Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00048

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00047 and MPMX26_00048 are separated by 17 nucleotidesMPMX26_00048 and MPMX26_00049 are separated by 2 nucleotides MPMX26_00047: MPMX26_00047 - Tyrosine-protein kinase ptk, at 50,629 to 52,812 _00047 MPMX26_00048: MPMX26_00048 - Low molecular weight protein-tyrosine-phosphatase Ptp, at 52,830 to 53,258 _00048 MPMX26_00049: MPMX26_00049 - hypothetical protein, at 53,261 to 54,340 _00049 Position (kb) 52 53 54Strain fitness (log2 ratio) -3 -2 -1 0 1at 51.887 kb on - strand, within MPMX26_00047at 51.897 kb on - strand, within MPMX26_00047at 51.934 kb on - strand, within MPMX26_00047at 51.998 kb on - strand, within MPMX26_00047at 52.001 kb on - strand, within MPMX26_00047at 52.003 kb on - strand, within MPMX26_00047at 52.003 kb on - strand, within MPMX26_00047at 52.051 kb on - strand, within MPMX26_00047at 52.051 kb on - strand, within MPMX26_00047at 52.051 kb on - strand, within MPMX26_00047at 52.061 kb on - strand, within MPMX26_00047at 52.061 kb on - strand, within MPMX26_00047at 52.061 kb on - strand, within MPMX26_00047at 52.061 kb on - strand, within MPMX26_00047at 52.061 kb on - strand, within MPMX26_00047at 52.061 kb on - strand, within MPMX26_00047at 52.061 kb on - strand, within MPMX26_00047at 52.061 kb on - strand, within MPMX26_00047at 52.061 kb on - strand, within MPMX26_00047at 52.061 kb on - strand, within MPMX26_00047at 52.061 kb on - strand, within MPMX26_00047at 52.061 kb on - strand, within MPMX26_00047at 52.061 kb on - strand, within MPMX26_00047at 52.063 kb on - strand, within MPMX26_00047at 52.063 kb on - strand, within MPMX26_00047at 52.063 kb on - strand, within MPMX26_00047at 52.063 kb on - strand, within MPMX26_00047at 52.071 kb on - strand, within MPMX26_00047at 52.071 kb on - strand, within MPMX26_00047at 52.076 kb on - strand, within MPMX26_00047at 52.077 kb on - strand, within MPMX26_00047at 52.208 kb on - strand, within MPMX26_00047at 52.249 kb on - strand, within MPMX26_00047at 52.279 kb on - strand, within MPMX26_00047at 52.393 kb on - strand, within MPMX26_00047at 52.421 kb on - strand, within MPMX26_00047at 52.475 kb on - strand, within MPMX26_00047at 52.685 kb on - strandat 52.690 kb on - strandat 52.701 kb on - strandat 52.708 kb on - strandat 52.796 kb on - strandat 52.858 kb on - strandat 52.858 kb on - strandat 52.858 kb on - strandat 52.858 kb on - strandat 52.879 kb on - strand, within MPMX26_00048at 52.879 kb on - strand, within MPMX26_00048at 52.886 kb on - strand, within MPMX26_00048at 52.906 kb on - strand, within MPMX26_00048at 52.944 kb on - strand, within MPMX26_00048at 52.954 kb on - strand, within MPMX26_00048at 52.954 kb on - strand, within MPMX26_00048at 52.980 kb on - strand, within MPMX26_00048at 52.980 kb on - strand, within MPMX26_00048at 52.980 kb on - strand, within MPMX26_00048at 52.980 kb on - strand, within MPMX26_00048at 52.980 kb on - strand, within