Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00272

Experiment: UV exposure at 150J/m2 for 20 seconds

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_00271 and MPMX26_00272 overlap by 4 nucleotidesMPMX26_00272 and MPMX26_00273 are separated by 39 nucleotides MPMX26_00271: MPMX26_00271 - RecBCD enzyme subunit RecC, at 292,664 to 296,356 _00271 MPMX26_00272: MPMX26_00272 - RecBCD enzyme subunit RecB, at 296,353 to 300,057 _00272 MPMX26_00273: MPMX26_00273 - RecBCD enzyme subunit RecD, at 300,097 to 301,905 _00273 Position (kb) 296 297 298 299 300 301Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 295.361 kb on + strand, within MPMX26_00271at 295.366 kb on + strand, within MPMX26_00271at 295.501 kb on + strand, within MPMX26_00271at 295.529 kb on + strand, within MPMX26_00271at 295.546 kb on + strand, within MPMX26_00271at 295.547 kb on + strand, within MPMX26_00271at 295.568 kb on + strand, within MPMX26_00271at 295.604 kb on + strand, within MPMX26_00271at 295.604 kb on + strand, within MPMX26_00271at 295.606 kb on + strand, within MPMX26_00271at 295.694 kb on + strand, within MPMX26_00271at 295.730 kb on + strand, within MPMX26_00271at 295.733 kb on + strand, within MPMX26_00271at 295.733 kb on + strand, within MPMX26_00271at 295.773 kb on + strand, within MPMX26_00271at 295.773 kb on + strand, within MPMX26_00271at 295.778 kb on + strand, within MPMX26_00271at 295.792 kb on + strand, within MPMX26_00271at 295.811 kb on + strand, within MPMX26_00271at 295.812 kb on + strand, within MPMX26_00271at 295.830 kb on + strand, within MPMX26_00271at 295.840 kb on + strand, within MPMX26_00271at 295.852 kb on + strand, within MPMX26_00271at 295.946 kb on + strand, within MPMX26_00271at 295.984 kb on + strand, within MPMX26_00271at 296.020 kb on + strandat 296.020 kb on + strandat 296.020 kb on + strandat 296.020 kb on + strandat 296.020 kb on + strandat 296.020 kb on + strandat 296.074 kb on + strandat 296.119 kb on + strandat 296.173 kb on + strandat 296.183 kb on + strandat 296.222 kb on + strandat 296.227 kb on + strandat 296.227 kb on + strandat 296.227 kb on + strandat 296.227 kb on + strandat 296.227 kb on + strandat 296.243 kb on + strandat 296.341 kb on + strandat 296.529 kb on + strandat 296.571 kb on + strandat 296.658 kb on + strandat 296.695 kb on + strandat 296.844 kb on + strand, within MPMX26_00272at 296.844 kb on + strand, within MPMX26_00272at 296.844 kb on + strand, within MPMX26_00272at 296.844 kb on + strand, within MPMX26_00272at 296.844 kb on + strand, within MPMX26_00272at 296.844 kb on + strand, within MPMX26_00272at 296.844 kb on + strand, within MPMX26_00272at 296.844 kb on + strand, within MPMX26_00272at 296.844 kb on + strand, within MPMX26_00272at 296.844 kb on + strand, within MPMX26_00272at 296.844 kb on + strand, within