Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06308 and MPMX19_06309 are separated by 590 nucleotides MPMX19_06309 and MPMX19_06310 are separated by 125 nucleotides MPMX19_06310 and MPMX19_06311 are separated by 55 nucleotides
MPMX19_06308: MPMX19_06308 - hypothetical protein, at 71,901 to 72,500
_06308
MPMX19_06309: MPMX19_06309 - hypothetical protein, at 73,091 to 73,396
_06309
MPMX19_06310: MPMX19_06310 - hypothetical protein, at 73,522 to 73,719
_06310
MPMX19_06311: MPMX19_06311 - Serine/threonine-protein kinase toxin HipA, at 73,775 to 75,061
_06311
Position (kb) 73
74 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 72.238 kb on + strand, within MPMX19_06308 at 72.238 kb on + strand, within MPMX19_06308 at 72.238 kb on + strand, within MPMX19_06308 at 72.238 kb on + strand, within MPMX19_06308 at 72.238 kb on + strand, within MPMX19_06308 at 72.238 kb on + strand, within MPMX19_06308 at 72.238 kb on + strand, within MPMX19_06308 at 72.238 kb on + strand, within MPMX19_06308 at 72.238 kb on + strand, within MPMX19_06308 at 72.238 kb on + strand, within MPMX19_06308 at 72.238 kb on + strand, within MPMX19_06308 at 72.238 kb on + strand, within MPMX19_06308 at 72.238 kb on + strand, within MPMX19_06308 at 72.238 kb on + strand, within MPMX19_06308 at 72.238 kb on + strand, within MPMX19_06308 at 72.238 kb on + strand, within MPMX19_06308 at 72.238 kb on + strand, within MPMX19_06308 at 72.238 kb on + strand, within MPMX19_06308 at 72.239 kb on - strand, within MPMX19_06308 at 72.239 kb on - strand, within MPMX19_06308 at 72.239 kb on - strand, within MPMX19_06308 at 72.239 kb on - strand, within MPMX19_06308 at 72.239 kb on - strand, within MPMX19_06308 at 72.239 kb on - strand, within MPMX19_06308 at 72.239 kb on - strand, within MPMX19_06308 at 72.239 kb on - strand, within MPMX19_06308 at 72.239 kb on - strand, within MPMX19_06308 at 72.381 kb on + strand, within MPMX19_06308 at 72.381 kb on + strand, within MPMX19_06308 at 72.381 kb on + strand, within MPMX19_06308 at 72.382 kb on - strand, within MPMX19_06308 at 72.382 kb on - strand, within MPMX19_06308 at 72.382 kb on - strand, within MPMX19_06308 at 72.382 kb on - strand, within MPMX19_06308 at 72.382 kb on - strand, within MPMX19_06308 at 72.382 kb on - strand, within MPMX19_06308 at 72.666 kb on + strand at 72.666 kb on + strand at 72.733 kb on + strand at 72.802 kb on + strand at 72.802 kb on + strand at 72.803 kb on - strand at 72.809 kb on + strand at 72.809 kb on + strand at 73.050 kb on + strand at 73.050 kb on + strand at 73.051 kb on - strand at 73.051 kb on - strand at 73.051 kb on - strand at 73.051 kb on - strand at 73.051 kb on - strand at 73.051 kb on - strand at 73.118 kb on - strand at 73.118 kb on - strand at 73.118 kb on - strand at 73.118 kb on - strand at 73.188 kb on - strand, within MPMX19_06309 at 73.188 kb on - strand, within MPMX19_06309 at 73.188 kb on - strand, within MPMX19_06309 at 73.188 kb on - strand, within MPMX19_06309 at 73.188 kb on - strand, within MPMX19_06309 at 73.188 kb on - strand, within MPMX19_06309 at 73.188 kb on - strand, within MPMX19_06309 at 73.188 kb on - strand, within MPMX19_06309 at 73.238 kb on + strand, within MPMX19_06309 at 73.246 kb on + strand, within MPMX19_06309 at 73.246 kb on + strand, within MPMX19_06309 at 73.448 kb on + strand at 73.449 kb on - strand at 73.475 kb on + strand at 73.475 kb on + strand at 73.475 kb on + strand at 73.475 kb on + strand at 73.476 kb on - strand at 73.476 kb on - strand at 73.491 kb on + strand at 73.501 kb on + strand at 73.501 kb on + strand at 73.501 kb on + strand at 73.502 kb on - strand at 73.502 kb on - strand at 73.538 kb on + strand at 73.538 kb on + strand at 73.539 kb on - strand at 73.539 kb on - strand at 73.568 kb on + strand, within MPMX19_06310 at 74.112 kb on + strand, within MPMX19_06311 at 74.112 kb on + strand, within MPMX19_06311 at 74.113 kb on - strand, within MPMX19_06311 at 74.113 kb on - strand, within MPMX19_06311 at 74.113 kb on - strand, within MPMX19_06311 at 74.113 kb on - strand, within MPMX19_06311 at 74.152 kb on + strand, within MPMX19_06311 at 74.152 kb on + strand, within MPMX19_06311 at 74.153 kb on - strand, within MPMX19_06311 at 74.153 kb on - strand, within MPMX19_06311 at 74.153 kb on - strand, within MPMX19_06311 at 74.153 kb on - strand, within MPMX19_06311 at 74.153 kb on - strand, within MPMX19_06311 at 74.153 kb on - strand, within MPMX19_06311 at 74.153 kb on - strand, within MPMX19_06311 at 74.157 kb on + strand, within MPMX19_06311 at 74.157 kb on + strand, within MPMX19_06311 at 74.157 kb on + strand, within MPMX19_06311 at 74.157 kb on + strand, within MPMX19_06311 at 74.157 kb on + strand, within MPMX19_06311 at 74.157 kb on + strand, within MPMX19_06311 at 74.157 kb on + strand, within MPMX19_06311 at 74.158 kb on - strand, within MPMX19_06311 at 74.158 kb on - strand, within MPMX19_06311 at 74.158 kb on - strand, within MPMX19_06311 at 74.158 kb on - strand, within MPMX19_06311 at 74.158 kb on - strand, within MPMX19_06311 at 74.158 kb on - strand, within MPMX19_06311 at 74.158 kb on - strand, within MPMX19_06311 at 74.158 kb on - strand, within MPMX19_06311 at 74.158 kb on - strand, within MPMX19_06311 at 74.158 kb on - strand, within MPMX19_06311 at 74.310 kb on + strand, within MPMX19_06311 at 74.310 kb on + strand, within MPMX19_06311 at 74.310 kb on + strand, within MPMX19_06311 at 74.311 kb on - strand, within MPMX19_06311 at 74.311 kb on - strand, within MPMX19_06311
