Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00427

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00426 and MPMX26_00427 are separated by 24 nucleotidesMPMX26_00427 and MPMX26_00428 overlap by 10 nucleotidesMPMX26_00428 and MPMX26_00429 are separated by 22 nucleotides MPMX26_00426: MPMX26_00426 - Dual-specificity RNA methyltransferase RlmN, at 457,450 to 458,685 _00426 MPMX26_00427: MPMX26_00427 - Lipopolysaccharide assembly protein B, at 458,710 to 459,513 _00427 MPMX26_00428: MPMX26_00428 - Cytoskeleton protein RodZ, at 459,504 to 460,307 _00428 MPMX26_00429: MPMX26_00429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin), at 460,330 to 461,445 _00429 Position (kb) 458 459 460Strain fitness (log2 ratio) -2 -1 0 1at 457.732 kb on + strand, within MPMX26_00426at 457.788 kb on + strand, within MPMX26_00426at 457.798 kb on + strand, within MPMX26_00426at 457.806 kb on + strand, within MPMX26_00426at 457.806 kb on + strand, within MPMX26_00426at 457.806 kb on + strand, within MPMX26_00426at 457.806 kb on + strand, within MPMX26_00426at 457.806 kb on + strand, within MPMX26_00426at 457.806 kb on + strand, within MPMX26_00426at 457.811 kb on + strand, within MPMX26_00426at 457.813 kb on + strand, within MPMX26_00426at 457.821 kb on + strand, within MPMX26_00426at 457.833 kb on + strand, within MPMX26_00426at 457.833 kb on + strand, within MPMX26_00426at 457.860 kb on + strand, within MPMX26_00426at 457.875 kb on + strand, within MPMX26_00426at 457.875 kb on + strand, within MPMX26_00426at 457.875 kb on + strand, within MPMX26_00426at 457.879 kb on + strand, within MPMX26_00426at 457.885 kb on + strand, within MPMX26_00426at 457.885 kb on + strand, within MPMX26_00426at 457.885 kb on + strand, within MPMX26_00426at 457.885 kb on + strand, within MPMX26_00426at 457.885 kb on + strand, within MPMX26_00426at 457.885 kb on + strand, within MPMX26_00426at 457.885 kb on + strand, within MPMX26_00426at 457.885 kb on + strand, within MPMX26_00426at 457.885 kb on + strand, within MPMX26_00426at 457.885 kb on + strand, within MPMX26_00426at 457.885 kb on + strand, within MPMX26_00426at 457.885 kb on + strand, within MPMX26_00426at 457.885 kb on + strand, within MPMX26_00426at 457.885 kb on + strand, within MPMX26_00426at 457.885 kb on + strand, within MPMX26_00426at 457.885 kb on + strand, within MPMX26_00426at 457.885 kb on + strand, within MPMX26_00426at 457.885 kb on + strand, within MPMX26_00426at 457.885 kb on + strand, within MPMX26_00426at 457.885 kb on + strand, within MPMX26_00426at 457.885 kb on + strand, within MPMX26_00426at 457.885 kb on + strand, within MPMX26_00426at 457.885 kb on + strand, within MPMX26_00426at 457.885 kb on + strand, within MPMX26_00426at 457.934 kb on + strand, within MPMX26_00426at 457.962 kb on + strand, within MPMX26_00426at 457.962 kb on + strand, within MPMX26_00426at 457.962 kb on + strand, within MPMX26_00426at 457.962 kb on + strand, within