MPMX26_00272at 296.844 kb on + strand, within MPMX26_00272at 296.844 kb on + strand, within MPMX26_00272at 296.844 kb on + strand, within MPMX26_00272at 296.852 kb on - strand, within MPMX26_00272at 296.896 kb on + strand, within MPMX26_00272at 297.000 kb on + strand, within MPMX26_00272at 297.000 kb on + strand, within MPMX26_00272at 297.000 kb on + strand, within MPMX26_00272at 297.039 kb on + strand, within MPMX26_00272at 297.078 kb on + strand, within MPMX26_00272at 297.126 kb on + strand, within MPMX26_00272at 297.126 kb on + strand, within MPMX26_00272at 297.180 kb on + strand, within MPMX26_00272at 297.445 kb on + strand, within MPMX26_00272at 297.531 kb on + strand, within MPMX26_00272at 297.535 kb on + strand, within MPMX26_00272at 297.541 kb on + strand, within MPMX26_00272at 297.556 kb on + strand, within MPMX26_00272at 297.556 kb on + strand, within MPMX26_00272at 297.562 kb on + strand, within MPMX26_00272at 297.562 kb on + strand, within MPMX26_00272at 297.562 kb on + strand, within MPMX26_00272at 297.562 kb on + strand, within MPMX26_00272at 297.621 kb on + strand, within MPMX26_00272at 297.661 kb on + strand, within MPMX26_00272at 297.661 kb on + strand, within MPMX26_00272at 297.664 kb on + strand, within MPMX26_00272at 297.774 kb on + strand, within MPMX26_00272at 297.774 kb on + strand, within MPMX26_00272at 297.774 kb on + strand, within MPMX26_00272at 297.774 kb on + strand, within MPMX26_00272at 297.780 kb on + strand, within MPMX26_00272at 297.780 kb on + strand, within MPMX26_00272at 297.949 kb on + strand, within MPMX26_00272at 297.949 kb on + strand, within MPMX26_00272at 298.104 kb on + strand, within MPMX26_00272at 298.110 kb on + strand, within MPMX26_00272at 298.120 kb on + strand, within MPMX26_00272at 298.120 kb on + strand, within MPMX26_00272at 298.125 kb on + strand, within MPMX26_00272at 298.132 kb on + strand, within MPMX26_00272at 298.132 kb on + strand, within MPMX26_00272at 298.141 kb on + strand, within MPMX26_00272at 298.141 kb on + strand, within MPMX26_00272at 298.141 kb on + strand, within MPMX26_00272at 298.149 kb on + strand, within MPMX26_00272at 298.149 kb on + strand, within MPMX26_00272at 298.149 kb on + strand, within MPMX26_00272at 298.177 kb on + strand, within MPMX26_00272at 298.189 kb on + strand, within MPMX26_00272at 298.215 kb on + strand, within MPMX26_00272at 298.225 kb on + strand, within MPMX26_00272at 298.225 kb on + strand, within MPMX26_00272at 298.237 kb on + strand, within MPMX26_00272at 298.257 kb on + strand, within MPMX26_00272at 298.257 kb on + strand, within MPMX26_00272at 298.257 kb on + strand, within MPMX26_00272at 298.257 kb on + strand, within MPMX26_00272at 298.263 kb on + strand, within MPMX26_00272at 298.324 kb on + strand, within MPMX26_00272at 298.324 kb on + strand, within