Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00266

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00265 and MPMX26_00266 are separated by 12 nucleotidesMPMX26_00266 and MPMX26_00267 are separated by 13 nucleotides MPMX26_00265: MPMX26_00265 - putative protein kinase UbiB, at 286,179 to 287,798 _00265 MPMX26_00266: MPMX26_00266 - Ubiquinone biosynthesis accessory factor UbiJ, at 287,811 to 288,485 _00266 MPMX26_00267: MPMX26_00267 - 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial, at 288,499 to 289,443 _00267 Position (kb) 287 288 289Strain fitness (log2 ratio) -2 -1 0 1 2 3at 286.814 kb on - strand, within MPMX26_00265at 286.837 kb on - strand, within MPMX26_00265at 286.857 kb on - strand, within MPMX26_00265at 286.857 kb on - strand, within MPMX26_00265at 286.857 kb on - strand, within MPMX26_00265at 286.857 kb on - strand, within MPMX26_00265at 286.857 kb on - strand, within MPMX26_00265at 286.857 kb on - strand, within MPMX26_00265at 286.885 kb on - strand, within MPMX26_00265at 286.886 kb on - strand, within MPMX26_00265at 286.886 kb on - strand, within MPMX26_00265at 286.886 kb on - strand, within MPMX26_00265at 286.886 kb on - strand, within MPMX26_00265at 286.886 kb on - strand, within MPMX26_00265at 286.886 kb on - strand, within MPMX26_00265at 286.886 kb on - strand, within MPMX26_00265at 286.886 kb on - strand, within MPMX26_00265at 286.915 kb on - strand, within MPMX26_00265at 286.915 kb on - strand, within MPMX26_00265at 286.940 kb on - strand, within MPMX26_00265at 286.944 kb on - strand, within MPMX26_00265at 286.946 kb on - strand, within MPMX26_00265at 287.022 kb on - strand, within MPMX26_00265at 287.027 kb on - strand, within MPMX26_00265at 287.027 kb on - strand, within MPMX26_00265at 287.027 kb on - strand, within MPMX26_00265at 287.027 kb on - strand, within MPMX26_00265at 287.027 kb on - strand, within MPMX26_00265at 287.031 kb on - strand, within MPMX26_00265at 287.031 kb on - strand, within MPMX26_00265at 287.041 kb on - strand, within MPMX26_00265at 287.041 kb on - strand, within MPMX26_00265at 287.041 kb on - strand, within MPMX26_00265at 287.042 kb on - strand, within MPMX26_00265at 287.042 kb on - strand, within MPMX26_00265at 287.042 kb on - strand, within MPMX26_00265at 287.042 kb on - strand, within MPMX26_00265at 287.093 kb on - strand, within MPMX26_00265at 287.098 kb on - strand, within MPMX26_00265at 287.098 kb on - strand, within MPMX26_00265at 287.098 kb on - strand, within MPMX26_00265at 287.098 kb on - strand, within MPMX26_00265at 287.098 kb on - strand, within MPMX26_00265at 287.108 kb on - strand, within MPMX26_00265at 287.109 kb on - strand, within MPMX26_00265at 287.112 kb on - strand, within MPMX26_00265at 287.127 kb on - strand, within MPMX26_00265at 287.138 kb on - strand, within MPMX26_00265at 287.188 kb on - strand, within MPMX26_00265at 287.188 kb on - strand, within MPMX26_00265at 287.204 kb on - strand, within MPMX26_00265at 287.209 kb on - strand, within MPMX26_00265at 287.243 kb on + strand, within MPMX26_00265at 287.262 kb on - strand, within MPMX26_00265at 287.262 kb on - strand, within MPMX26_00265at 287.262 kb on - strand, within MPMX26_00265at 287.262 kb on - strand, within MPMX26_00265at 287.287 kb on - strand, within MPMX26_00265at 