MPMX26_00426at 457.962 kb on + strand, within MPMX26_00426at 457.962 kb on + strand, within MPMX26_00426at 457.962 kb on + strand, within MPMX26_00426at 457.962 kb on + strand, within MPMX26_00426at 457.962 kb on + strand, within MPMX26_00426at 457.962 kb on + strand, within MPMX26_00426at 457.962 kb on + strand, within MPMX26_00426at 457.962 kb on + strand, within MPMX26_00426at 457.962 kb on + strand, within MPMX26_00426at 457.962 kb on + strand, within MPMX26_00426at 457.962 kb on + strand, within MPMX26_00426at 457.980 kb on + strand, within MPMX26_00426at 457.980 kb on + strand, within MPMX26_00426at 457.980 kb on + strand, within MPMX26_00426at 457.998 kb on + strand, within MPMX26_00426at 458.013 kb on + strand, within MPMX26_00426at 458.013 kb on + strand, within MPMX26_00426at 458.013 kb on + strand, within MPMX26_00426at 458.013 kb on + strand, within MPMX26_00426at 458.040 kb on + strand, within MPMX26_00426at 458.077 kb on + strand, within MPMX26_00426at 458.077 kb on + strand, within MPMX26_00426at 458.077 kb on + strand, within MPMX26_00426at 458.088 kb on + strand, within MPMX26_00426at 458.093 kb on + strand, within MPMX26_00426at 458.093 kb on + strand, within MPMX26_00426at 458.093 kb on + strand, within MPMX26_00426at 458.135 kb on + strand, within MPMX26_00426at 458.163 kb on + strand, within MPMX26_00426at 458.163 kb on + strand, within MPMX26_00426at 458.187 kb on + strand, within MPMX26_00426at 458.187 kb on + strand, within MPMX26_00426at 458.195 kb on + strand, within MPMX26_00426at 458.200 kb on + strand, within MPMX26_00426at 458.228 kb on + strand, within MPMX26_00426at 458.228 kb on + strand, within MPMX26_00426at 458.251 kb on + strand, within MPMX26_00426at 458.281 kb on + strand, within MPMX26_00426at 458.283 kb on + strand, within MPMX26_00426at 458.283 kb on + strand, within MPMX26_00426at 458.283 kb on + strand, within MPMX26_00426at 458.301 kb on + strand, within MPMX26_00426at 458.362 kb on + strand, within MPMX26_00426at 458.372 kb on + strand, within MPMX26_00426at 458.384 kb on + strand, within MPMX26_00426at 458.435 kb on + strand, within MPMX26_00426at 458.473 kb on + strand, within MPMX26_00426at 458.473 kb on + strand, within MPMX26_00426at 458.473 kb on + strand, within MPMX26_00426at 458.473 kb on + strand, within MPMX26_00426at 458.473 kb on + strand, within MPMX26_00426at 458.473 kb on + strand, within MPMX26_00426at 458.473 kb on + strand, within MPMX26_00426at 458.473 kb on + strand, within MPMX26_00426at 458.473 kb on + strand, within MPMX26_00426at 458.473 kb on + strand, within MPMX26_00426at 458.488 kb on + strand, within MPMX26_00426at 458.488 kb on + strand, within MPMX26_00426at 458.533 kb on + strand, within MPMX26_00426at 458.533 kb on + strand, within MPMX26_00426at 458.541 kb on + strand, within MPMX26_00426at 458.551 kb on + strand, within MPMX26_00426at 458.556 kb on + strand, within MPMX26_00426at 458.566 kb on + strandat 458.570 kb on + strandat 458.596 kb on + strandat 458.603 kb on + strandat 458.624 kb on + strandat 458.624 kb on + strandat 458.624 kb on + strandat 458.624 kb on + strandat 458.624 kb on + strandat 458.624 kb on + strandat 458.624 kb on + strandat 458.624 kb on + strandat 458.624 kb on + strandat 458.675 kb on + strandat 458.675 kb on + strandat 458.675 kb on + strandat 458.675 kb on + strandat 458.691 kb on + strandat 458.699 kb on + strandat 458.699 kb on + strandat 458.724 kb on + strandat 458.788 kb on + strandat 458.788 kb on + strandat 458.788 kb on + strandat 458.788 kb on + strandat 458.867 kb on + strand, within MPMX26_00427at 458.878 kb on + strand, within MPMX26_00427at 458.902 kb on + strand, within MPMX26_00427at 458.942 kb on + strand, within MPMX26_00427at 458.944 kb on + strand, within MPMX26_00427at 458.952 kb on + strand, within MPMX26_00427at 458.952 kb on + strand, within MPMX26_00427at 458.961 kb on + strand, within MPMX26_00427at 458.977 kb on + strand, within MPMX26_00427at 458.994 kb on + strand, within MPMX26_00427at 459.062 kb on + strand, within MPMX26_00427at 459.072 kb on + strand, within MPMX26_00427at 459.072 kb on + strand, within MPMX26_00427at 459.121 kb on + strand, within MPMX26_00427at 459.121 kb on + strand, within MPMX26_00427at 459.128 kb on + strand, within MPMX26_00427at 459.138 kb on + strand, within MPMX26_00427at 459.138 kb on + strand, within MPMX26_00427at 459.138 kb on + strand, within MPMX26_00427at 459.140 kb on + strand, within MPMX26_00427at 459.223 kb on + strand, within MPMX26_00427at 459.253 kb on + strand, within MPMX26_00427at 459.299 kb on + strand, within MPMX26_00427at 459.299 kb on + strand, within MPMX26_00427at 459.299 kb on + strand, within MPMX26_00427at 459.301 kb on + strand, within MPMX26_00427at 459.301 kb on + strand, within MPMX26_00427at 459.309 kb on + strand, within MPMX26_00427at 459.332 kb on + strand, within MPMX26_00427at 459.332 kb on + strand, within MPMX26_00427at 459.332 kb on + strand, within MPMX26_00427at 459.332 kb on + strand, within MPMX26_00427at 459.332 kb on + strand, within MPMX26_00427at 459.337 kb on + strand, within MPMX26_00427at 459.337 kb on + strand, within MPMX26_00427at 459.345 kb on + strand, within MPMX26_00427at 459.351 kb on + strand, within MPMX26_00427at 459.364 kb on + strand, within MPMX26_00427at 459.410 kb on + strand, within MPMX26_00427at 459.455 kb on + strandat 459.455 kb on + strandat 459.545 kb on + strandat 459.545 kb on + strandat 459.702 kb on + strand, within MPMX26_00428at 459.707 kb on + strand, within MPMX26_00428at 459.707 kb on + strand, within MPMX26_00428at 459.729 kb on + strand, within MPMX26_00428at 459.839 kb on + strand, within MPMX26_00428at 459.839 kb on + strand, within MPMX26_00428at 459.839 kb on + strand, within MPMX26_00428at 459.839 kb on + strand, within MPMX26_00428at 459.839 kb on + strand, within MPMX26_00428at 459.876 kb on + strand, within MPMX26_00428at 459.927 kb