MPMX26_00272at 298.349 kb on + strand, within MPMX26_00272at 298.411 kb on + strand, within MPMX26_00272at 298.411 kb on + strand, within MPMX26_00272at 298.411 kb on + strand, within MPMX26_00272at 298.413 kb on + strand, within MPMX26_00272at 298.413 kb on + strand, within MPMX26_00272at 298.416 kb on + strand, within MPMX26_00272at 298.513 kb on + strand, within MPMX26_00272at 298.576 kb on + strand, within MPMX26_00272at 298.576 kb on + strand, within MPMX26_00272at 298.576 kb on + strand, within MPMX26_00272at 298.623 kb on + strand, within MPMX26_00272at 298.636 kb on + strand, within MPMX26_00272at 298.637 kb on + strand, within MPMX26_00272at 298.642 kb on + strand, within MPMX26_00272at 298.750 kb on + strand, within MPMX26_00272at 298.758 kb on + strand, within MPMX26_00272at 298.764 kb on + strand, within MPMX26_00272at 298.764 kb on + strand, within MPMX26_00272at 298.764 kb on + strand, within MPMX26_00272at 298.768 kb on + strand, within MPMX26_00272at 298.881 kb on + strand, within MPMX26_00272at 298.891 kb on + strand, within MPMX26_00272at 298.891 kb on + strand, within MPMX26_00272at 298.891 kb on + strand, within MPMX26_00272at 298.891 kb on + strand, within MPMX26_00272at 298.891 kb on + strand, within MPMX26_00272at 298.891 kb on + strand, within MPMX26_00272at 298.891 kb on + strand, within MPMX26_00272at 298.891 kb on + strand, within MPMX26_00272at 298.942 kb on + strand, within MPMX26_00272at 298.948 kb on + strand, within MPMX26_00272at 299.128 kb on + strand, within MPMX26_00272at 299.254 kb on + strand, within MPMX26_00272at 299.466 kb on + strand, within MPMX26_00272at 299.470 kb on + strand, within MPMX26_00272at 299.470 kb on + strand, within MPMX26_00272at 299.470 kb on + strand, within MPMX26_00272at 299.559 kb on + strand, within MPMX26_00272at 299.730 kb on + strandat 299.797 kb on + strandat 299.849 kb on + strandat 299.871 kb on + strandat 299.905 kb on + strandat 299.921 kb on + strandat 299.924 kb on + strandat 299.924 kb on + strandat 299.924 kb on + strandat 299.975 kb on + strandat 300.119 kb on + strandat 300.129 kb on + strandat 300.143 kb on - strandat 300.186 kb on + strandat 300.186 kb on + strandat 300.186 kb on + strandat 300.186 kb on + strandat 300.271 kb on + strandat 300.281 kb on + strand, within MPMX26_00273at 300.281 kb on + strand, within MPMX26_00273at 300.283 kb on + strand, within MPMX26_00273at 300.283 kb on + strand, within MPMX26_00273at 300.286 kb on + strand, within MPMX26_00273at 300.291 kb on + strand, within MPMX26_00273at 300.291 kb on + strand, within MPMX26_00273at 300.292 kb on + strand, within MPMX26_00273at 300.302 kb on + strand, within MPMX26_00273at 300.302 kb on + strand, within MPMX26_00273at 300.302 kb on + strand, within MPMX26_00273at 300.324 kb on + strand, within MPMX26_00273at 