MPMX26_00048at 52.980 kb on - strand, within MPMX26_00048at 52.980 kb on - strand, within MPMX26_00048at 52.980 kb on - strand, within MPMX26_00048at 53.008 kb on - strand, within MPMX26_00048at 53.008 kb on - strand, within MPMX26_00048at 53.016 kb on - strand, within MPMX26_00048at 53.016 kb on - strand, within MPMX26_00048at 53.016 kb on - strand, within MPMX26_00048at 53.087 kb on - strand, within MPMX26_00048at 53.094 kb on - strand, within MPMX26_00048at 53.094 kb on - strand, within MPMX26_00048at 53.106 kb on - strand, within MPMX26_00048at 53.106 kb on - strand, within MPMX26_00048at 53.111 kb on - strand, within MPMX26_00048at 53.111 kb on - strand, within MPMX26_00048at 53.125 kb on - strand, within MPMX26_00048at 53.312 kb on - strandat 53.344 kb on - strandat 53.358 kb on - strandat 53.363 kb on - strandat 53.445 kb on - strand, within MPMX26_00049at 53.445 kb on - strand, within MPMX26_00049at 53.466 kb on - strand, within MPMX26_00049at 53.490 kb on - strand, within MPMX26_00049at 53.490 kb on - strand, within MPMX26_00049at 53.490 kb on - strand, within MPMX26_00049at 53.523 kb on - strand, within MPMX26_00049at 53.523 kb on - strand, within MPMX26_00049at 53.541 kb on - strand, within MPMX26_00049at 53.542 kb on - strand, within MPMX26_00049at 53.548 kb on - strand, within MPMX26_00049at 53.548 kb on - strand, within MPMX26_00049at 53.548 kb on - strand, within MPMX26_00049at 53.548 kb on - strand, within MPMX26_00049at 53.549 kb on - strand, within MPMX26_00049at 53.549 kb on - strand, within MPMX26_00049at 53.549 kb on - strand, within MPMX26_00049at 53.549 kb on - strand, within MPMX26_00049at 53.549 kb on - strand, within MPMX26_00049at 53.564 kb on - strand, within MPMX26_00049at 53.564 kb on - strand, within MPMX26_00049at 53.590 kb on - strand, within MPMX26_00049at 53.689 kb on - strand, within MPMX26_00049at 53.717 kb on - strand, within MPMX26_00049at 53.745 kb on - strand, within MPMX26_00049at 53.745 kb on - strand, within MPMX26_00049at 53.768 kb on - strand, within MPMX26_00049at 53.782 kb on - strand, within MPMX26_00049at 53.789 kb on - strand, within MPMX26_00049at 53.789 kb on - strand, within MPMX26_00049at 53.789 kb on - strand, within MPMX26_00049at 53.789 kb on - strand, within MPMX26_00049at 53.789 kb on - strand, within MPMX26_00049at 53.789 kb on - strand, within MPMX26_00049at 53.789 kb on - strand, within MPMX26_00049at 53.789 kb on - strand, within MPMX26_00049at 53.789 kb on - strand, within MPMX26_00049at 53.789 kb on - strand, within MPMX26_00049at 53.789 kb on - strand, within MPMX26_00049at 53.789 kb on - strand, within MPMX26_00049at 53.789 kb on - strand, within MPMX26_00049at 53.789 kb on - strand, within MPMX26_00049at 53.789 kb on - strand, within MPMX26_00049at 53.789 kb on - strand, within MPMX26_00049at 53.801 kb on - strand, within MPMX26_00049at 53.836 kb on - strand, within MPMX26_00049at 53.959 kb on - strand, within MPMX26_00049at 53.959 kb on - strand, within