287.362 kb on - strand, within MPMX26_00265at 287.362 kb on - strand, within MPMX26_00265at 287.362 kb on - strand, within MPMX26_00265at 287.375 kb on - strand, within MPMX26_00265at 287.375 kb on - strand, within MPMX26_00265at 287.380 kb on - strand, within MPMX26_00265at 287.388 kb on - strand, within MPMX26_00265at 287.388 kb on - strand, within MPMX26_00265at 287.388 kb on - strand, within MPMX26_00265at 287.388 kb on - strand, within MPMX26_00265at 287.388 kb on - strand, within MPMX26_00265at 287.388 kb on - strand, within MPMX26_00265at 287.388 kb on - strand, within MPMX26_00265at 287.388 kb on - strand, within MPMX26_00265at 287.388 kb on - strand, within MPMX26_00265at 287.388 kb on - strand, within MPMX26_00265at 287.388 kb on - strand, within MPMX26_00265at 287.388 kb on - strand, within MPMX26_00265at 287.388 kb on - strand, within MPMX26_00265at 287.438 kb on + strand, within MPMX26_00265at 287.446 kb on - strand, within MPMX26_00265at 287.450 kb on - strand, within MPMX26_00265at 287.450 kb on - strand, within MPMX26_00265at 287.450 kb on - strand, within MPMX26_00265at 287.450 kb on - strand, within MPMX26_00265at 287.450 kb on - strand, within MPMX26_00265at 287.450 kb on - strand, within MPMX26_00265at 287.450 kb on - strand, within MPMX26_00265at 287.450 kb on - strand, within MPMX26_00265at 287.508 kb on - strand, within MPMX26_00265at 287.508 kb on - strand, within MPMX26_00265at 287.508 kb on - strand, within MPMX26_00265at 287.508 kb on - strand, within MPMX26_00265at 287.508 kb on - strand, within MPMX26_00265at 287.514 kb on - strand, within MPMX26_00265at 287.520 kb on - strand, within MPMX26_00265at 287.574 kb on - strand, within MPMX26_00265at 287.574 kb on - strand, within MPMX26_00265at 287.658 kb on - strandat 287.673 kb on - strandat 287.698 kb on - strandat 287.708 kb on - strandat 287.708 kb on - strandat 287.737 kb on - strandat 287.753 kb on - strandat 287.753 kb on - strandat 287.753 kb on - strandat 287.753 kb on - strandat 287.759 kb on - strandat 287.760 kb on - strandat 287.763 kb on - strandat 287.787 kb on - strandat 287.787 kb on - strandat 287.800 kb on - strandat 287.800 kb on - strandat 287.802 kb on - strandat 287.802 kb on - strandat 287.804 kb on + strandat 287.812 kb on - strandat 287.838 kb on - strandat 287.838 kb on - strandat 287.838 kb on - strandat 287.838 kb on - strandat 287.844 kb on - strandat 287.856 kb on - strandat 287.887 kb on - strand, within MPMX26_00266at 287.911 kb on - strand, within MPMX26_00266at 287.935 kb on - strand, within MPMX26_00266at 288.032 kb on - strand, within MPMX26_00266at 288.497 kb on - strandat 288.512 kb on - strandat 288.520 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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286,814 - MPMX26_00265 0.39 +0.0
286,837 - MPMX26_00265 0.41 -0.6
286,857 - MPMX26_00265 0.42 +0.4
286,857 - MPMX26_00265 0.42 -0.4
286,857 - MPMX26_00265 0.42 -0.1
286,857 - MPMX26_00265 0.42 -0.4
286,857 - MPMX26_00265 0.42 -0.2
286,857 - MPMX26_00265 0.42 +0.2
286,885 - MPMX26_00265 0.44 -0.2
286,886 - MPMX26_00265 0.44 +0.0
286,886 - MPMX26_00265 0.44 -1.1
286,886 - MPMX26_00265 0.44 +0.2
286,886 - MPMX26_00265 0.44 -0.9
286,886 - MPMX26_00265 0.44 -0.0
286,886 - MPMX26_00265 0.44 +0.8
286,886 - MPMX26_00265 0.44 +0.1