300.350 kb on + strand, within MPMX26_00273at 300.369 kb on + strand, within MPMX26_00273at 300.369 kb on + strand, within MPMX26_00273at 300.404 kb on + strand, within MPMX26_00273at 300.404 kb on + strand, within MPMX26_00273at 300.404 kb on + strand, within MPMX26_00273at 300.538 kb on + strand, within MPMX26_00273at 300.602 kb on + strand, within MPMX26_00273at 300.602 kb on + strand, within MPMX26_00273at 300.628 kb on + strand, within MPMX26_00273at 300.654 kb on + strand, within MPMX26_00273at 300.661 kb on + strand, within MPMX26_00273at 300.661 kb on + strand, within MPMX26_00273at 300.678 kb on + strand, within MPMX26_00273at 300.693 kb on + strand, within MPMX26_00273at 300.706 kb on + strand, within MPMX26_00273at 300.706 kb on + strand, within MPMX26_00273at 300.706 kb on + strand, within MPMX26_00273at 300.706 kb on + strand, within MPMX26_00273at 300.758 kb on + strand, within MPMX26_00273at 300.762 kb on + strand, within MPMX26_00273at 300.781 kb on + strand, within MPMX26_00273at 300.781 kb on + strand, within MPMX26_00273at 300.781 kb on + strand, within MPMX26_00273at 300.801 kb on + strand, within MPMX26_00273at 300.801 kb on + strand, within MPMX26_00273at 300.801 kb on + strand, within MPMX26_00273at 300.806 kb on + strand, within MPMX26_00273at 300.846 kb on + strand, within MPMX26_00273at 300.847 kb on + strand, within MPMX26_00273at 300.854 kb on + strand, within MPMX26_00273at 300.907 kb on + strand, within MPMX26_00273at 300.926 kb on + strand, within MPMX26_00273at 300.961 kb on + strand, within MPMX26_00273at 301.006 kb on + strand, within MPMX26_00273at 301.033 kb on + strand, within MPMX26_00273

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
remove
295,361 + MPMX26_00271 0.73 +0.7
295,366 + MPMX26_00271 0.73 -0.3
295,501 + MPMX26_00271 0.77 +0.7
295,529 + MPMX26_00271 0.78 -0.7
295,546 + MPMX26_00271 0.78 -0.9
295,547 + MPMX26_00271 0.78 -2.5
295,568 + MPMX26_00271 0.79 +0.7
295,604 + MPMX26_00271 0.80 +0.3
295,604 + MPMX26_00271 0.80 -0.3
295,606 + MPMX26_00271 0.80 +0.3
295,694 + MPMX26_00271 0.82 -1.5
295,730 + MPMX26_00271 0.83 +1.1
295,733 + MPMX26_00271 0.83 -1.3
295,733 + MPMX26_00271 0.83 +0.7
295,773 + MPMX26_00271 0.84 -0.5
295,773 + MPMX26_00271 0.84 -0.3
295,778 + MPMX26_00271 0.84 +0.1
295,792 + MPMX26_00271 0.85 -0.3
295,811 + MPMX26_00271 0.85 -1.1
295,812 + MPMX26_00271 0.85 +0.7
295,830 + MPMX26_00271 0.86 -0.7
295,840 + MPMX26_00271 0.86 -0.7
295,852 + MPMX26_00271 0.86 -0.8
295,946 + MPMX26_00271 0.89 -0.7
295,984 + MPMX26_00271 0.90 +0.7
296,020 + -0.9
296,020 + -1.3
296,020 + -0.9
296,020 + +0.1
296,020 + +0.1
296,020 + -2.1
296,074 + -0.3
296,119 + +0.7
296,173 + +0.7
296,183 + -0.9
296,222 + -0.1
296,227 + +0.1
296,227 + -1.1
296,227 + +2.7
296,227 + -0.9
296,227 + +0.9
296,243 + -0.9
296,341 + +0.2
