Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00442

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00441 and MPMX26_00442 are separated by 173 nucleotidesMPMX26_00442 and MPMX26_00443 are separated by 202 nucleotides MPMX26_00441: MPMX26_00441 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase, at 473,264 to 474,304 _00441 MPMX26_00442: MPMX26_00442 - tRNA-Leu, at 474,478 to 474,564 _00442 MPMX26_00443: MPMX26_00443 - Adaptive-response sensory-kinase SasA, at 474,767 to 476,044 _00443 Position (kb) 474 475Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 473.482 kb on - strand, within MPMX26_00441at 473.487 kb on - strand, within MPMX26_00441at 473.487 kb on - strand, within MPMX26_00441at 473.487 kb on - strand, within MPMX26_00441at 473.487 kb on - strand, within MPMX26_00441at 473.487 kb on - strand, within MPMX26_00441at 473.489 kb on - strand, within MPMX26_00441at 473.518 kb on - strand, within MPMX26_00441at 473.518 kb on - strand, within MPMX26_00441at 473.530 kb on - strand, within MPMX26_00441at 473.544 kb on - strand, within MPMX26_00441at 473.544 kb on - strand, within MPMX26_00441at 473.550 kb on - strand, within MPMX26_00441at 473.550 kb on - strand, within MPMX26_00441at 473.552 kb on - strand, within MPMX26_00441at 473.552 kb on - strand, within MPMX26_00441at 473.552 kb on - strand, within MPMX26_00441at 473.552 kb on - strand, within MPMX26_00441at 473.584 kb on - strand, within MPMX26_00441at 473.584 kb on - strand, within MPMX26_00441at 473.584 kb on - strand, within MPMX26_00441at 473.594 kb on - strand, within MPMX26_00441at 473.604 kb on - strand, within MPMX26_00441at 473.604 kb on - strand, within MPMX26_00441at 473.604 kb on - strand, within MPMX26_00441at 473.604 kb on - strand, within MPMX26_00441at 473.614 kb on - strand, within MPMX26_00441at 473.617 kb on - strand, within MPMX26_00441at 473.625 kb on - strand, within MPMX26_00441at 473.625 kb on - strand, within MPMX26_00441at 473.625 kb on - strand, within MPMX26_00441at 473.625 kb on - strand, within MPMX26_00441at 473.625 kb on - strand, within MPMX26_00441at 473.625 kb on - strand, within MPMX26_00441at 473.625 kb on - strand, within MPMX26_00441at 473.625 kb on - strand, within MPMX26_00441at 473.625 kb on - strand, within MPMX26_00441at 473.625 kb on - strand, within MPMX26_00441at 473.625 kb on - strand, within MPMX26_00441at 473.668 kb on - strand, within MPMX26_00441at 473.696 kb on - strand, within MPMX26_00441at 473.701 kb on - strand, within MPMX26_00441at 473.706 kb on - strand, within MPMX26_00441at 473.706 kb on - strand, within MPMX26_00441at 473.772 kb on - strand, within MPMX26_00441at 473.776 kb on - strand, within MPMX26_00441at 473.787 kb on - strand, within MPMX26_00441at 473.840 kb on - strand, within MPMX26_00441at 473.840 kb on - strand, within MPMX26_00441at 473.850 kb on - strand, within MPMX26_00441at 473.898 kb on - strand, within MPMX26_00441at 473.898 kb on - strand, within MPMX26_00441at 473.943 kb on - strand, within MPMX26_00441at 473.956 kb on - strand, within MPMX26_00441at 473.956 kb on - strand, within MPMX26_00441at 473.956 kb on - strand, within MPMX26_00441at 473.956 kb on - strand, within MPMX26_00441at 473.956 kb on - strand, within MPMX26_00441at 473.956 kb on - strand, within MPMX26_00441at 473.956 kb on - strand, within MPMX26_00441at 473.956 kb on - strand, within MPMX26_00441at 473.956 kb on - strand, within MPMX26_00441at 473.956 kb on - strand, within MPMX26_00441at 473.956 kb on - strand, within MPMX26_00441at 473.956 kb on - strand, within MPMX26_00441at 473.956 kb on - strand, within MPMX26_00441at 473.958 kb on - strand, within MPMX26_00441at 473.958 kb on - strand, within MPMX26_00441at 473.992 kb on - strand, within MPMX26_00441at 474.042 kb on - strand, within MPMX26_00441at 474.044 kb on - strand, within MPMX26_00441at 474.065 kb on - strand, within MPMX26_00441at 474.076 kb on - strand, within MPMX26_00441at 474.113 kb on - strand, within MPMX26_00441at 474.118 kb on - strand, within MPMX26_00441at 474.140 kb on - strand, within MPMX26_00441at 474.202 kb on - strandat 474.231 kb on - strandat 474.232 kb on - strandat 474.239 kb on - strandat 474.239 kb on - strandat 474.239 kb on - strandat 474.239 kb on - strandat 474.239 kb on - strandat 474.239 kb on - strandat 474.239 kb on - strandat 474.239 kb on - strandat 474.239 kb on - strandat 474.239 kb on - strandat 474.249 kb on - strandat 474.249 kb on - strandat 474.249 kb on - strandat 474.249 kb on - strandat 474.249 kb on - strandat 474.249 kb on - strandat 474.249 kb on - strandat 474.249 kb on - strandat 474.249 kb on - strandat 474.249 kb on - strandat 474.249 kb on - strandat 474.249 kb on - strandat 474.249 kb on - strandat 474.249 kb on - strandat 474.249 kb on - strandat 474.257 kb on - strandat 474.452 kb on + strandat 474.454 kb on + strandat 474.454 kb on + strandat 474.454 kb on + strandat 474.454 kb on + strandat 474.454 kb on + strandat 474.454 kb on + strandat 474.454 kb on + strandat 474.454 kb on + strandat 474.454 kb on + strandat 474.454 kb on + strandat 474.454 kb on + strandat 474.454 kb on + strandat 474.454 kb on + strandat 474.454 kb on + strandat 474.454 kb on + strandat 474.454 kb on + strandat 474.454 kb on + strandat 474.454 kb on + strandat 474.454 kb on + strandat 474.454 kb on + strandat 474.454 kb on + strandat 474.454 kb on + strandat 474.454 kb on + strandat 474.454 kb on + strandat 474.454 kb on + strandat 474.454 kb on + strandat 474.454 kb on + strandat 474.464 kb on + strandat 474.523 kb on + strand, within MPMX26_00442at 474.527 kb on + strand, within MPMX26_00442at 474.527 kb on + strand, within MPMX26_00442at 474.546 kb on + strand, within MPMX26_00442at 474.546 kb on + strand, within MPMX26_00442at 474.546 kb on + strand, within MPMX26_00442at 474.763 kb on + strandat 474.770 kb on + strandat 474.795 kb on + strandat 474.800 kb on + strandat 474.800 kb on + strandat 474.800 kb on + strandat 474.805 kb on + strandat 474.805 kb on + strandat 474.805 kb on + strandat 474.805 kb on + strandat 474.848 kb on + strandat 474.860 kb on + strandat 474.931 kb on + strand, within MPMX26_00443at 474.931 kb on + strand, within MPMX26_00443at 474.931 kb on + strand, within MPMX26_00443at 474.931 kb on + strand, within MPMX26_00443at 474.958 kb on + strand, within MPMX26_00443at 474.958 kb on + strand, within MPMX26_00443at 474.958 kb on + strand, within MPMX26_00443at 474.958 kb on + strand, within MPMX26_00443at 474.958 kb on + strand, within MPMX26_00443at 474.958 kb on + strand, within MPMX26_00443at 474.960 kb on + strand, within MPMX26_00443at 474.960 kb on + strand, within MPMX26_00443at 475.013 kb on + strand, within MPMX26_00443at 475.018 kb on + strand, within MPMX26_00443at 475.018 kb on + strand, within MPMX26_00443at 475.018 kb on + strand, within MPMX26_00443at 475.023 kb on + strand, within MPMX26_00443at 475.079 kb on + strand, within MPMX26_00443at 475.079 kb on + strand, within MPMX26_00443at 475.080 kb on + strand, within MPMX26_00443at 475.103 kb on + strand, within MPMX26_00443at 475.114 kb on + strand, within MPMX26_00443at 475.114 kb on + strand, within MPMX26_00443at 475.114 kb on + strand, within MPMX26_00443at 475.114 kb on + strand, within MPMX26_00443at 475.114 kb on + strand, within MPMX26_00443at 475.114 kb on + strand, within MPMX26_00443at 475.114 kb on + strand, within MPMX26_00443at 475.114 kb on + strand, within MPMX26_00443at 475.114 kb on + strand, within MPMX26_00443at 475.114 kb on + strand, within MPMX26_00443at 475.114 kb on + strand, within MPMX26_00443at 475.114 kb on + strand, within MPMX26_00443at 475.114 kb on + strand, within MPMX26_00443at 475.114 kb on + strand, within MPMX26_00443at 475.164 kb on + strand, within MPMX26_00443at 475.164 kb on + strand, within MPMX26_00443at 475.164 kb on + strand, within MPMX26_00443at 475.165 kb on + strand, within MPMX26_00443at 475.217 kb on + strand, within MPMX26_00443at 475.217 kb on + strand, within MPMX26_00443at 475.217 kb on + strand, within MPMX26_00443at 475.217 kb on + strand, within MPMX26_00443at 475.336 kb on + strand, within MPMX26_00443at 475.377 kb on + strand, within MPMX26_00443at 475.378 kb on + strand, within MPMX26_00443at 475.387 kb on + strand, within MPMX26_00443at 475.405 kb on + strand, within MPMX26_00443at 475.412 kb on + strand, within MPMX26_00443at 475.412 kb on + strand, within MPMX26_00443at 475.412 kb on + strand, within MPMX26_00443at 475.412 kb on + strand, within MPMX26_00443at 475.412 kb on + strand, within MPMX26_00443at 475.435 kb on + strand, within MPMX26_00443at 475.440 kb on + strand, within MPMX26_00443at 475.440 kb on + strand, within MPMX26_00443at 475.440 kb on + strand, within MPMX26_00443at 475.454 kb on + strand, within MPMX26_00443at 475.477 kb on + strand, within MPMX26_00443at 475.546 kb on + strand, within MPMX26_00443

