandat 651.472 kb on - strandat 651.476 kb on - strandat 651.484 kb on + strandat 651.493 kb on - strand, within MPMX26_00616at 651.497 kb on - strand, within MPMX26_00616at 651.499 kb on + strand, within MPMX26_00616at 651.499 kb on + strand, within MPMX26_00616at 651.507 kb on - strand, within MPMX26_00616at 651.508 kb on + strand, within MPMX26_00616at 651.537 kb on - strand, within MPMX26_00616at 651.553 kb on - strand, within MPMX26_00616at 651.557 kb on + strand, within MPMX26_00616at 651.557 kb on + strand, within MPMX26_00616at 651.557 kb on + strand, within MPMX26_00616at 651.565 kb on + strand, within MPMX26_00616at 651.565 kb on - strand, within MPMX26_00616at 651.565 kb on - strand, within MPMX26_00616at 651.565 kb on - strand, within MPMX26_00616at 651.565 kb on - strand, within MPMX26_00616at 651.573 kb on - strand, within MPMX26_00616at 651.573 kb on - strand, within MPMX26_00616at 651.573 kb on - strand, within MPMX26_00616at 651.573 kb on - strand, within MPMX26_00616at 651.573 kb on - strand, within MPMX26_00616at 651.580 kb on - strand, within MPMX26_00616at 651.587 kb on + strand, within MPMX26_00616at 651.590 kb on - strand, within MPMX26_00616at 651.590 kb on - strand, within MPMX26_00616at 651.590 kb on - strand, within MPMX26_00616at 651.590 kb on - strand, within MPMX26_00616at 651.592 kb on + strand, within MPMX26_00616at 651.595 kb on - strand, within MPMX26_00616at 651.595 kb on - strand, within MPMX26_00616at 651.595 kb on - strand, within MPMX26_00616at 651.595 kb on - strand, within MPMX26_00616at 651.595 kb on - strand, within MPMX26_00616at 651.608 kb on - strand, within MPMX26_00616at 651.649 kb on + strand, within MPMX26_00616

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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648,064 + MPMX26_00613 0.28 +0.6
649,083 + -1.2
649,083 + -0.7
649,164 + -0.9
649,173 + -1.4
649,196 + +0.1
649,308 + MPMX26_00614 0.17 +0.6
649,363 + MPMX26_00614 0.20 -1.2
649,365 + MPMX26_00614 0.20 +0.6
649,365 + MPMX26_00614 0.20 -0.7
649,588 + MPMX26_00614 0.34 +0.3
649,653 + MPMX26_00614 0.38 -1.4
649,705 + MPMX26_00614 0.41 -0.7
649,705 + MPMX26_00614 0.41 +0.3
649,734 + MPMX26_00614 0.43 -1.7
649,941 + MPMX26_00614 0.55 +1.3
649,961 + MPMX26_00614 0.56 -2.2
649,961 + MPMX26_00614 0.56 -0.9
649,961 + MPMX26_00614 0.56 -0.4
649,990 + MPMX26_00614 0.58 -1.5
650,120 + MPMX26_00614 0.66 -1.2
650,141 + MPMX26_00614 0.67 -1.2
650,257 + MPMX26_00614 0.74 -0.6
650,303 + MPMX26_00614 0.77 -0.7
650,351 + MPMX26_00614 0.80 +1.1
650,353 + MPMX26_00614 0.80 +0.1
650,363 + MPMX26_00614 0.81 +1.6
650,363 + MPMX26_00614 0.81 -0.2
650,479 + MPMX26_00614 0.88 -0.9
650,653 + -0.4