on + strand, within MPMX26_00428at 459.956 kb on + strand, within MPMX26_00428at 459.966 kb on + strand, within MPMX26_00428at 459.966 kb on + strand, within MPMX26_00428at 459.966 kb on + strand, within MPMX26_00428at 459.966 kb on + strand, within MPMX26_00428at 460.011 kb on + strand, within MPMX26_00428at 460.011 kb on + strand, within MPMX26_00428at 460.011 kb on + strand, within MPMX26_00428at 460.012 kb on + strand, within MPMX26_00428at 460.012 kb on + strand, within MPMX26_00428at 460.044 kb on + strand, within MPMX26_00428at 460.046 kb on + strand, within MPMX26_00428at 460.052 kb on + strand, within MPMX26_00428at 460.072 kb on + strand, within MPMX26_00428at 460.075 kb on + strand, within MPMX26_00428at 460.103 kb on + strand, within MPMX26_00428at 460.134 kb on + strand, within MPMX26_00428at 460.134 kb on + strand, within MPMX26_00428at 460.140 kb on + strand, within MPMX26_00428at 460.145 kb on + strand, within MPMX26_00428at 460.155 kb on + strand, within MPMX26_00428at 460.160 kb on + strand, within MPMX26_00428at 460.160 kb on + strand, within MPMX26_00428at 460.189 kb on + strand, within MPMX26_00428at 460.189 kb on + strand, within MPMX26_00428at 460.189 kb on + strand, within MPMX26_00428at 460.194 kb on + strand, within MPMX26_00428at 460.222 kb on + strand, within MPMX26_00428at 460.222 kb on + strand, within MPMX26_00428at 460.224 kb on + strand, within MPMX26_00428at 460.224 kb on + strand, within MPMX26_00428at 460.224 kb on + strand, within MPMX26_00428at 460.234 kb on + strandat 460.234 kb on + strandat 460.310 kb on + strandat 460.314 kb on + strandat 460.315 kb on + strandat 460.315 kb on + strandat 460.315 kb on + strandat 460.315 kb on + strandat 460.315 kb on + strandat 460.315 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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457,732 + MPMX26_00426 0.23 -0.6
457,788 + MPMX26_00426 0.27 -0.3
457,798 + MPMX26_00426 0.28 -0.3
457,806 + MPMX26_00426 0.29 -0.1
457,806 + MPMX26_00426 0.29 +0.1
457,806 + MPMX26_00426 0.29 +0.3
457,806 + MPMX26_00426 0.29 -0.3
457,806 + MPMX26_00426 0.29 +0.0
457,806 + MPMX26_00426 0.29 -0.2
457,811 + MPMX26_00426 0.29 -0.6
457,813 + MPMX26_00426 0.29 -0.2
457,821 + MPMX26_00426 0.30 -0.3
457,833 + MPMX26_00426 0.31 -0.6
457,833 + MPMX26_00426 0.31 +0.3
457,860 + MPMX26_00426 0.33 -0.0
457,875 + MPMX26_00426 0.34 +0.1
457,875 + MPMX26_00426 0.34 -0.4
457,875 + MPMX26_00426 0.34 +0.3
457,879 + MPMX26_00426 0.35 -0.3
457,885 + MPMX26_00426 0.35 -0.0
457,885 + MPMX26_00426 0.35 +0.3
457,885 + MPMX26_00426 0.35 -0.4
457,885 + MPMX26_00426 0.35 -0.4
457,885 + MPMX26_00426 0.35 +0.4
457,885 + MPMX26_00426 0.35 +0.0
457,885 + MPMX26_00426 0.35 -0.7
457,885 + MPMX26_00426 0.35 +0.6
457,885 + MPMX26_00426 0.35 -0.6
457,885 + MPMX26_00426 0.35 -1.1
457,885 + MPMX26_00426 0.35 -0.2
457,885 + MPMX26_00426 0.35 -0.2
457,885 + MPMX26_00426 0.35 -1.0
457,885 + MPMX26_00426 0.35 -0.3