MPMX26_00049at 53.959 kb on - strand, within MPMX26_00049at 53.972 kb on - strand, within MPMX26_00049at 54.000 kb on - strand, within MPMX26_00049at 54.024 kb on - strand, within MPMX26_00049at 54.044 kb on - strand, within MPMX26_00049at 54.065 kb on - strand, within MPMX26_00049at 54.071 kb on - strand, within MPMX26_00049at 54.071 kb on - strand, within MPMX26_00049at 54.078 kb on - strand, within MPMX26_00049at 54.096 kb on - strand, within MPMX26_00049at 54.096 kb on - strand, within MPMX26_00049at 54.096 kb on - strand, within MPMX26_00049at 54.096 kb on - strand, within MPMX26_00049at 54.096 kb on - strand, within MPMX26_00049at 54.096 kb on - strand, within MPMX26_00049at 54.136 kb on - strand, within MPMX26_00049at 54.214 kb on - strand, within MPMX26_00049at 54.214 kb on - strand, within MPMX26_00049at 54.214 kb on - strand, within MPMX26_00049at 54.214 kb on - strand, within MPMX26_00049at 54.214 kb on - strand, within MPMX26_00049at 54.214 kb on - strand, within MPMX26_00049at 54.214 kb on - strand, within MPMX26_00049at 54.224 kb on - strand, within MPMX26_00049at 54.236 kb on - strandat 54.236 kb on - strandat 54.236 kb on - strandat 54.240 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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51,887 - MPMX26_00047 0.58 -1.1
51,897 - MPMX26_00047 0.58 -2.3
51,934 - MPMX26_00047 0.60 +0.1
51,998 - MPMX26_00047 0.63 -1.9
52,001 - MPMX26_00047 0.63 -0.9
52,003 - MPMX26_00047 0.63 -1.1
52,003 - MPMX26_00047 0.63 -0.9
52,051 - MPMX26_00047 0.65 +0.7
52,051 - MPMX26_00047 0.65 -0.5
52,051 - MPMX26_00047 0.65 -1.2
52,061 - MPMX26_00047 0.66 -0.9
52,061 - MPMX26_00047 0.66 +0.1
52,061 - MPMX26_00047 0.66 -1.1
52,061 - MPMX26_00047 0.66 -1.7
52,061 - MPMX26_00047 0.66 -1.8
52,061 - MPMX26_00047 0.66 -2.0
52,061 - MPMX26_00047 0.66 -0.9
52,061 - MPMX26_00047 0.66 -1.4
52,061 - MPMX26_00047 0.66 -0.3
52,061 - MPMX26_00047 0.66 -1.3
52,061 - MPMX26_00047 0.66 -0.3
52,061 - MPMX26_00047 0.66 +0.7
52,061 - MPMX26_00047 0.66 +0.7
52,063 - MPMX26_00047 0.66 +0.7
52,063 - MPMX26_00047 0.66 -0.8
52,063 - MPMX26_00047 0.66 -1.5
52,063 - MPMX26_00047 0.66 +0.7
52,071 - MPMX26_00047 0.66 -1.7
52,071 - MPMX26_00047 0.66 -2.0
52,076 - MPMX26_00047 0.66 -2.0
52,077 - MPMX26_00047 0.66 +0.7
52,208 - MPMX26_00047 0.72 -2.2
52,249 - MPMX26_00047 0.74 -1.9
52,279 - MPMX26_00047 0.76 -0.5
52,393 - MPMX26_00047 0.81 -0.7
52,421 - MPMX26_00047 0.82 -1.5
52,475 - MPMX26_00047 0.85 -2.0
52,685 - -0.3
52,690 - +0.7
52,701 - +0.4
52,708 - -3.5
52,796 - +1.1
52,858 - -2.0
52,858 - -2.4
52,858 - -0.3
52,858 - +0.1
52,879 - MPMX26_00048 0.11 -2.3
52,879 - MPMX26_00048 0.11 -1.1
52,886 - MPMX26_00048 0.13 -0.7
52,906 - MPMX26_00048 0.18 -1.2
52,944 - MPMX26_00048 0.27 -2.9
52,954 - MPMX26_00048 0.29 -0.7
52,954 - MPMX26_00048 0.29 +0.7
52,980 - MPMX26_00048 0.35 -3.0
52,980 - MPMX26_00048 0.35 -1.3
52,980 - MPMX26_00048 0.35 -1.7
52,980 - MPMX26_00048 0.35 -1.3
52,980 - MPMX26_00048 0.35 -2.0