296,529 + +0.1
296,571 + +0.1
296,658 + +1.7
296,695 + -0.3
296,844 + MPMX26_00272 0.13 -1.3
296,844 + MPMX26_00272 0.13 -0.3
296,844 + MPMX26_00272 0.13 -0.3
296,844 + MPMX26_00272 0.13 -0.5
296,844 + MPMX26_00272 0.13 -1.1
296,844 + MPMX26_00272 0.13 +0.1
296,844 + MPMX26_00272 0.13 +0.7
296,844 + MPMX26_00272 0.13 +0.1
296,844 + MPMX26_00272 0.13 -0.9
296,844 + MPMX26_00272 0.13 +0.7
296,844 + MPMX26_00272 0.13 -0.5
296,844 + MPMX26_00272 0.13 -0.5
296,844 + MPMX26_00272 0.13 +0.1
296,844 + MPMX26_00272 0.13 -1.1
296,852 - MPMX26_00272 0.13 +1.7
296,896 + MPMX26_00272 0.15 -0.9
297,000 + MPMX26_00272 0.17 +1.1
297,000 + MPMX26_00272 0.17 -1.1
297,000 + MPMX26_00272 0.17 +0.1
297,039 + MPMX26_00272 0.19 -1.3
297,078 + MPMX26_00272 0.20 +0.1
297,126 + MPMX26_00272 0.21 -0.3
297,126 + MPMX26_00272 0.21 -2.1
297,180 + MPMX26_00272 0.22 +0.7
297,445 + MPMX26_00272 0.29 -1.1
297,531 + MPMX26_00272 0.32 +0.3
297,535 + MPMX26_00272 0.32 +0.1
297,541 + MPMX26_00272 0.32 -0.3
297,556 + MPMX26_00272 0.32 +0.7
297,556 + MPMX26_00272 0.32 -0.7
297,562 + MPMX26_00272 0.33 -0.7
297,562 + MPMX26_00272 0.33 -0.9
297,562 + MPMX26_00272 0.33 -1.0
297,562 + MPMX26_00272 0.33 -0.9
297,621 + MPMX26_00272 0.34 -0.3
297,661 + MPMX26_00272 0.35 -0.3
297,661 + MPMX26_00272 0.35 -0.7
297,664 + MPMX26_00272 0.35 -0.3
297,774 + MPMX26_00272 0.38 -0.3
297,774 + MPMX26_00272 0.38 -1.1
297,774 + MPMX26_00272 0.38 +0.1
297,774 + MPMX26_00272 0.38 +1.7
297,780 + MPMX26_00272 0.39 -1.1
297,780 + MPMX26_00272 0.39 -1.1
297,949 + MPMX26_00272 0.43 +0.7
297,949 + MPMX26_00272 0.43 -0.9
298,104 + MPMX26_00272 0.47 +1.7
298,110 + MPMX26_00272 0.47 -1.1
298,120 + MPMX26_00272 0.48 +0.3
298,120 + MPMX26_00272 0.48 +0.7
298,125 + MPMX26_00272 0.48 +0.7
298,132 + MPMX26_00272 0.48 +0.1
298,132 + MPMX26_00272 0.48 +0.1
298,141 + MPMX26_00272 0.48 +1.1
298,141 + MPMX26_00272 0.48 -0.7
298,141 + MPMX26_00272 0.48 -2.4
298,149 + MPMX26_00272 0.48 -0.7
298,149 + MPMX26_00272 0.48 -0.7
298,149 + MPMX26_00272 0.48 +0.3
298,177 + MPMX26_00272 0.49 +0.7
298,189 + MPMX26_00272 0.50 +0.1
298,215 + MPMX26_00272 0.50 +1.7
298,225 + MPMX26_00272 0.51 -0.3
298,225 + MPMX26_00272 0.51 +0.1
298,237 + MPMX26_00272 0.51 -0.9
298,257 + MPMX26_00272 0.51 +0.1
298,257 + MPMX26_00272 0.51 -0.1
298,257 + MPMX26_00272 0.51 +0.1
298,257 + MPMX26_00272 0.51 -0.7
298,263 + MPMX26_00272 0.52 -0.7
298,324 + MPMX26_00272 0.53 -0.3
298,324 + MPMX26_00272 0.53 -0.7
298,349 + MPMX26_00272 0.54 -0.7
298,411 + MPMX26_00272 0.56 +0.3
298,411 + MPMX26_00272 0.56 -1.3
298,411 + MPMX26_00272 0.56 +0.1
298,413 + MPMX26_00272 0.56 +0.1
298,413 + MPMX26_00272 0.56 -0.1
298,416 + MPMX26_00272 0.56 -0.7
298,513 + MPMX26_00272 0.58 -1.1
298,576 + MPMX26_00272 0.60 -0.7
298,576 + MPMX26_00272 0.60 -1.3
298,576 + MPMX26_00272 0.60 +0.7