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 72,238 + MPMX19_06308 0.56 -0.3 72,238 + MPMX19_06308 0.56 -1.4 72,238 + MPMX19_06308 0.56 -0.5 72,238 + MPMX19_06308 0.56 -0.5 72,238 + MPMX19_06308 0.56 -0.5 72,238 + MPMX19_06308 0.56 -2.5 72,238 + MPMX19_06308 0.56 +0.6 72,238 + MPMX19_06308 0.56 -0.1 72,238 + MPMX19_06308 0.56 +0.2 72,238 + MPMX19_06308 0.56 -0.1 72,238 + MPMX19_06308 0.56 +1.2 72,238 + MPMX19_06308 0.56 -1.0 72,238 + MPMX19_06308 0.56 -0.2 72,238 + MPMX19_06308 0.56 -1.2 72,238 + MPMX19_06308 0.56 -1.5 72,238 + MPMX19_06308 0.56 +0.7 72,238 + MPMX19_06308 0.56 -0.1 72,238 + MPMX19_06308 0.56 +0.2 72,239 - MPMX19_06308 0.56 -1.3 72,239 - MPMX19_06308 0.56 +0.2 72,239 - MPMX19_06308 0.56 -0.6 72,239 - MPMX19_06308 0.56 -1.2 72,239 - MPMX19_06308 0.56 +0.3 72,239 - MPMX19_06308 0.56 +0.3 72,239 - MPMX19_06308 0.56 -1.0 72,239 - MPMX19_06308 0.56 -0.1 72,239 - MPMX19_06308 0.56 -0.4 72,381 + MPMX19_06308 0.80 -1.8 72,381 + MPMX19_06308 0.80 -0.6 72,381 + MPMX19_06308 0.80 +0.6 72,382 - MPMX19_06308 0.80 -0.5 72,382 - MPMX19_06308 0.80 -0.1 72,382 - MPMX19_06308 0.80 +0.3 72,382 - MPMX19_06308 0.80 -0.5 72,382 - MPMX19_06308 0.80 -0.8 72,382 - MPMX19_06308 0.80 +0.0 72,666 + -1.2 72,666 + -0.5 72,733 + +1.5 72,802 + -0.8 72,802 + -0.5 72,803 - -0.7 72,809 + -1.3 72,809 + -1.5 73,050 + +0.3 73,050 + -0.9 73,051 - -0.5 73,051 - -0.3 73,051 - -2.8 73,051 - -0.6 73,051 - -0.0 73,051 - +1.1 73,118 - -0.1 73,118 - -0.5 73,118 - -1.0 73,118 - -1.8 73,188 - MPMX19_06309 0.32 +0.5 73,188 - MPMX19_06309 0.32 -0.7 73,188 - MPMX19_06309 0.32 -0.9 73,188 - MPMX19_06309 0.32 -1.7 73,188 - MPMX19_06309 0.32 -3.2 73,188 - MPMX19_06309 0.32 -0.9 73,188 - MPMX19_06309 0.32 -1.5 73,188 - MPMX19_06309 0.32 +0.2 73,238 + MPMX19_06309 0.48 -0.4 73,246 + MPMX19_06309 0.51 -0.7 73,246 + MPMX19_06309 0.51 -0.8 73,448 + -1.3 73,449 - +0.2 73,475 + -1.2 73,475 + -0.4 73,475 + -1.1 73,475 + -0.2 73,476 - -0.4 73,476 - -1.1 73,491 + +0.9 73,501 + +0.2 73,501 + -0.3 73,501 + -1.3 73,502 - -0.6 73,502 - -0.5 73,538 + -0.3 73,538 + +0.4 73,539 - +0.5 73,539 - -0.1 73,568 + MPMX19_06310 0.23 -1.8 74,112 + MPMX19_06311 0.26 -0.6 74,112 + MPMX19_06311 0.26 +0.6 74,113 - MPMX19_06311 0.26 -2.5 74,113 - MPMX19_06311 0.26 -1.5 74,113 - MPMX19_06311 0.26 -0.7 74,113 - MPMX19_06311 0.26 -0.5 74,152 + MPMX19_06311 0.29 -0.8 74,152 + MPMX19_06311 0.29 -0.9 74,153 - MPMX19_06311 0.29 -1.0 74,153 - MPMX19_06311 0.29 -0.6 74,153 - MPMX19_06311 0.29 -0.5 74,153 - MPMX19_06311 0.29 +0.3 74,153 - MPMX19_06311 0.29 -0.2 74,153 - MPMX19_06311 0.29 +0.7 74,153 - MPMX19_06311 0.29 -0.2 74,157 + MPMX19_06311 0.30 +1.9 74,157 + MPMX19_06311 0.30 +0.5 74,157 + MPMX19_06311 0.30 -0.5 74,157 + MPMX19_06311 0.30 -1.3 74,157 + MPMX19_06311 0.30 -0.7 74,157 + MPMX19_06311 0.30 -1.5 74,157 + MPMX19_06311 0.30 -0.5 74,158 - MPMX19_06311 0.30 -0.2 74,158 - MPMX19_06311 0.30 +1.3 74,158 - MPMX19_06311 0.30 -1.3 74,158 - MPMX19_06311 0.30 -1.4 74,158 - MPMX19_06311 0.30 -0.4 74,158 - MPMX19_06311 0.30 -0.5 74,158 - MPMX19_06311 0.30 -0.2 74,158 - MPMX19_06311 0.30 +0.5 74,158 - MPMX19_06311 0.30 -0.3 74,158 - MPMX19_06311 0.30 -0.9 74,310 + MPMX19_06311 0.42 +0.5 74,310 + MPMX19_06311 0.42 -0.5 74,310 + MPMX19_06311 0.42 -1.8 74,311 - MPMX19_06311 0.42 -1.8 74,311 - MPMX19_06311 0.42 -0.8
Or see this region's nucleotide sequence