457,885 + MPMX26_00426 0.35 +0.4
457,885 + MPMX26_00426 0.35 -1.0
457,885 + MPMX26_00426 0.35 -0.2
457,885 + MPMX26_00426 0.35 -0.3
457,885 + MPMX26_00426 0.35 +0.9
457,885 + MPMX26_00426 0.35 -0.2
457,885 + MPMX26_00426 0.35 -0.2
457,885 + MPMX26_00426 0.35 -1.5
457,885 + MPMX26_00426 0.35 +0.4
457,885 + MPMX26_00426 0.35 +0.7
457,934 + MPMX26_00426 0.39 -0.4
457,962 + MPMX26_00426 0.41 +0.1
457,962 + MPMX26_00426 0.41 +0.0
457,962 + MPMX26_00426 0.41 -0.5
457,962 + MPMX26_00426 0.41 -0.5
457,962 + MPMX26_00426 0.41 -0.2
457,962 + MPMX26_00426 0.41 -0.0
457,962 + MPMX26_00426 0.41 -0.9
457,962 + MPMX26_00426 0.41 -0.6
457,962 + MPMX26_00426 0.41 -0.4
457,962 + MPMX26_00426 0.41 -0.3
457,962 + MPMX26_00426 0.41 +0.6
457,962 + MPMX26_00426 0.41 -0.3
457,962 + MPMX26_00426 0.41 +0.4
457,962 + MPMX26_00426 0.41 +0.2
457,962 + MPMX26_00426 0.41 -0.5
457,980 + MPMX26_00426 0.43 +0.4
457,980 + MPMX26_00426 0.43 +0.2
457,980 + MPMX26_00426 0.43 -0.7
457,998 + MPMX26_00426 0.44 -0.2
458,013 + MPMX26_00426 0.46 -1.3
458,013 + MPMX26_00426 0.46 -0.0
458,013 + MPMX26_00426 0.46 +0.3
458,013 + MPMX26_00426 0.46 +0.7
458,040 + MPMX26_00426 0.48 -0.0
458,077 + MPMX26_00426 0.51 -0.3
458,077 + MPMX26_00426 0.51 -0.1
458,077 + MPMX26_00426 0.51 -0.2
458,088 + MPMX26_00426 0.52 +0.3
458,093 + MPMX26_00426 0.52 +0.4
458,093 + MPMX26_00426 0.52 +0.3
458,093 + MPMX26_00426 0.52 -0.4
458,135 + MPMX26_00426 0.55 -0.0
458,163 + MPMX26_00426 0.58 -0.3
458,163 + MPMX26_00426 0.58 -0.2
458,187 + MPMX26_00426 0.60 +0.2
458,187 + MPMX26_00426 0.60 -0.1
458,195 + MPMX26_00426 0.60 +0.5
458,200 + MPMX26_00426 0.61 -0.4
458,228 + MPMX26_00426 0.63 -0.7
458,228 + MPMX26_00426 0.63 +0.4
458,251 + MPMX26_00426 0.65 -0.6
458,281 + MPMX26_00426 0.67 -0.6
458,283 + MPMX26_00426 0.67 -0.1
458,283 + MPMX26_00426 0.67 -0.7
458,283 + MPMX26_00426 0.67 +0.3
458,301 + MPMX26_00426 0.69 +0.1
458,362 + MPMX26_00426 0.74 +0.6
458,372 + MPMX26_00426 0.75 -0.3
458,384 + MPMX26_00426 0.76 -0.1
458,435 + MPMX26_00426 0.80 +0.3
458,473 + MPMX26_00426 0.83 +0.1
458,473 + MPMX26_00426 0.83 -0.6
458,473 + MPMX26_00426 0.83 -0.2
458,473 + MPMX26_00426 0.83 -0.6
458,473 + MPMX26_00426 0.83 -0.3
458,473 + MPMX26_00426 0.83 -0.7
458,473 + MPMX26_00426 0.83 +0.3
458,473 + MPMX26_00426 0.83 +0.0
458,473 + MPMX26_00426 0.83 -0.4
458,473 + MPMX26_00426 0.83 -0.3
458,488 + MPMX26_00426 0.84 -0.2
458,488 + MPMX26_00426 0.84 +1.7
458,533 + MPMX26_00426 0.88 -0.7
458,533 + MPMX26_00426 0.88 -0.4
458,541 + MPMX26_00426 0.88 -0.0
458,551 + MPMX26_00426 0.89 -0.4
458,556 + MPMX26_00426 0.89 -0.0
458,566 + +0.2
458,570 + -0.1
458,596 + -0.3
458,603 + +0.2
458,624 + -0.1
458,624 + -0.1
458,624 + -0.1
458,624 + +0.4
458,624 + +0.1
458,624 + -0.3
458,624 + +0.0
458,624 + -0.3
458,624 + -0.4
458,675 + +0.3
458,675 + -0.3
458,675 + -0.2
458,675 + -0.4
458,691 + -0.2
458,699 + -0.0
458,699 + -0.0
458,724 + +0.8
458,788 + +0.8
458,788 + +1.2
458,788 + +1.1
458,788 + +1.3