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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473,482 - MPMX26_00441 0.21 -0.4
473,487 - MPMX26_00441 0.21 -0.1
473,487 - MPMX26_00441 0.21 +0.5
473,487 - MPMX26_00441 0.21 -0.5
473,487 - MPMX26_00441 0.21 -0.8
473,487 - MPMX26_00441 0.21 -1.9
473,489 - MPMX26_00441 0.22 -0.2
473,518 - MPMX26_00441 0.24 -1.1
473,518 - MPMX26_00441 0.24 -0.5
473,530 - MPMX26_00441 0.26 -1.2
473,544 - MPMX26_00441 0.27 -0.6
473,544 - MPMX26_00441 0.27 -0.1
473,550 - MPMX26_00441 0.27 +0.8
473,550 - MPMX26_00441 0.27 +0.6
473,552 - MPMX26_00441 0.28 +0.1
473,552 - MPMX26_00441 0.28 -0.2
473,552 - MPMX26_00441 0.28 -0.8
473,552 - MPMX26_00441 0.28 -0.2
473,584 - MPMX26_00441 0.31 +0.3
473,584 - MPMX26_00441 0.31 -0.3
473,584 - MPMX26_00441 0.31 -0.4
473,594 - MPMX26_00441 0.32 -0.4
473,604 - MPMX26_00441 0.33 -0.1
473,604 - MPMX26_00441 0.33 -0.7
473,604 - MPMX26_00441 0.33 -0.3
473,604 - MPMX26_00441 0.33 +0.1
473,614 - MPMX26_00441 0.34 +0.2
473,617 - MPMX26_00441 0.34 -0.6
473,625 - MPMX26_00441 0.35 +2.0
473,625 - MPMX26_00441 0.35 +0.3
473,625 - MPMX26_00441 0.35 -0.1
473,625 - MPMX26_00441 0.35 -1.4
473,625 - MPMX26_00441 0.35 -1.1
473,625 - MPMX26_00441 0.35 +0.1
473,625 - MPMX26_00441 0.35 +0.1
473,625 - MPMX26_00441 0.35 -0.8
473,625 - MPMX26_00441 0.35 +0.5
473,625 - MPMX26_00441 0.35 +0.9
473,625 - MPMX26_00441 0.35 -0.4
473,668 - MPMX26_00441 0.39 -0.9
473,696 - MPMX26_00441 0.41 -0.5
473,701 - MPMX26_00441 0.42 -0.4
473,706 - MPMX26_00441 0.42 +0.5
473,706 - MPMX26_00441 0.42 -0.9
473,772 - MPMX26_00441 0.49 +0.1
473,776 - MPMX26_00441 0.49 -0.1
473,787 - MPMX26_00441 0.50 -0.1
473,840 - MPMX26_00441 0.55 -0.0
473,840 - MPMX26_00441 0.55 +0.7
473,850 - MPMX26_00441 0.56 -0.5
473,898 - MPMX26_00441 0.61 +0.8
473,898 - MPMX26_00441 0.61 -0.5
473,943 - MPMX26_00441 0.65 -0.6
473,956 - MPMX26_00441 0.66 +0.0
473,956 - MPMX26_00441 0.66 -0.3
473,956 - MPMX26_00441 0.66 -0.7
473,956 - MPMX26_00441 0.66 +0.7
473,956 - MPMX26_00441 0.66 +0.3
473,956 - MPMX26_00441 0.66 -0.4
473,956 - MPMX26_00441 0.66 -0.6
473,956 - MPMX26_00441 0.66 +0.3
473,956 - MPMX26_00441 0.66 -0.2
473,956 - MPMX26_00441 0.66 +0.1
473,956 - MPMX26_00441 0.66 +0.1
473,956 - MPMX26_00441 0.66 +0.2
473,956 - MPMX26_00441 0.66 -0.2
473,958 - MPMX26_00441 0.67 -0.4
473,958 - MPMX26_00441 0.67 -0.6
473,992 - MPMX26_00441 0.70 +0.4
474,042 - MPMX26_00441 0.75 -0.4
474,044 - MPMX26_00441 0.75 -0.4
474,065 - MPMX26_00441 0.77 -0.2
474,076 - MPMX26_00441 0.78 +0.1
474,113 - MPMX26_00441 0.82 -0.3
474,118 - MPMX26_00441 0.82 -0.6
474,140 - MPMX26_00441 0.84 +2.4
474,202 - +0.3
474,231 - +0.5
474,232 - -0.2
474,239 - -0.0
474,239 - -0.1
474,239 - -0.9
474,239 - -0.3
474,239 - -0.3
474,239 - -0.0
474,239 - -0.5
474,239 - +0.3
474,239 - +0.2
474,239 - -0.5
474,249 - +0.3
474,249 - -2.3
474,249 - +0.1
474,249 - -0.9
474,249 - +0.5
474,249 - +1.1
474,249 - -0.1
474,249 - -0.3
