Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00051

Experiment: UV exposure at 150J/m2 for 20 seconds

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_00050 and MPMX26_00051 are separated by 18 nucleotidesMPMX26_00051 and MPMX26_00052 overlap by 4 nucleotides MPMX26_00050: MPMX26_00050 - UDP-N-acetyl-D-glucosamine 6-dehydrogenase, at 54,703 to 55,980 _00050 MPMX26_00051: MPMX26_00051 - UDP-N-acetylglucosamine 4-epimerase, at 55,999 to 57,027 _00051 MPMX26_00052: MPMX26_00052 - Putative O-antigen transporter, at 57,024 to 58,259 _00052 Position (kb) 55 56 57 58Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 54.999 kb on + strand, within MPMX26_00050at 55.016 kb on + strand, within MPMX26_00050at 55.016 kb on + strand, within MPMX26_00050at 55.016 kb on + strand, within MPMX26_00050at 55.016 kb on + strand, within MPMX26_00050at 55.016 kb on + strand, within MPMX26_00050at 55.016 kb on + strand, within MPMX26_00050at 55.016 kb on + strand, within MPMX26_00050at 55.016 kb on + strand, within MPMX26_00050at 55.016 kb on + strand, within MPMX26_00050at 55.016 kb on + strand, within MPMX26_00050at 55.016 kb on + strand, within MPMX26_00050at 55.016 kb on + strand, within MPMX26_00050at 55.016 kb on + strand, within MPMX26_00050at 55.016 kb on + strand, within MPMX26_00050at 55.016 kb on + strand, within MPMX26_00050at 55.016 kb on + strand, within MPMX26_00050at 55.016 kb on + strand, within MPMX26_00050at 55.016 kb on + strand, within MPMX26_00050at 55.016 kb on + strand, within MPMX26_00050at 55.016 kb on + strand, within MPMX26_00050at 55.016 kb on + strand, within MPMX26_00050at 55.068 kb on + strand, within MPMX26_00050at 55.113 kb on + strand, within MPMX26_00050at 55.113 kb on + strand, within MPMX26_00050at 55.113 kb on + strand, within MPMX26_00050at 55.113 kb on + strand, within MPMX26_00050at 55.113 kb on + strand, within MPMX26_00050at 55.113 kb on + strand, within MPMX26_00050at 55.113 kb on + strand, within MPMX26_00050at 55.113 kb on + strand, within MPMX26_00050at 55.120 kb on + strand, within MPMX26_00050at 55.120 kb on + strand, within MPMX26_00050at 55.120 kb on + strand, within MPMX26_00050at 55.120 kb on + strand, within MPMX26_00050at 55.166 kb on + strand, within MPMX26_00050at 55.166 kb on + strand, within MPMX26_00050at 55.183 kb on + strand, within MPMX26_00050at 55.229 kb on + strand, within MPMX26_00050at 55.258 kb on + strand, within MPMX26_00050at 55.258 kb on + strand, within MPMX26_00050at 55.258 kb on + strand, within MPMX26_00050at 55.258 kb on + strand, within MPMX26_00050at 55.282 kb on + strand, within MPMX26_00050at 55.301 kb on + strand, within MPMX26_00050at 55.301 kb on + strand, within MPMX26_00050at 55.301 kb on + strand, within MPMX26_00050at 55.365 kb on + strand, within MPMX26_00050at 55.417 kb on + strand, within MPMX26_00050at 55.417 kb on + strand, within MPMX26_00050at 55.417 kb on + strand, within MPMX26_00050at 55.417 kb on + strand, within MPMX26_00050at 55.417 kb on + strand, within MPMX26_00050at 55.417 kb on + strand, within MPMX26_00050at 55.417 kb on + strand, within MPMX26_00050at 55.417 kb on + strand, within MPMX26_00050at 55.417 kb on + strand, within MPMX26_00050at 55.417 kb on + strand, within MPMX26_00050at 55.417 kb on + strand, within MPMX26_00050at 55.417 kb on + strand, within MPMX26_00050at 55.417 kb on + strand, within MPMX26_00050at 55.417 kb on + strand, within MPMX26_00050at 55.419 kb on + strand, within MPMX26_00050at 55.460 kb on + strand, within MPMX26_00050at 55.465 kb on + strand, within MPMX26_00050at 55.465 kb on + strand, within MPMX26_00050at 55.465 kb on + strand, within MPMX26_00050at 55.465 kb on + strand, within MPMX26_00050at 55.465 kb on + strand, within MPMX26_00050at 55.465 kb on + strand, within MPMX26_00050at 55.482 kb on + strand, within MPMX26_00050at 55.482 kb on + strand, within MPMX26_00050at 55.482 kb on + strand, within MPMX26_00050at 55.482 kb on + strand, within MPMX26_00050at 55.482 kb on + strand, within MPMX26_00050at 55.482 kb on + strand, within MPMX26_00050at 55.484 kb on + strand, within MPMX26_00050at 55.484 kb on + strand, within MPMX26_00050at 55.484 kb on + strand, within MPMX26_00050at 55.524 kb on + strand, within MPMX26_00050at 55.524 kb on + strand, within MPMX26_00050at 55.592 kb on + strand, within MPMX26_00050at 55.605 kb on + strand, within MPMX26_00050at 55.605 kb on + strand, within MPMX26_00050at 55.605 kb on + strand, within MPMX26_00050at 55.735 kb on + strand, within MPMX26_00050at 55.735 kb on + strand, within MPMX26_00050at 55.737 kb on + strand, within MPMX26_00050at 55.756 kb on + strand, within MPMX26_00050at 55.763 kb on + strand, within MPMX26_00050at 55.802 kb on + strand, within MPMX26_00050at 55.802 kb on + strand, within MPMX26_00050at 55.802 kb on + strand, within MPMX26_00050at 55.802 kb on + strand, within MPMX26_00050at 55.802 kb on + strand, within MPMX26_00050at 55.802 kb on + strand, within MPMX26_00050at 55.802 kb on + strand, within MPMX26_00050at 55.802 kb on + strand, within MPMX26_00050at 55.830 kb on + strand, within MPMX26_00050at 55.831 kb on + strand, within MPMX26_00050at 55.836 kb on + strand, within MPMX26_00050at 55.836 kb on + strand, within MPMX26_00050at 55.836 kb on + strand, within MPMX26_00050at 55.836 kb on + strand, within MPMX26_00050at 55.872 kb on + strandat 55.872 kb on + strandat 55.872 kb on + strandat 55.872 kb on + strandat 55.872 kb on + strandat 55.872 kb on + strandat 55.872 kb on + strandat 55.872 kb on + strandat 55.889 kb on + strandat 55.906 kb on + strandat 55.908 kb on + strandat 55.908 kb on + strandat 55.913 kb on + strandat 55.991 kb on + strandat 55.991 kb on + strandat 55.991 kb on + strandat 56.007 kb on + strandat 56.071 kb on + strandat 56.080 kb on + strandat 56.102 kb on + strand, within MPMX26_00051at 56.128 kb on + strand, within MPMX26_00051at 56.189 kb on + strand, within MPMX26_00051at 56.189 kb on + strand, within MPMX26_00051at 56.224 kb on + strand, within MPMX26_00051at 56.224 kb on + strand, within MPMX26_00051at 56.229 kb on + strand, within MPMX26_00051at 56.247 kb on + strand, within MPMX26_00051at 56.247 kb on + strand, within MPMX26_00051at 56.247 kb on + strand, within MPMX26_00051at 56.247 kb on + strand, within MPMX26_00051at 56.247 kb on + strand, within MPMX26_00051at 56.247 kb on + strand, within MPMX26_00051at 56.247 kb on + strand, within MPMX26_00051at 56.247 kb on + strand, within