458,867 + MPMX26_00427 0.20 +1.4
458,878 + MPMX26_00427 0.21 +0.9
458,902 + MPMX26_00427 0.24 +1.2
458,942 + MPMX26_00427 0.29 +0.6
458,944 + MPMX26_00427 0.29 +1.0
458,952 + MPMX26_00427 0.30 -0.0
458,952 + MPMX26_00427 0.30 +1.0
458,961 + MPMX26_00427 0.31 +0.7
458,977 + MPMX26_00427 0.33 +1.0
458,994 + MPMX26_00427 0.35 +1.4
459,062 + MPMX26_00427 0.44 +1.0
459,072 + MPMX26_00427 0.45 +1.2
459,072 + MPMX26_00427 0.45 +1.1
459,121 + MPMX26_00427 0.51 +1.2
459,121 + MPMX26_00427 0.51 +0.6
459,128 + MPMX26_00427 0.52 +0.7
459,138 + MPMX26_00427 0.53 +0.6
459,138 + MPMX26_00427 0.53 +0.9
459,138 + MPMX26_00427 0.53 +1.0
459,140 + MPMX26_00427 0.53 +1.3
459,223 + MPMX26_00427 0.64 -0.2
459,253 + MPMX26_00427 0.68 +1.1
459,299 + MPMX26_00427 0.73 -0.4
459,299 + MPMX26_00427 0.73 +0.0
459,299 + MPMX26_00427 0.73 -0.0
459,301 + MPMX26_00427 0.74 +0.1
459,301 + MPMX26_00427 0.74 +1.0
459,309 + MPMX26_00427 0.75 +1.4
459,332 + MPMX26_00427 0.77 +0.1
459,332 + MPMX26_00427 0.77 +0.5
459,332 + MPMX26_00427 0.77 +0.9
459,332 + MPMX26_00427 0.77 +1.1
459,332 + MPMX26_00427 0.77 +0.7
459,337 + MPMX26_00427 0.78 +0.6
459,337 + MPMX26_00427 0.78 +0.8
459,345 + MPMX26_00427 0.79 +0.9
459,351 + MPMX26_00427 0.80 +0.4
459,364 + MPMX26_00427 0.81 +0.8
459,410 + MPMX26_00427 0.87 +1.1
459,455 + -0.9
459,455 + -0.9
459,545 + +0.4
459,545 + -0.3
459,702 + MPMX26_00428 0.25 +0.9
459,707 + MPMX26_00428 0.25 -0.9
459,707 + MPMX26_00428 0.25 -0.3
459,729 + MPMX26_00428 0.28 -0.7
459,839 + MPMX26_00428 0.42 -0.9
459,839 + MPMX26_00428 0.42 -0.5
459,839 + MPMX26_00428 0.42 -1.4
459,839 + MPMX26_00428 0.42 -0.7
459,839 + MPMX26_00428 0.42 +0.1
459,876 + MPMX26_00428 0.46 -1.7
459,927 + MPMX26_00428 0.53 -1.2
459,956 + MPMX26_00428 0.56 -0.2
459,966 + MPMX26_00428 0.57 -1.4
459,966 + MPMX26_00428 0.57 +0.5
459,966 + MPMX26_00428 0.57 -1.5
459,966 + MPMX26_00428 0.57 -1.3
460,011 + MPMX26_00428 0.63 -0.1
460,011 + MPMX26_00428 0.63 -1.3
460,011 + MPMX26_00428 0.63 -0.9
460,012 + MPMX26_00428 0.63 +0.1
460,012 + MPMX26_00428 0.63 -0.9
460,044 + MPMX26_00428 0.67 -1.4
460,046 + MPMX26_00428 0.67 -0.4
460,052 + MPMX26_00428 0.68 -0.9
460,072 + MPMX26_00428 0.71 -0.7
460,075 + MPMX26_00428 0.71 -0.7
460,103 + MPMX26_00428 0.75 -0.9
460,134 + MPMX26_00428 0.78 -1.1
460,134 + MPMX26_00428 0.78 -0.7
460,140 + MPMX26_00428 0.79 -0.4
460,145 + MPMX26_00428 0.80 -1.1
460,155 + MPMX26_00428 0.81 -0.3
460,160 + MPMX26_00428 0.82 -1.1
460,160 + MPMX26_00428 0.82 -0.1
460,189 + MPMX26_00428 0.85 -1.7
460,189 + MPMX26_00428 0.85 -1.1
460,189 + MPMX26_00428 0.85 -1.7
460,194 + MPMX26_00428 0.86 -0.5
460,222 + MPMX26_00428 0.89 -0.9
460,222 + MPMX26_00428 0.89 -0.3
460,224 + MPMX26_00428 0.90 -0.6
460,224 + MPMX26_00428 0.90 -0.3
460,224 + MPMX26_00428 0.90 -0.2
460,234 + +0.5
460,234 + -1.8
460,310 + -0.3
460,314 + -0.1
460,315 + +0.1
460,315 + -0.6
460,315 + +0.1
460,315 + +0.1
460,315 + -0.4
460,315 + -0.5

Or see this region's nucleotide sequence