474,249 - -0.5
474,249 - -1.3
474,249 - +0.3
474,249 - +0.3
474,249 - -0.2
474,249 - -0.4
474,249 - -2.8
474,257 - +0.8
474,452 + -0.3
474,454 + +0.4
474,454 + -0.5
474,454 + -0.5
474,454 + -1.5
474,454 + -0.8
474,454 + -0.9
474,454 + -1.8
474,454 + -1.9
474,454 + -2.5
474,454 + -0.9
474,454 + -0.7
474,454 + -0.2
474,454 + +0.5
474,454 + -1.3
474,454 + +0.3
474,454 + -2.3
474,454 + +1.1
474,454 + -1.0
474,454 + -1.2
474,454 + -0.6
474,454 + -1.4
474,454 + -1.9
474,454 + -1.2
474,454 + -1.3
474,454 + -0.4
474,454 + -0.7
474,454 + +0.3
474,464 + -0.7
474,523 + MPMX26_00442 0.52 -1.9
474,527 + MPMX26_00442 0.56 -2.9
474,527 + MPMX26_00442 0.56 -2.3
474,546 + MPMX26_00442 0.78 -0.5
474,546 + MPMX26_00442 0.78 -1.7
474,546 + MPMX26_00442 0.78 -0.7
474,763 + -0.2
474,770 + +0.1
474,795 + +1.3
474,800 + +0.3
474,800 + +0.5
474,800 + -0.1
474,805 + +0.7
474,805 + -0.2
474,805 + +0.3
474,805 + +0.6
474,848 + +0.0
474,860 + -1.7
474,931 + MPMX26_00443 0.13 +1.0
474,931 + MPMX26_00443 0.13 -0.4
474,931 + MPMX26_00443 0.13 +0.1
474,931 + MPMX26_00443 0.13 +0.5
474,958 + MPMX26_00443 0.15 +0.0
474,958 + MPMX26_00443 0.15 +0.4
474,958 + MPMX26_00443 0.15 +0.5
474,958 + MPMX26_00443 0.15 +0.3
474,958 + MPMX26_00443 0.15 +0.1
474,958 + MPMX26_00443 0.15 +0.6
474,960 + MPMX26_00443 0.15 +0.6
474,960 + MPMX26_00443 0.15 +0.7
475,013 + MPMX26_00443 0.19 -0.3
475,018 + MPMX26_00443 0.20 +0.4
475,018 + MPMX26_00443 0.20 +0.3
475,018 + MPMX26_00443 0.20 -0.1
475,023 + MPMX26_00443 0.20 -0.3
475,079 + MPMX26_00443 0.24 -0.3
475,079 + MPMX26_00443 0.24 +0.4
475,080 + MPMX26_00443 0.24 +0.3
475,103 + MPMX26_00443 0.26 +0.1
475,114 + MPMX26_00443 0.27 -0.1
475,114 + MPMX26_00443 0.27 +0.1
475,114 + MPMX26_00443 0.27 +0.1
475,114 + MPMX26_00443 0.27 +0.5
475,114 + MPMX26_00443 0.27 +0.3
475,114 + MPMX26_00443 0.27 -0.1
475,114 + MPMX26_00443 0.27 +0.4
475,114 + MPMX26_00443 0.27 +0.0
475,114 + MPMX26_00443 0.27 +0.7
475,114 + MPMX26_00443 0.27 +0.1
475,114 + MPMX26_00443 0.27 -0.7
475,114 + MPMX26_00443 0.27 +0.4
475,114 + MPMX26_00443 0.27 -0.4
475,114 + MPMX26_00443 0.27 +0.4
475,164 + MPMX26_00443 0.31 -0.1
475,164 + MPMX26_00443 0.31 +0.5
475,164 + MPMX26_00443 0.31 +0.5
475,165 + MPMX26_00443 0.31 +0.1
475,217 + MPMX26_00443 0.35 +0.1
475,217 + MPMX26_00443 0.35 -0.1
475,217 + MPMX26_00443 0.35 -0.3
475,217 + MPMX26_00443 0.35 -0.1
475,336 + MPMX26_00443 0.45 +0.3
475,377 + MPMX26_00443 0.48 +0.4
475,378 + MPMX26_00443 0.48 -0.5
475,387 + MPMX26_00443 0.49 +0.1
475,405 + MPMX26_00443 0.50 +0.1
475,412 + MPMX26_00443 0.50 +0.5
475,412 + MPMX26_00443 0.50 +0.6
475,412 + MPMX26_00443 0.50 -0.2
475,412 + MPMX26_00443 0.50 +0.5
475,412 + MPMX26_00443 0.50 -0.2
475,435 + MPMX26_00443 0.52 +0.5
475,440 + MPMX26_00443 0.53 +0.7
475,440 + MPMX26_00443 0.53 +0.7
475,440 + MPMX26_00443 0.53 +0.6
475,454 + MPMX26_00443 0.54 +0.1
475,477 + MPMX26_00443 0.56 +0.3
475,546 + MPMX26_00443 0.61 +0.8

Or see this region's nucleotide sequence