650,653 + -0.2
650,653 + -0.0
650,653 + +0.6
650,653 + -0.5
650,653 + +0.1
650,653 + -0.4
650,653 + +0.3
650,653 + -0.1
650,653 + -0.1
650,653 + +1.0
650,653 + -0.7
650,655 + -0.9
650,660 + +0.4
650,673 + -0.9
650,673 + +0.7
650,768 + MPMX26_00615 0.20 -1.1
650,770 + MPMX26_00615 0.20 -1.5
650,778 + MPMX26_00615 0.22 -1.2
650,778 + MPMX26_00615 0.22 -0.7
650,780 + MPMX26_00615 0.22 -0.4
650,789 + MPMX26_00615 0.24 -1.5
650,808 + MPMX26_00615 0.28 +0.1
650,839 + MPMX26_00615 0.34 -1.7
650,839 + MPMX26_00615 0.34 -0.4
650,849 + MPMX26_00615 0.36 +0.1
650,941 + MPMX26_00615 0.55 +0.1
650,944 + MPMX26_00615 0.55 +1.6
651,004 + MPMX26_00615 0.68 +1.1
651,014 + MPMX26_00615 0.70 -0.2
651,014 + MPMX26_00615 0.70 -0.2
651,044 + MPMX26_00615 0.76 -0.3
651,045 + MPMX26_00615 0.76 -0.5
651,055 + MPMX26_00615 0.78 -0.5
651,092 + MPMX26_00615 0.86 +0.0
651,092 + MPMX26_00615 0.86 -0.0
651,106 + MPMX26_00615 0.88 -0.4
651,111 + MPMX26_00615 0.89 +0.2
651,121 + +0.3
651,122 + +0.1
651,122 + -0.1
651,148 + -0.4
651,240 - -1.0
651,271 - -0.4
651,273 - -0.3
651,307 - -0.4
651,307 - -1.4
651,307 - -0.2
651,312 - +0.1
651,312 - +0.1
651,312 - -0.4
651,312 - +0.6
651,312 - -0.2
651,312 - -2.2
651,312 - -0.7
651,333 - -1.3
651,397 - +0.0
651,424 + -0.6
651,432 - -0.0
651,448 + +1.6
651,451 - +0.0
651,451 - -0.1
651,456 - -0.7
651,456 - -0.1
651,456 - -0.7
651,456 - -1.4
651,456 - -1.8
651,456 - -0.7
651,456 - -0.5
651,456 - -0.9
651,464 - -0.6
651,472 - -0.6
651,476 - -0.5
651,484 + -0.5
651,493 - MPMX26_00616 0.10 +0.8
651,497 - MPMX26_00616 0.10 -0.2
651,499 + MPMX26_00616 0.11 -0.4
651,499 + MPMX26_00616 0.11 -0.3
651,507 - MPMX26_00616 0.11 +0.0
651,508 + MPMX26_00616 0.11 -1.9
651,537 - MPMX26_00616 0.12 -0.8
651,553 - MPMX26_00616 0.13 -0.2
651,557 + MPMX26_00616 0.13 +0.4
651,557 + MPMX26_00616 0.13 -0.3
651,557 + MPMX26_00616 0.13 -0.5
651,565 + MPMX26_00616 0.13 -0.4
651,565 - MPMX26_00616 0.13 -0.3
651,565 - MPMX26_00616 0.13 +0.1
651,565 - MPMX26_00616 0.13 -0.1
651,565 - MPMX26_00616 0.13 -0.7
651,573 - MPMX26_00616 0.13 +0.3
651,573 - MPMX26_00616 0.13 -0.1
651,573 - MPMX26_00616 0.13 +0.4
651,573 - MPMX26_00616 0.13 -0.4
651,573 - MPMX26_00616 0.13 -0.3
651,580 - MPMX26_00616 0.14 -0.6
651,587 + MPMX26_00616 0.14 -1.2
651,590 - MPMX26_00616 0.14 -0.9
651,590 - MPMX26_00616 0.14 +0.2
651,590 - MPMX26_00616 0.14 -0.6
651,590 - MPMX26_00616 0.14 +0.6
651,592 + MPMX26_00616 0.14 +0.6
651,595 - MPMX26_00616 0.14 -0.9
651,595 - MPMX26_00616 0.14 +0.3
651,595 - MPMX26_00616 0.14 -0.5
651,595 - MPMX26_00616 0.14 -0.8
651,595 - MPMX26_00616 0.14 +0.5
651,608 - MPMX26_00616 0.15 -0.2
651,649 + MPMX26_00616 0.16 -0.4

Or see this region's nucleotide sequence