52,980 - MPMX26_00048 0.35 -1.8
52,980 - MPMX26_00048 0.35 -2.3
52,980 - MPMX26_00048 0.35 -1.5
53,008 - MPMX26_00048 0.41 -1.7
53,008 - MPMX26_00048 0.41 -0.9
53,016 - MPMX26_00048 0.43 +0.1
53,016 - MPMX26_00048 0.43 -1.3
53,016 - MPMX26_00048 0.43 +0.1
53,087 - MPMX26_00048 0.60 -0.3
53,094 - MPMX26_00048 0.62 -1.1
53,094 - MPMX26_00048 0.62 -3.7
53,106 - MPMX26_00048 0.64 -0.9
53,106 - MPMX26_00048 0.64 -2.1
53,111 - MPMX26_00048 0.66 -0.3
53,111 - MPMX26_00048 0.66 -2.5
53,125 - MPMX26_00048 0.69 -2.8
53,312 - -2.2
53,344 - +0.1
53,358 - +0.7
53,363 - -1.7
53,445 - MPMX26_00049 0.17 -0.1
53,445 - MPMX26_00049 0.17 -1.1
53,466 - MPMX26_00049 0.19 -2.7
53,490 - MPMX26_00049 0.21 -3.0
53,490 - MPMX26_00049 0.21 -0.3
53,490 - MPMX26_00049 0.21 -1.5
53,523 - MPMX26_00049 0.24 +0.1
53,523 - MPMX26_00049 0.24 +0.1
53,541 - MPMX26_00049 0.26 -0.7
53,542 - MPMX26_00049 0.26 -0.7
53,548 - MPMX26_00049 0.27 -3.0
53,548 - MPMX26_00049 0.27 -0.9
53,548 - MPMX26_00049 0.27 -2.8
53,548 - MPMX26_00049 0.27 -1.1
53,549 - MPMX26_00049 0.27 -1.3
53,549 - MPMX26_00049 0.27 -1.0
53,549 - MPMX26_00049 0.27 -1.1
53,549 - MPMX26_00049 0.27 -2.5
53,549 - MPMX26_00049 0.27 -1.1
53,564 - MPMX26_00049 0.28 -2.4
53,564 - MPMX26_00049 0.28 -0.6
53,590 - MPMX26_00049 0.30 -1.1
53,689 - MPMX26_00049 0.40 -1.8
53,717 - MPMX26_00049 0.42 -0.3
53,745 - MPMX26_00049 0.45 -1.0
53,745 - MPMX26_00049 0.45 -2.3
53,768 - MPMX26_00049 0.47 -1.5
53,782 - MPMX26_00049 0.48 -2.4
53,789 - MPMX26_00049 0.49 -1.3
53,789 - MPMX26_00049 0.49 -2.2
53,789 - MPMX26_00049 0.49 -1.1
53,789 - MPMX26_00049 0.49 -0.7
53,789 - MPMX26_00049 0.49 -0.9
53,789 - MPMX26_00049 0.49 -1.1
53,789 - MPMX26_00049 0.49 -2.7
53,789 - MPMX26_00049 0.49 -0.3
53,789 - MPMX26_00049 0.49 -0.3
53,789 - MPMX26_00049 0.49 -1.9
53,789 - MPMX26_00049 0.49 -1.6
53,789 - MPMX26_00049 0.49 -2.1
53,789 - MPMX26_00049 0.49 +0.1
53,789 - MPMX26_00049 0.49 -2.5
53,789 - MPMX26_00049 0.49 -1.0
53,789 - MPMX26_00049 0.49 -2.9
53,801 - MPMX26_00049 0.50 -3.7
53,836 - MPMX26_00049 0.53 -0.9
53,959 - MPMX26_00049 0.65 -2.9
53,959 - MPMX26_00049 0.65 -0.9
53,959 - MPMX26_00049 0.65 -0.3
53,972 - MPMX26_00049 0.66 -1.5
54,000 - MPMX26_00049 0.68 +0.3
54,024 - MPMX26_00049 0.71 -1.9
54,044 - MPMX26_00049 0.72 -0.7
54,065 - MPMX26_00049 0.74 +0.1
54,071 - MPMX26_00049 0.75 -3.2
54,071 - MPMX26_00049 0.75 -0.1
54,078 - MPMX26_00049 0.76 -1.3
54,096 - MPMX26_00049 0.77 -1.7
54,096 - MPMX26_00049 0.77 +0.1
54,096 - MPMX26_00049 0.77 -2.8
54,096 - MPMX26_00049 0.77 -0.8
54,096 - MPMX26_00049 0.77 -1.5
54,096 - MPMX26_00049 0.77 -1.5
54,136 - MPMX26_00049 0.81 -0.7
54,214 - MPMX26_00049 0.88 +0.7
54,214 - MPMX26_00049 0.88 -2.1
54,214 - MPMX26_00049 0.88 -1.8
54,214 - MPMX26_00049 0.88 -1.1
54,214 - MPMX26_00049 0.88 -0.3
54,214 - MPMX26_00049 0.88 -0.5
54,214 - MPMX26_00049 0.88 -1.9
54,224 - MPMX26_00049 0.89 -2.8
54,236 - -0.9
54,236 - -1.3
54,236 - -2.0
54,240 - -2.3

Or see this region's nucleotide sequence