286,886 - MPMX26_00265 0.44 -0.3
286,915 - MPMX26_00265 0.45 +0.0
286,915 - MPMX26_00265 0.45 +0.2
286,940 - MPMX26_00265 0.47 +0.0
286,944 - MPMX26_00265 0.47 -0.2
286,946 - MPMX26_00265 0.47 +0.6
287,022 - MPMX26_00265 0.52 +0.1
287,027 - MPMX26_00265 0.52 +0.0
287,027 - MPMX26_00265 0.52 -0.5
287,027 - MPMX26_00265 0.52 -0.2
287,027 - MPMX26_00265 0.52 -0.4
287,027 - MPMX26_00265 0.52 -0.7
287,031 - MPMX26_00265 0.53 -0.1
287,031 - MPMX26_00265 0.53 -0.0
287,041 - MPMX26_00265 0.53 +0.2
287,041 - MPMX26_00265 0.53 -0.1
287,041 - MPMX26_00265 0.53 +3.0
287,042 - MPMX26_00265 0.53 -0.1
287,042 - MPMX26_00265 0.53 +0.2
287,042 - MPMX26_00265 0.53 +0.3
287,042 - MPMX26_00265 0.53 -1.0
287,093 - MPMX26_00265 0.56 -1.3
287,098 - MPMX26_00265 0.57 +0.1
287,098 - MPMX26_00265 0.57 +0.5
287,098 - MPMX26_00265 0.57 +0.3
287,098 - MPMX26_00265 0.57 -0.9
287,098 - MPMX26_00265 0.57 -2.5
287,108 - MPMX26_00265 0.57 -0.5
287,109 - MPMX26_00265 0.57 -0.4
287,112 - MPMX26_00265 0.58 -0.2
287,127 - MPMX26_00265 0.59 +1.0
287,138 - MPMX26_00265 0.59 -0.8
287,188 - MPMX26_00265 0.62 +0.5
287,188 - MPMX26_00265 0.62 -0.4
287,204 - MPMX26_00265 0.63 -0.5
287,209 - MPMX26_00265 0.64 -0.9
287,243 + MPMX26_00265 0.66 +1.7
287,262 - MPMX26_00265 0.67 -0.1
287,262 - MPMX26_00265 0.67 -1.0
287,262 - MPMX26_00265 0.67 +0.2
287,262 - MPMX26_00265 0.67 -0.2
287,287 - MPMX26_00265 0.68 +0.5
287,362 - MPMX26_00265 0.73 -0.0
287,362 - MPMX26_00265 0.73 -2.4
287,362 - MPMX26_00265 0.73 +1.0
287,375 - MPMX26_00265 0.74 -0.8
287,375 - MPMX26_00265 0.74 +0.2
287,380 - MPMX26_00265 0.74 +0.5
287,388 - MPMX26_00265 0.75 -0.3
287,388 - MPMX26_00265 0.75 -0.7
287,388 - MPMX26_00265 0.75 +3.2
287,388 - MPMX26_00265 0.75 +0.2
287,388 - MPMX26_00265 0.75 -0.0
287,388 - MPMX26_00265 0.75 +0.0
287,388 - MPMX26_00265 0.75 +0.4
287,388 - MPMX26_00265 0.75 -0.3
287,388 - MPMX26_00265 0.75 -0.0
287,388 - MPMX26_00265 0.75 +0.5
287,388 - MPMX26_00265 0.75 -1.5
287,388 - MPMX26_00265 0.75 -0.1
287,388 - MPMX26_00265 0.75 +0.9
287,438 + MPMX26_00265 0.78 -0.5
287,446 - MPMX26_00265 0.78 -0.1
287,450 - MPMX26_00265 0.78 -0.2
287,450 - MPMX26_00265 0.78 -0.1
287,450 - MPMX26_00265 0.78 -0.4
287,450 - MPMX26_00265 0.78 +1.0
287,450 - MPMX26_00265 0.78 -0.2
287,450 - MPMX26_00265 0.78 +1.0
287,450 - MPMX26_00265 0.78 +0.2
287,450 - MPMX26_00265 0.78 +0.1
287,508 - MPMX26_00265 0.82 -0.1
287,508 - MPMX26_00265 0.82 +0.0
287,508 - MPMX26_00265 0.82 -0.1
287,508 - MPMX26_00265 0.82 -1.0
287,508 - MPMX26_00265 0.82 -0.3
287,514 - MPMX26_00265 0.82 -0.1
287,520 - MPMX26_00265 0.83 +0.0
287,574 - MPMX26_00265 0.86 +0.3
287,574 - MPMX26_00265 0.86 +0.0
287,658 - +0.1
287,673 - -0.4
287,698 - -0.3
287,708 - +1.0
287,708 - +0.4
287,737 - -0.9
287,753 - +0.1
287,753 - +0.4
287,753 - +0.2
287,753 - -0.2
287,759 - -0.1
287,760 - -0.1
287,763 - -0.1
287,787 - +0.6
287,787 - +0.6
287,800 - +0.2
287,800 - +1.3
287,802 - +0.6
287,802 - -0.7
287,804 + +0.4
287,812 - -0.9
287,838 - -0.1
287,838 - +0.1
287,838 - -0.2
287,838 - -0.2
287,844 - -0.9
287,856 - +0.6
287,887 - MPMX26_00266 0.11 -0.1
287,911 - MPMX26_00266 0.15 -0.9
287,935 - MPMX26_00266 0.18 -0.3
288,032 - MPMX26_00266 0.33 -0.8
288,497 - +0.7
288,512 - +0.2
288,520 - -1.5

Or see this region's nucleotide sequence