298,623 + MPMX26_00272 0.61 -0.7
298,636 + MPMX26_00272 0.62 -0.9
298,637 + MPMX26_00272 0.62 -0.7
298,642 + MPMX26_00272 0.62 +1.7
298,750 + MPMX26_00272 0.65 -0.9
298,758 + MPMX26_00272 0.65 +0.1
298,764 + MPMX26_00272 0.65 -0.3
298,764 + MPMX26_00272 0.65 +2.7
298,764 + MPMX26_00272 0.65 +1.7
298,768 + MPMX26_00272 0.65 -1.8
298,881 + MPMX26_00272 0.68 -0.7
298,891 + MPMX26_00272 0.69 -0.7
298,891 + MPMX26_00272 0.69 +0.3
298,891 + MPMX26_00272 0.69 +0.7
298,891 + MPMX26_00272 0.69 +0.1
298,891 + MPMX26_00272 0.69 -0.7
298,891 + MPMX26_00272 0.69 +0.1
298,891 + MPMX26_00272 0.69 +0.7
298,891 + MPMX26_00272 0.69 -0.7
298,942 + MPMX26_00272 0.70 -0.9
298,948 + MPMX26_00272 0.70 -0.3
299,128 + MPMX26_00272 0.75 -1.3
299,254 + MPMX26_00272 0.78 -0.3
299,466 + MPMX26_00272 0.84 -1.3
299,470 + MPMX26_00272 0.84 -0.3
299,470 + MPMX26_00272 0.84 +0.7
299,470 + MPMX26_00272 0.84 +1.7
299,559 + MPMX26_00272 0.87 +1.1
299,730 + -0.7
299,797 + -0.3
299,849 + -0.3
299,871 + +0.1
299,905 + +1.7
299,921 + -0.9
299,924 + -0.7
299,924 + -0.8
299,924 + +1.7
299,975 + +0.1
300,119 + +0.8
300,129 + -0.3
300,143 - -0.3
300,186 + -0.7
300,186 + -1.9
300,186 + -1.0
300,186 + -0.7
300,271 + -1.5
300,281 + MPMX26_00273 0.10 -0.3
300,281 + MPMX26_00273 0.10 -0.3
300,283 + MPMX26_00273 0.10 -0.7
300,283 + MPMX26_00273 0.10 -2.0
300,286 + MPMX26_00273 0.10 -0.7
300,291 + MPMX26_00273 0.11 -0.5
300,291 + MPMX26_00273 0.11 +0.1
300,292 + MPMX26_00273 0.11 -0.6
300,302 + MPMX26_00273 0.11 -0.2
300,302 + MPMX26_00273 0.11 +0.7
300,302 + MPMX26_00273 0.11 -0.3
300,324 + MPMX26_00273 0.13 +0.5
300,350 + MPMX26_00273 0.14 -0.9
300,369 + MPMX26_00273 0.15 -0.7
300,369 + MPMX26_00273 0.15 -1.9
300,404 + MPMX26_00273 0.17 -1.5
300,404 + MPMX26_00273 0.17 +0.1
300,404 + MPMX26_00273 0.17 -0.3
300,538 + MPMX26_00273 0.24 -0.5
300,602 + MPMX26_00273 0.28 -1.5
300,602 + MPMX26_00273 0.28 -2.2
300,628 + MPMX26_00273 0.29 -1.2
300,654 + MPMX26_00273 0.31 -2.8
300,661 + MPMX26_00273 0.31 -1.3
300,661 + MPMX26_00273 0.31 -0.7
300,678 + MPMX26_00273 0.32 -0.2
300,693 + MPMX26_00273 0.33 -1.1
300,706 + MPMX26_00273 0.34 +0.2
300,706 + MPMX26_00273 0.34 -1.7
300,706 + MPMX26_00273 0.34 -0.7
300,706 + MPMX26_00273 0.34 -0.7
300,758 + MPMX26_00273 0.37 -0.3
300,762 + MPMX26_00273 0.37 -2.9
300,781 + MPMX26_00273 0.38 -1.8
300,781 + MPMX26_00273 0.38 -1.3
300,781 + MPMX26_00273 0.38 +0.3
300,801 + MPMX26_00273 0.39 -0.9
300,801 + MPMX26_00273 0.39 -0.9
300,801 + MPMX26_00273 0.39 -0.3
300,806 + MPMX26_00273 0.39 +0.7
300,846 + MPMX26_00273 0.41 -0.6
300,847 + MPMX26_00273 0.41 +0.7
300,854 + MPMX26_00273 0.42 +1.1
300,907 + MPMX26_00273 0.45 -1.5
300,926 + MPMX26_00273 0.46 +0.7
300,961 + MPMX26_00273 0.48 -0.5
301,006 + MPMX26_00273 0.50 +1.7
301,033 + MPMX26_00273 0.52 -2.1

Or see this region's nucleotide sequence