MPMX26_00051at 56.247 kb on + strand, within MPMX26_00051at 56.247 kb on + strand, within MPMX26_00051at 56.249 kb on + strand, within MPMX26_00051at 56.261 kb on + strand, within MPMX26_00051at 56.261 kb on + strand, within MPMX26_00051at 56.278 kb on + strand, within MPMX26_00051at 56.278 kb on + strand, within MPMX26_00051at 56.278 kb on + strand, within MPMX26_00051at 56.278 kb on + strand, within MPMX26_00051at 56.350 kb on + strand, within MPMX26_00051at 56.394 kb on + strand, within MPMX26_00051at 56.394 kb on + strand, within MPMX26_00051at 56.568 kb on + strand, within MPMX26_00051at 56.568 kb on + strand, within MPMX26_00051at 56.573 kb on + strand, within MPMX26_00051at 56.573 kb on + strand, within MPMX26_00051at 56.581 kb on + strand, within MPMX26_00051at 56.639 kb on + strand, within MPMX26_00051at 56.727 kb on + strand, within MPMX26_00051at 56.801 kb on + strand, within MPMX26_00051at 56.801 kb on + strand, within MPMX26_00051at 56.801 kb on + strand, within MPMX26_00051at 56.801 kb on + strand, within MPMX26_00051at 56.801 kb on + strand, within MPMX26_00051at 56.820 kb on + strand, within MPMX26_00051at 56.820 kb on + strand, within MPMX26_00051at 56.889 kb on + strand, within MPMX26_00051at 56.899 kb on + strand, within MPMX26_00051at 56.919 kb on + strand, within MPMX26_00051

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
remove
54,999 + MPMX26_00050 0.23 -0.1
55,016 + MPMX26_00050 0.24 -1.8
55,016 + MPMX26_00050 0.24 -1.1
55,016 + MPMX26_00050 0.24 -0.4
55,016 + MPMX26_00050 0.24 -0.1
55,016 + MPMX26_00050 0.24 +1.2
55,016 + MPMX26_00050 0.24 +0.9
55,016 + MPMX26_00050 0.24 -0.8
55,016 + MPMX26_00050 0.24 -1.1
55,016 + MPMX26_00050 0.24 -1.1
55,016 + MPMX26_00050 0.24 +0.4
55,016 + MPMX26_00050 0.24 -2.7
55,016 + MPMX26_00050 0.24 -0.8
55,016 + MPMX26_00050 0.24 -1.8
55,016 + MPMX26_00050 0.24 -1.9
55,016 + MPMX26_00050 0.24 -1.7
55,016 + MPMX26_00050 0.24 -2.2
55,016 + MPMX26_00050 0.24 -1.9
55,016 + MPMX26_00050 0.24 -0.7
55,016 + MPMX26_00050 0.24 -0.0
55,016 + MPMX26_00050 0.24 -1.3
55,016 + MPMX26_00050 0.24 -0.8
55,068 + MPMX26_00050 0.29 -0.9
55,113 + MPMX26_00050 0.32 -2.1
55,113 + MPMX26_00050 0.32 -0.7
55,113 + MPMX26_00050 0.32 -1.0
55,113 + MPMX26_00050 0.32 -2.0
55,113 + MPMX26_00050 0.32 -1.1
55,113 + MPMX26_00050 0.32 +0.2
55,113 + MPMX26_00050 0.32 -0.4
55,113 + MPMX26_00050 0.32 -0.7
55,120 + MPMX26_00050 0.33 -1.6
55,120 + MPMX26_00050 0.33 -1.7
55,120 + MPMX26_00050 0.33 -2.2
55,120 + MPMX26_00050 0.33 -0.1
55,166 + MPMX26_00050 0.36 -1.1
55,166 + MPMX26_00050 0.36 -1.9
55,183 + MPMX26_00050 0.38 -2.0
55,229 + MPMX26_00050 0.41 -1.6
55,258 + MPMX26_00050 0.43 -2.0
55,258 + MPMX26_00050 0.43 -3.4
55,258 + MPMX26_00050 0.43 -1.8
55,258 + MPMX26_00050 0.43 +0.7
55,282 + MPMX26_00050 0.45 -1.1
55,301 + MPMX26_00050 0.47 -1.3
55,301 + MPMX26_00050 0.47 -1.3
55,301 + MPMX26_00050 0.47 -0.3
55,365 + MPMX26_00050 0.52 -0.1
55,417 + MPMX26_00050 0.56 -1.5
55,417 + MPMX26_00050 0.56 -2.7
55,417 + MPMX26_00050 0.56 -2.4
55,417 + MPMX26_00050 0.56 +0.5
55,417 + MPMX26_00050 0.56 -2.2
55,417 + MPMX26_00050 0.56 -1.1
55,417 + MPMX26_00050 0.56 -1.7
55,417 + MPMX26_00050 0.56 -3.9
55,417 + MPMX26_00050 0.56 -3.5
55,417 + MPMX26_00050 0.56 -1.2
55,417 + MPMX26_00050 0.56 -0.5
55,417 + MPMX26_00050 0.56 -0.8
55,417 + MPMX26_00050 0.56 -1.8
55,417 + MPMX26_00050 0.56 -1.5
55,419 + MPMX26_00050 0.56 +0.1
55,460 + MPMX26_00050 0.59 -2.0
55,465 + MPMX26_00050 0.60 -2.3
55,465 + MPMX26_00050 0.60 +1.1
55,465 + MPMX26_00050 0.60 +0.4
55,465 + MPMX26_00050 0.60 +0.3
55,465 + MPMX26_00050 0.60 -2.7
55,465 + MPMX26_00050 0.60 -2.3
55,482 + MPMX26_00050 0.61 -1.3
55,482 + MPMX26_00050 0.61 -2.7
55,482 + MPMX26_00050 0.61 -1.5
55,482 + MPMX26_00050 0.61 -2.2
55,482 + MPMX26_00050 0.61 -0.5
55,482 + MPMX26_00050 0.61 -1.2
55,484 + MPMX26_00050 0.61 -1.1
55,484 + MPMX26_00050 0.61 -0.2
55,484 + MPMX26_00050 0.61 -1.7
55,524 + MPMX26_00050 0.64 -1.1
55,524 + MPMX26_00050 0.64 -0.3
55,592 + MPMX26_00050 0.70 -0.3
55,605 + MPMX26_00050 0.71 -0.8
55,605 + MPMX26_00050 0.71 -2.1
55,605 + MPMX26_00050 0.71 -2.7
55,735 + MPMX26_00050 0.81 -1.8
55,735 + MPMX26_00050 0.81 -0.7
55,737 + MPMX26_00050 0.81 -2.4
55,756 + MPMX26_00050 0.82 -1.0
55,763 + MPMX26_00050 0.83 -1.3
55,802 + MPMX26_00050 0.86 -0.7
55,802 + MPMX26_00050 0.86 -1.0
55,802 + MPMX26_00050 0.86 -2.3
55,802 + MPMX26_00050 0.86 -3.1
55,802 + MPMX26_00050 0.86 -1.3
55,802 + MPMX26_00050 0.86 -1.2
55,802 + MPMX26_00050 0.86 -3.4
55,802 + MPMX26_00050 0.86 +0.1
55,830 + MPMX26_00050 0.88 -1.5
55,831 + MPMX26_00050 0.88 -0.9
55,836 + MPMX26_00050 0.89 -0.9
55,836 + MPMX26_00050 0.89 -2.4
55,836 + MPMX26_00050 0.89 -0.7
55,836 + MPMX26_00050 0.89 +0.2
55,872 + -1.0
55,872 + -0.1
55,872 + -0.7
55,872 + -2.9
55,872 + -2.3
55,872 + -1.1
55,872 + -2.9
55,872 + -0.9
55,889 + -1.7
55,906 + -1.7
55,908 + -2.0
55,908 + -2.3
55,913 + -2.7
55,991 + -0.6
55,991 + +0.2
55,991 + -0.8
56,007 + -1.1
56,071 + -2.7
56,080 + -2.0
56,102 + MPMX26_00051 0.10 -1.3
56,128 + MPMX26_00051 0.13 -0.7
56,189 + MPMX26_00051 0.18 -2.0
56,189 + MPMX26_00051 0.18 -1.1
56,224 + MPMX26_00051 0.22 -1.8
56,224 + MPMX26_00051 0.22 -0.9
56,229 + MPMX26_00051 0.22 -0.9
56,247 + MPMX26_00051 0.24 -0.3
56,247 + MPMX26_00051 0.24 -3.8
56,247 + MPMX26_00051 0.24 -1.8
56,247 + MPMX26_00051 0.24 -0.6
56,247 + MPMX26_00051 0.24 -0.8
56,247 + MPMX26_00051 0.24 -2.5
56,247 + MPMX26_00051 0.24 -0.8
56,247 + MPMX26_00051 0.24 -3.4
56,247 + MPMX26_00051 0.24 -1.1
56,247 + MPMX26_00051 0.24 -1.2
56,249 + MPMX26_00051 0.24 -1.2
56,261 + MPMX26_00051 0.25 -1.7
56,261 + MPMX26_00051 0.25 -1.1
56,278 + MPMX26_00051 0.27 -1.3
56,278 + MPMX26_00051 0.27 +1.7
56,278 + MPMX26_00051 0.27 -0.8
56,278 + MPMX26_00051 0.27 -1.8
56,350 + MPMX26_00051 0.34 +0.1
56,394 + MPMX26_00051 0.38 -0.9
56,394 + MPMX26_00051 0.38 -0.9
56,568 + MPMX26_00051 0.55 -1.3
56,568 + MPMX26_00051 0.55 -2.6
56,573 + MPMX26_00051 0.56 -0.8
56,573 + MPMX26_00051 0.56 -0.2
56,581 + MPMX26_00051 0.57 -2.2
56,639 + MPMX26_00051 0.62 -1.1
56,727 + MPMX26_00051 0.71 +0.1
56,801 + MPMX26_00051 0.78 -1.0
56,801 + MPMX26_00051 0.78 -0.0
56,801 + MPMX26_00051 0.78 -1.4
56,801 + MPMX26_00051 0.78 -1.8
56,801 + MPMX26_00051 0.78 -0.7
56,820 + MPMX26_00051 0.80 -1.9
56,820 + MPMX26_00051 0.80 -2.0
56,889 + MPMX26_00051 0.86 -1.0
56,899 + MPMX26_00051 0.87 -1.3
56,919 + MPMX26_00051 0.89 -2.1

Or see this region's nucleotide sequence